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The map label for this gene is 77458271

Identifier: 77458271

GI number: 77458271

Start: 2328822

End: 2330864

Strand: Reverse

Name: 77458271

Synonym: Pfl01_2044

Alternate gene names: NA

Gene position: 2330864-2328822 (Counterclockwise)

Preceding gene: 77458272

Following gene: 77458270

Centisome position: 36.2

GC content: 62.56

Gene sequence:

>2043_bases
ATGTTCGCGCCGGCCAATGAAACCCATTTTGCCCTGACCATCGAAGGTCTTTCCGCCGACTTTCAGGTGTTTACCCTGAC
CGGCCGGGAAGCCATCAGCCAGCCTTTCGTATTCGAGGTGGAGCTGGTCAGTGAGCAGCCGTCGCTGGACCTCGAAACCC
TGCTGCACAAACCGGCCTTCCTGCAGCTGTCGCCCGACGGCAGCGGCATCCACGGCCTGATCTACCGCGCCGCGCAAGGC
GATTCCGGCAAGCGCCTGACGCGCTACTCCGTGACCCTGCGCCCGCAACTGGCGTACCTCGCACACCGAATCAACCAGCG
GATCTTCCAGAACCTCAGCGTGCCGAAAATCATCGGCAAGGTCCTCGAAGAACACGGCATCCAAGGCAACGCCTATGCCT
TCCAGACCGGCTCGATCTACCCCGAGCGCATCTACTGCGTGCAATACGACGAATCGGACCTGCATTTCATCCAGCGCCTG
TGCGAAGAAGAAGGCATTCACTACCACTTCCAGCACAGCGCCACGGGCCACAAACTGGTGTTCGGCGATGACCAGACGGT
GTTCAAGAAACTGGCGCCGGTGGCCTATCAGCAGGACTCCGGCATGGTCGCCAGCGACCCGGTGATCAAACGCTTCGACC
TGCGCCTGGAAACCCGCACCAGCCGCACCACCCGCCGCGACTACGACTTCGAAAAACCGCGCCTGACGCTGGAAAGCGAA
AACCGCGGCGACGCCCTGCCCGACCTCGAGGACTACGATTACCCGGGCCGTTTCGTCGACCGCGAGCGCGGCAAGCACCT
GGCCAAACGCGCCCTCGAACGCCACCGCAGCGACTTCCAGCTCGCCGAAGGCAAGAGCGACCAGCCGTTGCTGGTCAGCG
GCCATTTCCTCGCGCTGAAAGAACACCCGAAGGCCAAGTGGAATGACCTGTGGCTGCTCACCGAAGTCCACCACGAAGGC
AAACAGCCGCAGGTGCTGGAAGAGTCGGTGACCAGTGACACCACCGCGCTCAAAGACGATTTCCATCAGGGCTACCGCAA
CCGCTTCCAGGCCACCCCGTGGGACGTGCCGAACCGCCCGCCCCTGCGCCACCCGAAACCGCGCATCCTCGGCAGCCAGA
GCGCCGTGGTCACCGGCCCTAAAGGTGAAGAAATCCACTGCGACGAATACGGCCGCGTCAAAGTCCAGTTCCACTGGGAC
CGCGACGGCCAGGCCGACGACAAGACCAGTTGCTGGCTGCGCGTGTCTTCAGCCTGGGCCGGCGCCCAGTACGGCGGCAT
CGCCATCCCGCGCATCGGCATGGAAGTGCTGGTCACCTTCCTCGAAGGCGACCCCGACCAGCCGCTGATCAGCGGCTGCC
TGTACCACAAGGAAAACACCGTCCCGTACGCCCTGCCGGCGAATAAGACGCGCACCACCTTCAAGACCCTGAGCTCGATG
GGCGGCGGCGGCTTCAACGAACTGCGCATCGAAGACAAGAAAGGTCAGGAACAGATCTTCCTGCACGCCCAGCGCGACTG
GGACGAGAACATCGAACACGACCAGAAAATCCGCGTCGGCAACGAACGCCACGACGTCGTGGAAAAGAACAGCTACACGG
AATTCAAGGCCGAAGAACACCACACCGTTTACGCAGACCGCAAAGTCGAAGCACGGGCCAACGACCACCTGACCGTGGGC
GTGAACCAGCACATCAAGATTGGCACCGGGCAATTCATCGACGCCGGCCAAGAAATTCACCTGAGCAGCGGAATGAAAGT
GGTGCTGGAGGCTGGGGCCGAACTGACGCTGGTCGGCGGTGGCAGCTTCATCAAGATCGATGGCGGCGGCGTGACCATGA
GCGGGCCGGCGATCAACATCAACTCCGGCGGCGGACCAGGCAGCGGCACGGGTGCCGCCCCGTTGATGCCGGGCGTGCTG
AAACAAGCAGATGCCGACAAGGCGGGCGCCGTGCTGACGCCGGCGCAAATCAACACCCTCAAACGTAATGCGCCGTTCTG
CGAAGAGTGTGAAAAATGCAAGGCAGGTGCCTGTGCCATCTAA

Upstream 100 bases:

>100_bases
TCTGCTGGTCGATGTTGTTTACGCCCCTCCAGAATTTCGCGTACGTTGACCCGCTTTGCGGGCGTCGACGAGCGCCGCTG
TACAGCACGAGGAACAAGGG

Downstream 100 bases:

>100_bases
TCGAATGACACCCAAGGATTGGCTGGCACAACAGCCGCTGCAAAAAGATGAGCGTCTGTATCTGGTCATCAGCGCCGCGA
GCGATGCCGAAGCGCTCAAA

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; VgrG-Like Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; Conserved Hypothethical Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; Vrg Family Protein; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 680; Mature: 680

Protein sequence:

>680_residues
MFAPANETHFALTIEGLSADFQVFTLTGREAISQPFVFEVELVSEQPSLDLETLLHKPAFLQLSPDGSGIHGLIYRAAQG
DSGKRLTRYSVTLRPQLAYLAHRINQRIFQNLSVPKIIGKVLEEHGIQGNAYAFQTGSIYPERIYCVQYDESDLHFIQRL
CEEEGIHYHFQHSATGHKLVFGDDQTVFKKLAPVAYQQDSGMVASDPVIKRFDLRLETRTSRTTRRDYDFEKPRLTLESE
NRGDALPDLEDYDYPGRFVDRERGKHLAKRALERHRSDFQLAEGKSDQPLLVSGHFLALKEHPKAKWNDLWLLTEVHHEG
KQPQVLEESVTSDTTALKDDFHQGYRNRFQATPWDVPNRPPLRHPKPRILGSQSAVVTGPKGEEIHCDEYGRVKVQFHWD
RDGQADDKTSCWLRVSSAWAGAQYGGIAIPRIGMEVLVTFLEGDPDQPLISGCLYHKENTVPYALPANKTRTTFKTLSSM
GGGGFNELRIEDKKGQEQIFLHAQRDWDENIEHDQKIRVGNERHDVVEKNSYTEFKAEEHHTVYADRKVEARANDHLTVG
VNQHIKIGTGQFIDAGQEIHLSSGMKVVLEAGAELTLVGGGSFIKIDGGGVTMSGPAININSGGGPGSGTGAAPLMPGVL
KQADADKAGAVLTPAQINTLKRNAPFCEECEKCKAGACAI

Sequences:

