| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458266
Identifier: 77458266
GI number: 77458266
Start: 2322377
End: 2322589
Strand: Reverse
Name: 77458266
Synonym: Pfl01_2039
Alternate gene names: NA
Gene position: 2322589-2322377 (Counterclockwise)
Preceding gene: 77458267
Following gene: 77458265
Centisome position: 36.07
GC content: 35.68
Gene sequence:
>213_bases GTGACAGTTTTTTATGGAAACAATCTCAACGCCTTATGGGACCTACTCAGCACCGACGTGGAACGCCCCCTAGATTTAAT ATGGAAAAATTCTGAATACTCTCAAAAAAACATGGGAGATTCGTACAATAAAATAATAAATATTTTTGAACGCACAAAGC AACAGGATGTGAATTTCGGATGGGAGGAAAAATTTAACTATTATCTAGAGTAA
Upstream 100 bases:
>100_bases TGGAACCTGGAAGTGAGTTTTAAAAATTATAATTGTACTTGATGGTTTAACTATTTCATCAGAGCAGGAGTTTCATAAAA AAATAGCCGTTGCTTTTGCG
Downstream 100 bases:
>100_bases CCACTAAAAAGCTAAAATGGGCTATCAAAACTACAAAACAAAGGGCGTAGATTTATTTTTTACTGAAGAGAATAAATCTA TCCCCTTTCAGCAAACAGGC
Product: ribonuclease inhibitor barstar
Products: NA
Alternate protein names: Barstar
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MTVFYGNNLNALWDLLSTDVERPLDLIWKNSEYSQKNMGDSYNKIINIFERTKQQDVNFGWEEKFNYYLE
Sequences:
>Translated_70_residues MTVFYGNNLNALWDLLSTDVERPLDLIWKNSEYSQKNMGDSYNKIINIFERTKQQDVNFGWEEKFNYYLE >Mature_69_residues TVFYGNNLNALWDLLSTDVERPLDLIWKNSEYSQKNMGDSYNKIINIFERTKQQDVNFGWEEKFNYYLE
Specific function: Unknown
COG id: COG2732
COG function: function code K; Barstar, RNAse (barnase) inhibitor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8492; Mature: 8360
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFYGNNLNALWDLLSTDVERPLDLIWKNSEYSQKNMGDSYNKIINIFERTKQQDVNFG CEEEECCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC WEEKFNYYLE CCCCCCCCCC >Mature Secondary Structure TVFYGNNLNALWDLLSTDVERPLDLIWKNSEYSQKNMGDSYNKIINIFERTKQQDVNFG EEEECCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC WEEKFNYYLE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA