| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is cotA [H]
Identifier: 77458228
GI number: 77458228
Start: 2281873
End: 2284683
Strand: Direct
Name: cotA [H]
Synonym: Pfl01_2001
Alternate gene names: 77458228
Gene position: 2281873-2284683 (Clockwise)
Preceding gene: 77458227
Following gene: 77458229
Centisome position: 35.44
GC content: 62.97
Gene sequence:
>2811_bases ATGATGGACAGAGCAATGCGTGACCCCAAAAAGCTGTTCCTGTTGACGCCACTGAGCGTCTTCCTGATGTTGGCCCTTGG CCAGATGACCGGGGTCCGAGCGAGCCCGATCGACGACGAGAATCAGCCGGAAGCGTCCGACCCGTCGGCCTATTACGACG AGCCCGAAGACCGCGCTGGCGCGCTCAATGCAATCCTGACGATGCCCGAGGCCAACTTAGACTCCTTCGATCTGCCTGAC GGGGTCAAAGGCACGCGCAACACGACGCGCATGGAAAACATCCTGCCGCCCACCGTCCAGACCAGTTTCAATTACCCCAC CAACGGCAAGCCAAGCCCGCTGTACGGTGCCCAGCCGTTCACTCAGCAACTGGTGCTGTTCGAAGAGTTCGGCCCGGAAA AACTCGACCCGACCACACCGGCTGCGCCGTTGAGTTTCCCGCCGGCCGCCATCGGCCCGGCGCCGGCGCAAGACCCGAAC AACATCGCCCGCAGCGCGCCTCCCGGCACGGCGCTGGATGCGTTTTTGCGTCAACCGGGGCTTACGCCATTTCCGAGCCA GTATGCCAACACGGTTGACCGCAACCCTTGGCAGGCGCAGATCGAACTGTTTCTCAACCGTCACATCGGTTCCTCCGCCG AAGGCCGGCCACCGGGAAAAGGCTGGGCTCATCAGCGCTGGAACGAGTTCTACCCGCAAGTCGCCTACAAGACCGTGCAG ACCGGTGCGCGGCTGAACGGTGGTCTGCGTGATAGTCGGCAGATGCACGGTTACGCGGTCGGCGAATTCGGCCCCGGCGG TCTGTACCACAACGTCGCGGGCGTGCCGGCGACCGATGGCACGGCCAAGGGTGTCGACCCACGGTTCCACCCGGCGATGC CGGTGCAGGACCACAACTCGGTGTGGACCTTCGACGGCACGCTGCCGCCGAAACTGTTGATGGTGCGCTACGGCCAACCA GTGCTGATGCGGCACTACAACGGCTTGCCGATCGACCCGTCGGCCAACCGCGGTTTCGGTCTGCACACCATCACCACCCA CGAGCACAACGGCCACGCGCCGGCGGAAAGCGACGGTTATGCCAACGCGTTCTTCTTCCCCGGCCAGTACTACGATTATC GCTGGCCGATCCAGCTCGCCGGCTACGACAGCATCAACACCAAGGCTGAAGACCCGCGCGCCGCGTTTCCGTGCGCACCG GGGGAAACCCTGTGGGTCAACGACATGCAACCTGCGAAAAAGACCTGCGACCACGGCACCATCAAGATTCGTGGCGACTG GCGCGAAACCATGAGCACCCACTGGTTCCACGACCACATGCTCGATTTCACCGCGCAGAACGTCTACAAGGGCAACGCGG CGATGATGAACTACTACAGCGCCCTGGACCGTGGCAACGAATCGGTGAACGACGGCGTCAACCTGCGTTTCCCCAGCGGC AGCGCCTTGCCGTGGGGCAACCGCGACTATGACGTCAACCTGGTGTTCGCCGACAAGGCCTGGGATCAGCAGGGCCAGTT GTGGTTCAACCCGTTCAACACCGACGGCTTCATCGGCGATCAGGTGCTGGTCAACTGGCAGTGGAAACCGACCCTCGACG TGCGGGCCCGCAGTTATCGCTTCCGCCTCCTCAACGGTTCGGTGTCGCGCTACTTCAAGCTCGCGCTGGTGCGGGAAGTC AAAGGCACCGGCGGCGAATTCCAGGGGCCGAGAAACTCCGGCGTGTCGTACAGCCGAGTGCCGTTTCACATGATCGCCAA CGACGGCAACATCATGGAACACAGCGTGCCGTTCGACGGTTCGATGGACCTCGATGCCGACGGCGACAAACAGAACCACA ACGCGATTCTGCCGACCCAGGGCATCGCCGAGCGGTTCGACATCATCGTCAACTTTGCGAAAAACGGCATCAAGCCGGGC GACAAGCTGTTCTTCGTCAACCTGCAAGCCCAGGACGACGGCAAGGGCCCGAAAGAAGTGATCCCGCTGGCCGACGTGCT GTCGGAGAAATACCTGGCAGTCATCAAACAGACCAGCAAGGGTCCGCAATGGGATCGGGGTGACCCGGTGGTGGGCAAGG TCCTGCAACTCAACGTCAAGGCTTATACCGGCCAGGATCTGTCGATGAACCCGGCGGCCTACGAACCGGCCAAACCGGGC AAGGCGGAAGGCCTGGTGATGATTCCGCTGAAGATCCACCGTGACAACGCTGCCGACAAGGCGTTGCTGGCCAAGGCGCT GCACCGGACCTTCACCTTCGGTCGCGCCGACGGCACCGATGAAGCGCCGTGGACGATCAAGACCGATAGCGGTTTCGGCT TCCACATGGACCCACGCCGGTTGAATGCCTCGACCAAACTGGCCAGCGGCCCGACCGACGCCGGGGTCAACGGCATCGGC ACCCTGGAAGTCTGGAACATCAGGGCTGGCGGCACGGGCTGGAGCCATCCGGTGCACGTGCACTTCGAGGAGGGGATCAT CCTGAGCCGTGGCGGCAAGGCCCCGCCTGAGTGGGAAAAATGGGCGCGCAAGGACGTCTACCGGATCGGTTCGGAGGCCG ACGGGCTGGACAACGTCGAGATGGCGATCAACTTCCGCGAGTTCGCCGGGACCTACATGGAGCACTGTCACAACACCCAG CATGAGGACAACTCGATGCTGCTGCGTTGGGACCTCGAGAAACCCGGGCAACTGCAGTTGATGCCGACACCGCTGCCTAG CTGGGATGGCGTGCGCTACGTCAACTCCGCCGCGCTGCCAACCTTCCGCACTGGCGACGGCTTCGGCCCGCAAGTGACCG TGAAACCATGA
Upstream 100 bases:
>100_bases GGCATGCAACAGCACTCGCAAGCCCCTGTAACAACTGGAAATGATTTTTTGGCGAGTTAATTGCAAAACACCATCACCCC TTCCTTAGATGAGGCGGCTG
Downstream 100 bases:
>100_bases GCAGGGAGGGAGCCGACATGACCCAGCCAACGCCGCGCTCCCGCGCCCTGGGCATGCACCTGATTCTGGTGCTGATCACC TGCCTGCTCGGCAGTCAGGT
Product: multicopper oxidase, type 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 936; Mature: 936
Protein sequence:
>936_residues MMDRAMRDPKKLFLLTPLSVFLMLALGQMTGVRASPIDDENQPEASDPSAYYDEPEDRAGALNAILTMPEANLDSFDLPD GVKGTRNTTRMENILPPTVQTSFNYPTNGKPSPLYGAQPFTQQLVLFEEFGPEKLDPTTPAAPLSFPPAAIGPAPAQDPN NIARSAPPGTALDAFLRQPGLTPFPSQYANTVDRNPWQAQIELFLNRHIGSSAEGRPPGKGWAHQRWNEFYPQVAYKTVQ TGARLNGGLRDSRQMHGYAVGEFGPGGLYHNVAGVPATDGTAKGVDPRFHPAMPVQDHNSVWTFDGTLPPKLLMVRYGQP VLMRHYNGLPIDPSANRGFGLHTITTHEHNGHAPAESDGYANAFFFPGQYYDYRWPIQLAGYDSINTKAEDPRAAFPCAP GETLWVNDMQPAKKTCDHGTIKIRGDWRETMSTHWFHDHMLDFTAQNVYKGNAAMMNYYSALDRGNESVNDGVNLRFPSG SALPWGNRDYDVNLVFADKAWDQQGQLWFNPFNTDGFIGDQVLVNWQWKPTLDVRARSYRFRLLNGSVSRYFKLALVREV KGTGGEFQGPRNSGVSYSRVPFHMIANDGNIMEHSVPFDGSMDLDADGDKQNHNAILPTQGIAERFDIIVNFAKNGIKPG DKLFFVNLQAQDDGKGPKEVIPLADVLSEKYLAVIKQTSKGPQWDRGDPVVGKVLQLNVKAYTGQDLSMNPAAYEPAKPG KAEGLVMIPLKIHRDNAADKALLAKALHRTFTFGRADGTDEAPWTIKTDSGFGFHMDPRRLNASTKLASGPTDAGVNGIG TLEVWNIRAGGTGWSHPVHVHFEEGIILSRGGKAPPEWEKWARKDVYRIGSEADGLDNVEMAINFREFAGTYMEHCHNTQ HEDNSMLLRWDLEKPGQLQLMPTPLPSWDGVRYVNSAALPTFRTGDGFGPQVTVKP
Sequences:
>Translated_936_residues MMDRAMRDPKKLFLLTPLSVFLMLALGQMTGVRASPIDDENQPEASDPSAYYDEPEDRAGALNAILTMPEANLDSFDLPD GVKGTRNTTRMENILPPTVQTSFNYPTNGKPSPLYGAQPFTQQLVLFEEFGPEKLDPTTPAAPLSFPPAAIGPAPAQDPN NIARSAPPGTALDAFLRQPGLTPFPSQYANTVDRNPWQAQIELFLNRHIGSSAEGRPPGKGWAHQRWNEFYPQVAYKTVQ TGARLNGGLRDSRQMHGYAVGEFGPGGLYHNVAGVPATDGTAKGVDPRFHPAMPVQDHNSVWTFDGTLPPKLLMVRYGQP VLMRHYNGLPIDPSANRGFGLHTITTHEHNGHAPAESDGYANAFFFPGQYYDYRWPIQLAGYDSINTKAEDPRAAFPCAP GETLWVNDMQPAKKTCDHGTIKIRGDWRETMSTHWFHDHMLDFTAQNVYKGNAAMMNYYSALDRGNESVNDGVNLRFPSG SALPWGNRDYDVNLVFADKAWDQQGQLWFNPFNTDGFIGDQVLVNWQWKPTLDVRARSYRFRLLNGSVSRYFKLALVREV KGTGGEFQGPRNSGVSYSRVPFHMIANDGNIMEHSVPFDGSMDLDADGDKQNHNAILPTQGIAERFDIIVNFAKNGIKPG DKLFFVNLQAQDDGKGPKEVIPLADVLSEKYLAVIKQTSKGPQWDRGDPVVGKVLQLNVKAYTGQDLSMNPAAYEPAKPG KAEGLVMIPLKIHRDNAADKALLAKALHRTFTFGRADGTDEAPWTIKTDSGFGFHMDPRRLNASTKLASGPTDAGVNGIG TLEVWNIRAGGTGWSHPVHVHFEEGIILSRGGKAPPEWEKWARKDVYRIGSEADGLDNVEMAINFREFAGTYMEHCHNTQ HEDNSMLLRWDLEKPGQLQLMPTPLPSWDGVRYVNSAALPTFRTGDGFGPQVTVKP >Mature_936_residues MMDRAMRDPKKLFLLTPLSVFLMLALGQMTGVRASPIDDENQPEASDPSAYYDEPEDRAGALNAILTMPEANLDSFDLPD GVKGTRNTTRMENILPPTVQTSFNYPTNGKPSPLYGAQPFTQQLVLFEEFGPEKLDPTTPAAPLSFPPAAIGPAPAQDPN NIARSAPPGTALDAFLRQPGLTPFPSQYANTVDRNPWQAQIELFLNRHIGSSAEGRPPGKGWAHQRWNEFYPQVAYKTVQ TGARLNGGLRDSRQMHGYAVGEFGPGGLYHNVAGVPATDGTAKGVDPRFHPAMPVQDHNSVWTFDGTLPPKLLMVRYGQP VLMRHYNGLPIDPSANRGFGLHTITTHEHNGHAPAESDGYANAFFFPGQYYDYRWPIQLAGYDSINTKAEDPRAAFPCAP GETLWVNDMQPAKKTCDHGTIKIRGDWRETMSTHWFHDHMLDFTAQNVYKGNAAMMNYYSALDRGNESVNDGVNLRFPSG SALPWGNRDYDVNLVFADKAWDQQGQLWFNPFNTDGFIGDQVLVNWQWKPTLDVRARSYRFRLLNGSVSRYFKLALVREV KGTGGEFQGPRNSGVSYSRVPFHMIANDGNIMEHSVPFDGSMDLDADGDKQNHNAILPTQGIAERFDIIVNFAKNGIKPG DKLFFVNLQAQDDGKGPKEVIPLADVLSEKYLAVIKQTSKGPQWDRGDPVVGKVLQLNVKAYTGQDLSMNPAAYEPAKPG KAEGLVMIPLKIHRDNAADKALLAKALHRTFTFGRADGTDEAPWTIKTDSGFGFHMDPRRLNASTKLASGPTDAGVNGIG TLEVWNIRAGGTGWSHPVHVHFEEGIILSRGGKAPPEWEKWARKDVYRIGSEADGLDNVEMAINFREFAGTYMEHCHNTQ HEDNSMLLRWDLEKPGQLQLMPTPLPSWDGVRYVNSAALPTFRTGDGFGPQVTVKP
Specific function: Involved in brown pigmentation during sporogenesis [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To S.antibioticus phenoxazinone synthase (phsA) [H]
Homologues:
None
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR008972 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 103552; Mature: 103552
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDRAMRDPKKLFLLTPLSVFLMLALGQMTGVRASPIDDENQPEASDPSAYYDEPEDRAG CCCCHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH ALNAILTMPEANLDSFDLPDGVKGTRNTTRMENILPPTVQTSFNYPTNGKPSPLYGAQPF HEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH TQQLVLFEEFGPEKLDPTTPAAPLSFPPAAIGPAPAQDPNNIARSAPPGTALDAFLRQPG HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCC LTPFPSQYANTVDRNPWQAQIELFLNRHIGSSAEGRPPGKGWAHQRWNEFYPQVAYKTVQ CCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TGARLNGGLRDSRQMHGYAVGEFGPGGLYHNVAGVPATDGTAKGVDPRFHPAMPVQDHNS CCCHHCCCCCCCHHCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VWTFDGTLPPKLLMVRYGQPVLMRHYNGLPIDPSANRGFGLHTITTHEHNGHAPAESDGY EEEECCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC ANAFFFPGQYYDYRWPIQLAGYDSINTKAEDPRAAFPCAPGETLWVNDMQPAKKTCDHGT CEEEECCCCCCCEECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCE IKIRGDWRETMSTHWFHDHMLDFTAQNVYKGNAAMMNYYSALDRGNESVNDGVNLRFPSG EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCC SALPWGNRDYDVNLVFADKAWDQQGQLWFNPFNTDGFIGDQVLVNWQWKPTLDVRARSYR CCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEECCEEEEEEECCCCCCEEECEEE FRLLNGSVSRYFKLALVREVKGTGGEFQGPRNSGVSYSRVPFHMIANDGNIMEHSVPFDG EEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEEEEECCCCEEEECCCCCC SMDLDADGDKQNHNAILPTQGIAERFDIIVNFAKNGIKPGDKLFFVNLQAQDDGKGPKEV CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHH IPLADVLSEKYLAVIKQTSKGPQWDRGDPVVGKVLQLNVKAYTGQDLSMNPAAYEPAKPG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCC KAEGLVMIPLKIHRDNAADKALLAKALHRTFTFGRADGTDEAPWTIKTDSGFGFHMDPRR CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHH LNASTKLASGPTDAGVNGIGTLEVWNIRAGGTGWSHPVHVHFEEGIILSRGGKAPPEWEK CCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCEEEECCCCCCCHHHH WARKDVYRIGSEADGLDNVEMAINFREFAGTYMEHCHNTQHEDNSMLLRWDLEKPGQLQL HHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEE MPTPLPSWDGVRYVNSAALPTFRTGDGFGPQVTVKP EECCCCCCCCCEEECCCCCCCEECCCCCCCEEEECC >Mature Secondary Structure MMDRAMRDPKKLFLLTPLSVFLMLALGQMTGVRASPIDDENQPEASDPSAYYDEPEDRAG CCCCHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH ALNAILTMPEANLDSFDLPDGVKGTRNTTRMENILPPTVQTSFNYPTNGKPSPLYGAQPF HEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH TQQLVLFEEFGPEKLDPTTPAAPLSFPPAAIGPAPAQDPNNIARSAPPGTALDAFLRQPG HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCC LTPFPSQYANTVDRNPWQAQIELFLNRHIGSSAEGRPPGKGWAHQRWNEFYPQVAYKTVQ CCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TGARLNGGLRDSRQMHGYAVGEFGPGGLYHNVAGVPATDGTAKGVDPRFHPAMPVQDHNS CCCHHCCCCCCCHHCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VWTFDGTLPPKLLMVRYGQPVLMRHYNGLPIDPSANRGFGLHTITTHEHNGHAPAESDGY EEEECCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC ANAFFFPGQYYDYRWPIQLAGYDSINTKAEDPRAAFPCAPGETLWVNDMQPAKKTCDHGT CEEEECCCCCCCEECCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCE IKIRGDWRETMSTHWFHDHMLDFTAQNVYKGNAAMMNYYSALDRGNESVNDGVNLRFPSG EEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCC SALPWGNRDYDVNLVFADKAWDQQGQLWFNPFNTDGFIGDQVLVNWQWKPTLDVRARSYR CCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEECCEEEEEEECCCCCCEEECEEE FRLLNGSVSRYFKLALVREVKGTGGEFQGPRNSGVSYSRVPFHMIANDGNIMEHSVPFDG EEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEEEEECCCCEEEECCCCCC SMDLDADGDKQNHNAILPTQGIAERFDIIVNFAKNGIKPGDKLFFVNLQAQDDGKGPKEV CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHH IPLADVLSEKYLAVIKQTSKGPQWDRGDPVVGKVLQLNVKAYTGQDLSMNPAAYEPAKPG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCC KAEGLVMIPLKIHRDNAADKALLAKALHRTFTFGRADGTDEAPWTIKTDSGFGFHMDPRR CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCHHH LNASTKLASGPTDAGVNGIGTLEVWNIRAGGTGWSHPVHVHFEEGIILSRGGKAPPEWEK CCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCEEEECCCCCCCHHHH WARKDVYRIGSEADGLDNVEMAINFREFAGTYMEHCHNTQHEDNSMLLRWDLEKPGQLQL HHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEE MPTPLPSWDGVRYVNSAALPTFRTGDGFGPQVTVKP EECCCCCCCCCEEECCCCCCCEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969499; 9455482; 9384377; 2821284; 3135411 [H]