>Translated_680_residues
MFAPANETHFALTIEGLSADFQVFTLTGREAISQPFVFEVELVSEQPSLDLETLLHKPAFLQLSPDGSGIHGLIYRAAQG
DSGKRLTRYSVTLRPQLAYLAHRINQRIFQNLSVPKIIGKVLEEHGIQGNAYAFQTGSIYPERIYCVQYDESDLHFIQRL
CEEEGIHYHFQHSATGHKLVFGDDQTVFKKLAPVAYQQDSGMVASDPVIKRFDLRLETRTSRTTRRDYDFEKPRLTLESE
NRGDALPDLEDYDYPGRFVDRERGKHLAKRALERHRSDFQLAEGKSDQPLLVSGHFLALKEHPKAKWNDLWLLTEVHHEG
KQPQVLEESVTSDTTALKDDFHQGYRNRFQATPWDVPNRPPLRHPKPRILGSQSAVVTGPKGEEIHCDEYGRVKVQFHWD
RDGQADDKTSCWLRVSSAWAGAQYGGIAIPRIGMEVLVTFLEGDPDQPLISGCLYHKENTVPYALPANKTRTTFKTLSSM
GGGGFNELRIEDKKGQEQIFLHAQRDWDENIEHDQKIRVGNERHDVVEKNSYTEFKAEEHHTVYADRKVEARANDHLTVG
VNQHIKIGTGQFIDAGQEIHLSSGMKVVLEAGAELTLVGGGSFIKIDGGGVTMSGPAININSGGGPGSGTGAAPLMPGVL
KQADADKAGAVLTPAQINTLKRNAPFCEECEKCKAGACAI
>Mature_680_residues
MFAPANETHFALTIEGLSADFQVFTLTGREAISQPFVFEVELVSEQPSLDLETLLHKPAFLQLSPDGSGIHGLIYRAAQG
DSGKRLTRYSVTLRPQLAYLAHRINQRIFQNLSVPKIIGKVLEEHGIQGNAYAFQTGSIYPERIYCVQYDESDLHFIQRL
CEEEGIHYHFQHSATGHKLVFGDDQTVFKKLAPVAYQQDSGMVASDPVIKRFDLRLETRTSRTTRRDYDFEKPRLTLESE
NRGDALPDLEDYDYPGRFVDRERGKHLAKRALERHRSDFQLAEGKSDQPLLVSGHFLALKEHPKAKWNDLWLLTEVHHEG
KQPQVLEESVTSDTTALKDDFHQGYRNRFQATPWDVPNRPPLRHPKPRILGSQSAVVTGPKGEEIHCDEYGRVKVQFHWD
RDGQADDKTSCWLRVSSAWAGAQYGGIAIPRIGMEVLVTFLEGDPDQPLISGCLYHKENTVPYALPANKTRTTFKTLSSM
GGGGFNELRIEDKKGQEQIFLHAQRDWDENIEHDQKIRVGNERHDVVEKNSYTEFKAEEHHTVYADRKVEARANDHLTVG
VNQHIKIGTGQFIDAGQEIHLSSGMKVVLEAGAELTLVGGGSFIKIDGGGVTMSGPAININSGGGPGSGTGAAPLMPGVL
KQADADKAGAVLTPAQINTLKRNAPFCEECEKCKAGACAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75775; Mature: 75775

