| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458265
Identifier: 77458265
GI number: 77458265
Start: 2321782
End: 2322360
Strand: Reverse
Name: 77458265
Synonym: Pfl01_2038
Alternate gene names: NA
Gene position: 2322360-2321782 (Counterclockwise)
Preceding gene: 77458266
Following gene: 77458264
Centisome position: 36.07
GC content: 38.86
Gene sequence:
>579_bases ATGGGCTATCAAAACTACAAAACAAAGGGCGTAGATTTATTTTTTACTGAAGAGAATAAATCTATCCCCTTTCAGCAAAC AGGCTTGAAAGACCAACCAAAGATAAACGAATTGGCAAGCAAAATGTTCACCATCGACAAAAATAAAATTCAAGAATATT GGCTTGAAGAAATATACCCTCGACAAAACTCAATTACGTTCAATAATGGATTCTATTGCTTCTTCGAGCACTCAGCAAAA GAAGAAAAATTAACAAAAAAAAAAATATGGATTCCGGCAAATGATTTCTTACTAAACCACACTGACATATGCGAGGGCCT CTCGACCATTTATACAGCAGAAGGGTCTAATAACAATTCTTTTACTTGCGGCGAATGCCTAGCCTCCGGGGACGATGGCT TCATTGCACTTTCCAAAAAAGACACCGGCGAACTAGTCTGGCTGATCGTATTGAGCGGAACCAATCCATTTGAAAAAATC ATCATTCACAACAGCAGCATCCATGTTCAATCATCAAGCGGCACATTAGCAATAGTACCCACTGATCGGCCAGACAACCT TTCTATAGAATGGTCTTAA
Upstream 100 bases:
>100_bases AAAATAATAAATATTTTTGAACGCACAAAGCAACAGGATGTGAATTTCGGATGGGAGGAAAAATTTAACTATTATCTAGA GTAACCACTAAAAAGCTAAA
Downstream 100 bases:
>100_bases CTAAAAAACAGAATCAAAGGGACAATCTACCCCCTTTTCGAACAAACAAAATGAAAATTTTCTCAACATTGAACACCTGA AAAACTATAACTTCCCTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MGYQNYKTKGVDLFFTEENKSIPFQQTGLKDQPKINELASKMFTIDKNKIQEYWLEEIYPRQNSITFNNGFYCFFEHSAK EEKLTKKKIWIPANDFLLNHTDICEGLSTIYTAEGSNNNSFTCGECLASGDDGFIALSKKDTGELVWLIVLSGTNPFEKI IIHNSSIHVQSSSGTLAIVPTDRPDNLSIEWS
Sequences:
>Translated_192_residues MGYQNYKTKGVDLFFTEENKSIPFQQTGLKDQPKINELASKMFTIDKNKIQEYWLEEIYPRQNSITFNNGFYCFFEHSAK EEKLTKKKIWIPANDFLLNHTDICEGLSTIYTAEGSNNNSFTCGECLASGDDGFIALSKKDTGELVWLIVLSGTNPFEKI IIHNSSIHVQSSSGTLAIVPTDRPDNLSIEWS >Mature_191_residues GYQNYKTKGVDLFFTEENKSIPFQQTGLKDQPKINELASKMFTIDKNKIQEYWLEEIYPRQNSITFNNGFYCFFEHSAKE EKLTKKKIWIPANDFLLNHTDICEGLSTIYTAEGSNNNSFTCGECLASGDDGFIALSKKDTGELVWLIVLSGTNPFEKII IHNSSIHVQSSSGTLAIVPTDRPDNLSIEWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21779; Mature: 21647
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYQNYKTKGVDLFFTEENKSIPFQQTGLKDQPKINELASKMFTIDKNKIQEYWLEEIYP CCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHEECCHHHHHHHHHHHHCC RQNSITFNNGFYCFFEHSAKEEKLTKKKIWIPANDFLLNHTDICEGLSTIYTAEGSNNNS CCCCEEECCCEEEEEECCCCCHHHHHEEEEECCCCEEECCHHHHCCCCEEEEECCCCCCC FTCGECLASGDDGFIALSKKDTGELVWLIVLSGTNPFEKIIIHNSSIHVQSSSGTLAIVP EEHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEECCEEEEECCCCEEEEEE TDRPDNLSIEWS CCCCCCEEEEEC >Mature Secondary Structure GYQNYKTKGVDLFFTEENKSIPFQQTGLKDQPKINELASKMFTIDKNKIQEYWLEEIYP CCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHHEECCHHHHHHHHHHHHCC RQNSITFNNGFYCFFEHSAKEEKLTKKKIWIPANDFLLNHTDICEGLSTIYTAEGSNNNS CCCCEEECCCEEEEEECCCCCHHHHHEEEEECCCCEEECCHHHHCCCCEEEEECCCCCCC FTCGECLASGDDGFIALSKKDTGELVWLIVLSGTNPFEKIIIHNSSIHVQSSSGTLAIVP EEHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEECCEEEEECCCCEEEEEE TDRPDNLSIEWS CCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA