| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is zraS [H]
Identifier: 77458230
GI number: 77458230
Start: 2285878
End: 2287371
Strand: Direct
Name: zraS [H]
Synonym: Pfl01_2003
Alternate gene names: 77458230
Gene position: 2285878-2287371 (Clockwise)
Preceding gene: 77458229
Following gene: 77458231
Centisome position: 35.5
GC content: 60.31
Gene sequence:
>1494_bases ATGCAACGACTGGAAGAACAGAAAACATCGGCACCGAACCTCGCGCTGGCGGCCATCAAGAGCTGGGGCGGGCAGTTCAA TCTGCTGCGCTGGTTTTCGCTGGCAAGTTTTTTCATCATCGCGGCCGTGGCGCTGGGGCTGGGGTATATCTCCACGCGCT TCGTGGTCACCGAAAGCGTGGAGCGCGATGCGCTGCTCACCGCGCAATTCGTGCAGGCCATCGGCGATGCAGAAATGCGC CATGCCAACATCACGCCGCAACGGACCATGGGCGAGATGCTCGACCCGCGCCAGGACGAGAACTACCCCGACGTAGATCC GCTGTCCCATGCAATGGCCCGTGCCGAGTTTCTCGATCATGTCGAACATTTGCCGGATGTTCTGCTGGCCACGGTGTACG CCCTGGACCGCACGGTCATCTGGTCGACCAACCCCGAACTGATCAACGTCAAGTTTGAAGACGACGACGAGCTGGATGAG TCGTTCGAGATGAAAGTCCCGGTGTCTTCCAGTTATCACAAGATCGACGATGAAAAACCCGAGCAGCGGCTTTCTCGCGA ACCCAAATACCTGTTCATCGAAAACTACATTCCGATGTTCAACGCCGACAAAAGCAAAGTGGTCGCCATGGTCGAGATCT ACAAGGAACCGGCGGATCTGGTCGACCGTATCGACCGAGGGTTCGCCTCGATCTGGGCTGCGACGATCCTCGGCGGCGCG GCGATTTACCTCGGCTTGTTCTGGATCGTGCGGCGCGCCTCGACGCTGCTGCAGAGCCAGCAGCAGCAACTGATCAGCAA TGAAACCTTTGTCGCTCTGGGCGAGATGTCCTCGGCGGTGGCCCACAGCCTGCGCAACCCGCTGGCGACCATTCGTTCCA GCGCCGAACTGGCCCAGGAAATCGCCAGTCCGGGCGCACAGCGCAACATCGGCGACATCATCAGCCAGGTCGACCGCATG TCGCGCTGGGTTCGCGAACTGCTGGTGTCGTTGCGCCCGATGAGTGACGACGGCGAGGCGGTGGATCTGCTGGCGGCGGT CGAGGACACCCTGGGGGCGTTTGATGCGCTGATCCGGCGCAACGGCGTCGAAGTGCGATTCACGCCACAAGATTGCCCGC CGGTGGTCAGTCAACAGGTGCTGCTCACGCAAATTCTCAATAGCCTGTTTGCCAATGCCCTGGAAGCGATGCCCAGAGGC GGCGTACTCAGTGTCGAGATTGAAACGGCGCAGACCGGTCAGGTGCGCATGACCCTGAGCGACACTGGCAAAGGCATGAG CGCGCAGCAGCAGCAACTGGTGTTCAAACCGTTTTTCACCACCAAGCAGGGCGGCCTCGGGGTCGGCCTGGCGCTGGTCA AGCGAATCATGGAGCGGTTTCAGGGTTCGGTCATGCTGACCAGCCGCGAGCAGGAAGGAACCCGCGTCAGTCTCAACTTT AGAGTGGCATCGGGAGGGGAATATGGAACACAGCATTCTGCTGGTCGAGGATGA
Upstream 100 bases:
>100_bases AATAGCATCATTGAACCGTGTGTCACGGTCATTGCCACCTACACTCATTCGAGAGAGGGCGGCTGTAACCGGCTCGATAC CAGAACGCCAGGGCATCCCC
Downstream 100 bases:
>100_bases CGAACTGCTGGCCGAGAATATTCAGACCTACCTGGAGCGCAAAGACTTCGAGGTGACGGTCTGCCACTCGGCCGAGGACG CGCTGGGGCAACTGGAAAGC
Product: periplasmic sensor Signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MQRLEEQKTSAPNLALAAIKSWGGQFNLLRWFSLASFFIIAAVALGLGYISTRFVVTESVERDALLTAQFVQAIGDAEMR HANITPQRTMGEMLDPRQDENYPDVDPLSHAMARAEFLDHVEHLPDVLLATVYALDRTVIWSTNPELINVKFEDDDELDE SFEMKVPVSSSYHKIDDEKPEQRLSREPKYLFIENYIPMFNADKSKVVAMVEIYKEPADLVDRIDRGFASIWAATILGGA AIYLGLFWIVRRASTLLQSQQQQLISNETFVALGEMSSAVAHSLRNPLATIRSSAELAQEIASPGAQRNIGDIISQVDRM SRWVRELLVSLRPMSDDGEAVDLLAAVEDTLGAFDALIRRNGVEVRFTPQDCPPVVSQQVLLTQILNSLFANALEAMPRG GVLSVEIETAQTGQVRMTLSDTGKGMSAQQQQLVFKPFFTTKQGGLGVGLALVKRIMERFQGSVMLTSREQEGTRVSLNF RVASGGEYGTQHSAGRG
Sequences:
>Translated_497_residues MQRLEEQKTSAPNLALAAIKSWGGQFNLLRWFSLASFFIIAAVALGLGYISTRFVVTESVERDALLTAQFVQAIGDAEMR HANITPQRTMGEMLDPRQDENYPDVDPLSHAMARAEFLDHVEHLPDVLLATVYALDRTVIWSTNPELINVKFEDDDELDE SFEMKVPVSSSYHKIDDEKPEQRLSREPKYLFIENYIPMFNADKSKVVAMVEIYKEPADLVDRIDRGFASIWAATILGGA AIYLGLFWIVRRASTLLQSQQQQLISNETFVALGEMSSAVAHSLRNPLATIRSSAELAQEIASPGAQRNIGDIISQVDRM SRWVRELLVSLRPMSDDGEAVDLLAAVEDTLGAFDALIRRNGVEVRFTPQDCPPVVSQQVLLTQILNSLFANALEAMPRG GVLSVEIETAQTGQVRMTLSDTGKGMSAQQQQLVFKPFFTTKQGGLGVGLALVKRIMERFQGSVMLTSREQEGTRVSLNF RVASGGEYGTQHSAGRG >Mature_497_residues MQRLEEQKTSAPNLALAAIKSWGGQFNLLRWFSLASFFIIAAVALGLGYISTRFVVTESVERDALLTAQFVQAIGDAEMR HANITPQRTMGEMLDPRQDENYPDVDPLSHAMARAEFLDHVEHLPDVLLATVYALDRTVIWSTNPELINVKFEDDDELDE SFEMKVPVSSSYHKIDDEKPEQRLSREPKYLFIENYIPMFNADKSKVVAMVEIYKEPADLVDRIDRGFASIWAATILGGA AIYLGLFWIVRRASTLLQSQQQQLISNETFVALGEMSSAVAHSLRNPLATIRSSAELAQEIASPGAQRNIGDIISQVDRM SRWVRELLVSLRPMSDDGEAVDLLAAVEDTLGAFDALIRRNGVEVRFTPQDCPPVVSQQVLLTQILNSLFANALEAMPRG GVLSVEIETAQTGQVRMTLSDTGKGMSAQQQQLVFKPFFTTKQGGLGVGLALVKRIMERFQGSVMLTSREQEGTRVSLNF RVASGGEYGTQHSAGRG
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=250, Percent_Identity=34.4, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1788549, Length=224, Percent_Identity=30.3571428571429, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1788393, Length=226, Percent_Identity=29.2035398230088, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790861, Length=325, Percent_Identity=25.5384615384615, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786783, Length=222, Percent_Identity=25.2252252252252, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790300, Length=218, Percent_Identity=25.2293577981651, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 55072; Mature: 55072
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLEEQKTSAPNLALAAIKSWGGQFNLLRWFSLASFFIIAAVALGLGYISTRFVVTESV CCCHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC ERDALLTAQFVQAIGDAEMRHANITPQRTMGEMLDPRQDENYPDVDPLSHAMARAEFLDH CHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH VEHLPDVLLATVYALDRTVIWSTNPELINVKFEDDDELDESFEMKVPVSSSYHKIDDEKP HHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCH EQRLSREPKYLFIENYIPMFNADKSKVVAMVEIYKEPADLVDRIDRGFASIWAATILGGA HHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH AIYLGLFWIVRRASTLLQSQQQQLISNETFVALGEMSSAVAHSLRNPLATIRSSAELAQE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH IASPGAQRNIGDIISQVDRMSRWVRELLVSLRPMSDDGEAVDLLAAVEDTLGAFDALIRR HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC NGVEVRFTPQDCPPVVSQQVLLTQILNSLFANALEAMPRGGVLSVEIETAQTGQVRMTLS CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEC DTGKGMSAQQQQLVFKPFFTTKQGGLGVGLALVKRIMERFQGSVMLTSREQEGTRVSLNF CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEE RVASGGEYGTQHSAGRG EEECCCCCCCCCCCCCC >Mature Secondary Structure MQRLEEQKTSAPNLALAAIKSWGGQFNLLRWFSLASFFIIAAVALGLGYISTRFVVTESV CCCHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC ERDALLTAQFVQAIGDAEMRHANITPQRTMGEMLDPRQDENYPDVDPLSHAMARAEFLDH CHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH VEHLPDVLLATVYALDRTVIWSTNPELINVKFEDDDELDESFEMKVPVSSSYHKIDDEKP HHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCH EQRLSREPKYLFIENYIPMFNADKSKVVAMVEIYKEPADLVDRIDRGFASIWAATILGGA HHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH AIYLGLFWIVRRASTLLQSQQQQLISNETFVALGEMSSAVAHSLRNPLATIRSSAELAQE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH IASPGAQRNIGDIISQVDRMSRWVRELLVSLRPMSDDGEAVDLLAAVEDTLGAFDALIRR HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC NGVEVRFTPQDCPPVVSQQVLLTQILNSLFANALEAMPRGGVLSVEIETAQTGQVRMTLS CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEC DTGKGMSAQQQQLVFKPFFTTKQGGLGVGLALVKRIMERFQGSVMLTSREQEGTRVSLNF CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEE RVASGGEYGTQHSAGRG EEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]