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAPANETHFALTIEGLSADFQVFTLTGREAISQPFVFEVELVSEQPSLDLETLLHKPAF
CCCCCCCCEEEEEEECCCCCEEEEEEECHHHHCCCCEEEEEEECCCCCCCHHHHHCCCEE
LQLSPDGSGIHGLIYRAAQGDSGKRLTRYSVTLRPQLAYLAHRINQRIFQNLSVPKIIGK
EEECCCCCCCEEEEEEECCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHH
VLEEHGIQGNAYAFQTGSIYPERIYCVQYDESDLHFIQRLCEEEGIHYHFQHSATGHKLV
HHHHHCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCEEE
FGDDQTVFKKLAPVAYQQDSGMVASDPVIKRFDLRLETRTSRTTRRDYDFEKPRLTLESE
ECCCHHHHHHHCCCEEECCCCCEECCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEECC
NRGDALPDLEDYDYPGRFVDRERGKHLAKRALERHRSDFQLAEGKSDQPLLVSGHFLALK
CCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEECEEEEEE
EHPKAKWNDLWLLTEVHHEGKQPQVLEESVTSDTTALKDDFHQGYRNRFQATPWDVPNRP
CCCCCCCCCEEEEEEHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PLRHPKPRILGSQSAVVTGPKGEEIHCDEYGRVKVQFHWDRDGQADDKTSCWLRVSSAWA
CCCCCCCCEECCCCEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCC
GAQYGGIAIPRIGMEVLVTFLEGDPDQPLISGCLYHKENTVPYALPANKTRTTFKTLSSM
CCCCCCEECCCCCHHHHHHHHCCCCCCHHHHHHHEECCCCCCEEECCCCCHHHHHHHHHC
GGGGFNELRIEDKKGQEQIFLHAQRDWDENIEHDQKIRVGNERHDVVEKNSYTEFKAEEH
CCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCC
HTVYADRKVEARANDHLTVGVNQHIKIGTGQFIDAGQEIHLSSGMKVVLEAGAELTLVGG
CEEEECCEEECCCCCEEEEECCCEEEECCCCEECCCCEEEECCCCEEEEECCCEEEEEEC
GSFIKIDGGGVTMSGPAININSGGGPGSGTGAAPLMPGVLKQADADKAGAVLTPAQINTL
CCEEEECCCCEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCHHHHHH
KRNAPFCEECEKCKAGACAI
HCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFAPANETHFALTIEGLSADFQVFTLTGREAISQPFVFEVELVSEQPSLDLETLLHKPAF
CCCCCCCCEEEEEEECCCCCEEEEEEECHHHHCCCCEEEEEEECCCCCCCHHHHHCCCEE
LQLSPDGSGIHGLIYRAAQGDSGKRLTRYSVTLRPQLAYLAHRINQRIFQNLSVPKIIGK
EEECCCCCCCEEEEEEECCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHH
VLEEHGIQGNAYAFQTGSIYPERIYCVQYDESDLHFIQRLCEEEGIHYHFQHSATGHKLV
HHHHHCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCEEE
FGDDQTVFKKLAPVAYQQDSGMVASDPVIKRFDLRLETRTSRTTRRDYDFEKPRLTLESE
ECCCHHHHHHHCCCEEECCCCCEECCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEECC
NRGDALPDLEDYDYPGRFVDRERGKHLAKRALERHRSDFQLAEGKSDQPLLVSGHFLALK
CCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEECEEEEEE
EHPKAKWNDLWLLTEVHHEGKQPQVLEESVTSDTTALKDDFHQGYRNRFQATPWDVPNRP
CCCCCCCCCEEEEEEHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PLRHPKPRILGSQSAVVTGPKGEEIHCDEYGRVKVQFHWDRDGQADDKTSCWLRVSSAWA
CCCCCCCCEECCCCEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCC
GAQYGGIAIPRIGMEVLVTFLEGDPDQPLISGCLYHKENTVPYALPANKTRTTFKTLSSM
CCCCCCEECCCCCHHHHHHHHCCCCCCHHHHHHHEECCCCCCEEECCCCCHHHHHHHHHC
GGGGFNELRIEDKKGQEQIFLHAQRDWDENIEHDQKIRVGNERHDVVEKNSYTEFKAEEH
CCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCC
HTVYADRKVEARANDHLTVGVNQHIKIGTGQFIDAGQEIHLSSGMKVVLEAGAELTLVGG
CEEEECCEEECCCCCEEEEECCCEEEECCCCEECCCCEEEECCCCEEEEECCCEEEEEEC
GSFIKIDGGGVTMSGPAININSGGGPGSGTGAAPLMPGVLKQADADKAGAVLTPAQINTL
CCEEEECCCCEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCHHHHHH
KRNAPFCEECEKCKAGACAI
HCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA