Click here to switch to the map view.

The map label for this gene is yafE [H]

Identifier: 77458118

GI number: 77458118

Start: 2160232

End: 2160999

Strand: Direct

Name: yafE [H]

Synonym: Pfl01_1891

Alternate gene names: 77458118

Gene position: 2160232-2160999 (Clockwise)

Preceding gene: 77458117

Following gene: 77458119

Centisome position: 33.55

GC content: 62.76

Gene sequence:

>768_bases
ATGACCAGCACCGCCCAGCACAGTCAGGTTGTACAAAAGCAATTCGGTGAACAGGCCGCCGCCTACCTGAGCAGCGCCGT
TCACGCTCAAGGCACTGAATTTGCGCTGCTGCAGGCTGAGCTGGCGGGGCAGGGCGAGGCGCGGGTGCTGGATCTGGGTT
GTGGCGCCGGGCACGTGAGTTTTCACGTCGCCTCGTTGGTGAAAGAAGTGGTGGCCTATGACCTGTCGCAGCAGATGCTC
GACGTGGTGGCCGCCGCTGCCGTTGATCGCGGCTTGAGCAACGTGTCCACGGTCAACGGCGCCGCCGAGCGTCTGCCGTT
TGCCGATGGCGAATTCGACTTCGTGTTCAGCCGCTATTCGGCGCACCATTGGAGCGATCTCGGCGTGGCCTTGCGCGAAG
TGCGCCGGGTGCTGAAACCGGGTGGCGTGGCGGCGTTCATCGATGTGCTGTCGCCGGGCAGTCCGCTGTTCGACACCTAT
TTGCAGAGCGTCGAAGTGCTGCGCGACACCAGCCATGTGCGCGATTATTCCGCCGGTGAGTGGCTGCGCCAGGTCAGCGA
GGCCGGTCTGCACACCCGCAGCACCACGCGTCAGCGCCTGCGTCTGGAGTACAACAGCTGGGTCGAGCGCATGCGCACAC
CCGAAGTGATGCGCGCCGCGATCCGCCAGTTGCAGCAATCGATGGGCAACGAAGTGCGCGAATATTTTGAGATTGAGGCC
GATGGTTCGTTCAGTACAGATGTACTGGTGCTCTGGGCCGAAAAGTAA

Upstream 100 bases:

>100_bases
ATGCGATTGCCGCGTTTGAAGCCAGGCATCGCGCGAGCCAGCCATGGTTGTTCCGCGACGCGTGAATCTGAAAGGTTGAA
ACCCAGAAAAGGACGTACCC

Downstream 100 bases:

>100_bases
GTTTCGAACGACAAGCATTTTTCCCGGCGCGCCCCTCGATGGCGCACCGACTGAAGACACGAGGAAAGCATGAGCAAGCA
GATTCTGATTCTCCCAGGCG

Product: UbiE/COQ5 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTSTAQHSQVVQKQFGEQAAAYLSSAVHAQGTEFALLQAELAGQGEARVLDLGCGAGHVSFHVASLVKEVVAYDLSQQML
DVVAAAAVDRGLSNVSTVNGAAERLPFADGEFDFVFSRYSAHHWSDLGVALREVRRVLKPGGVAAFIDVLSPGSPLFDTY
LQSVEVLRDTSHVRDYSAGEWLRQVSEAGLHTRSTTRQRLRLEYNSWVERMRTPEVMRAAIRQLQQSMGNEVREYFEIEA
DGSFSTDVLVLWAEK

Sequences:

>Translated_255_residues
MTSTAQHSQVVQKQFGEQAAAYLSSAVHAQGTEFALLQAELAGQGEARVLDLGCGAGHVSFHVASLVKEVVAYDLSQQML
DVVAAAAVDRGLSNVSTVNGAAERLPFADGEFDFVFSRYSAHHWSDLGVALREVRRVLKPGGVAAFIDVLSPGSPLFDTY
LQSVEVLRDTSHVRDYSAGEWLRQVSEAGLHTRSTTRQRLRLEYNSWVERMRTPEVMRAAIRQLQQSMGNEVREYFEIEA
DGSFSTDVLVLWAEK
>Mature_254_residues
TSTAQHSQVVQKQFGEQAAAYLSSAVHAQGTEFALLQAELAGQGEARVLDLGCGAGHVSFHVASLVKEVVAYDLSQQMLD
VVAAAAVDRGLSNVSTVNGAAERLPFADGEFDFVFSRYSAHHWSDLGVALREVRRVLKPGGVAAFIDVLSPGSPLFDTYL
QSVEVLRDTSHVRDYSAGEWLRQVSEAGLHTRSTTRQRLRLEYNSWVERMRTPEVMRAAIRQLQQSMGNEVREYFEIEAD
GSFSTDVLVLWAEK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=203, Percent_Identity=55.1724137931034, Blast_Score=228, Evalue=3e-61,
Organism=Escherichia coli, GI1786994, Length=130, Percent_Identity=34.6153846153846, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28120; Mature: 27989

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00369 PTS_HPR_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCEEEEEECC
>Mature Secondary Structure 
TSTAQHSQVVQKQFGEQAAAYLSSAVHAQGTEFALLQAELAGQGEARVLDLGCGAGHVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHH
FHVASLVKEVVAYDLSQQMLDVVAAAAVDRGLSNVSTVNGAAERLPFADGEFDFVFSRYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHCCCCCCCHHHHHHHHH
AHHWSDLGVALREVRRVLKPGGVAAFIDVLSPGSPLFDTYLQSVEVLRDTSHVRDYSAGE
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
WLRQVSEAGLHTRSTTRQRLRLEYNSWVERMRTPEVMRAAIRQLQQSMGNEVREYFEIEA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
DGSFSTDVLVLWAEK
CCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]