| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458170
Identifier: 77458170
GI number: 77458170
Start: 2216087
End: 2216476
Strand: Direct
Name: 77458170
Synonym: Pfl01_1943
Alternate gene names: NA
Gene position: 2216087-2216476 (Clockwise)
Preceding gene: 77458169
Following gene: 77458172
Centisome position: 34.42
GC content: 52.56
Gene sequence:
>390_bases ATGGCAAGCATGAAACAAATTGGCTTGTACACAGGCATATTGGGAGCCTTGGCATCAGTGGCGGCGCTCGTCCTGCCGAC CCAGGCGGTTTCGCACAGCTCCAGCGGTAACAACAGCCCGGTCATTTCTGGCAACGGCAACAACGTCAGCTATCAATCCG GTTTTCCCGATCTTGAAACGATCAGAGCCCAGCGTCCCAACATCAGTGATCAACAGTACGCTGCAATTAAGCCCGGCATG ACATATGAACAGGTGCTGGACATCGTCAAGATTCCCGGTAAAGAGGCGGGCAGTAGCGGCAACGTGCAAGTTTATACATG GGGGACGGAGGTTTACGTATATATGGTGGTGACCTTGGTGAACGGCAAGGTTCAATCCAAATCTCACTGA
Upstream 100 bases:
>100_bases GCTTCAAGAAGGGCTCCGGATTCTCGGCCGTTGCCGCCCTTGATGCTCAGCGCTTCGTCGTAACCGCATAACTGAATCAT CTGAGAATCCAGGGAATGAA
Downstream 100 bases:
>100_bases TGCGGTGACCGCAGATCCGGCCTCTACTGTCGGCGGTGCTTCTTCAAGCTGGGGATTCGGAAAGCGTTTCAGGTAAGGGC TTTGCAGTAGCTTGAACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MASMKQIGLYTGILGALASVAALVLPTQAVSHSSSGNNSPVISGNGNNVSYQSGFPDLETIRAQRPNISDQQYAAIKPGM TYEQVLDIVKIPGKEAGSSGNVQVYTWGTEVYVYMVVTLVNGKVQSKSH
Sequences:
>Translated_129_residues MASMKQIGLYTGILGALASVAALVLPTQAVSHSSSGNNSPVISGNGNNVSYQSGFPDLETIRAQRPNISDQQYAAIKPGM TYEQVLDIVKIPGKEAGSSGNVQVYTWGTEVYVYMVVTLVNGKVQSKSH >Mature_128_residues ASMKQIGLYTGILGALASVAALVLPTQAVSHSSSGNNSPVISGNGNNVSYQSGFPDLETIRAQRPNISDQQYAAIKPGMT YEQVLDIVKIPGKEAGSSGNVQVYTWGTEVYVYMVVTLVNGKVQSKSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13649; Mature: 13517
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASMKQIGLYTGILGALASVAALVLPTQAVSHSSSGNNSPVISGNGNNVSYQSGFPDLET CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEECCCCCCHHH IRAQRPNISDQQYAAIKPGMTYEQVLDIVKIPGKEAGSSGNVQVYTWGTEVYVYMVVTLV HHCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEHHHHHHH NGKVQSKSH CCCCCCCCC >Mature Secondary Structure ASMKQIGLYTGILGALASVAALVLPTQAVSHSSSGNNSPVISGNGNNVSYQSGFPDLET CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEECCCCCCHHH IRAQRPNISDQQYAAIKPGMTYEQVLDIVKIPGKEAGSSGNVQVYTWGTEVYVYMVVTLV HHCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEHHHHHHH NGKVQSKSH CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA