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The map label for this gene is glxA [H]

Identifier: 77458063

GI number: 77458063

Start: 2054371

End: 2055354

Strand: Direct

Name: glxA [H]

Synonym: Pfl01_1836

Alternate gene names: 77458063

Gene position: 2054371-2055354 (Clockwise)

Preceding gene: 77458059

Following gene: 77458069

Centisome position: 31.91

GC content: 64.13

Gene sequence:

>984_bases
ATGCCGAAAACCATCCACGTCCTCGCGTTCGCCAATGTGCAATTGCTCGATGTCACCGGGCCGTTACAGGTCTTCGCCTC
GGCCAACGATATCGCCCGCCAGCAGGGATTGCCTGCGCCGTATGCGCCAACGGTCATCGCCAGCGGTGGCGGGGCGGTGA
ACTCGTCCGCCGGGTTGGCGATGCTGGCCGAACCGCTGCCGAAACAGCCCAGCGATACGCTGATCATCGCCGGAGGCTGG
GGCGTTTATGCCGCTGCCGAAGACGCCGGGTTGGTGAATTGGGTGCGTGAACATGCGAATGGCTGTCGGCGCGTGGCCTC
GGTCTGCACCGGCGCATTTCTGCTGGCGGCCAGCGGCTGGCTCGACGGTCGCCGGGTCGTCACTCACTGGACCCGTTGCG
AACAACTGGCGCAGCAACACCCGCAATTAAAGGTCGAACCGAATCCGATCTTCATCAACGACGGACCGGTCTGGACCTCG
GCGGGCGTCACCGCCGGCATCGACCTGGCGCTGGCCATGGTCGAAGACGACCTCGGCCGCGACATGGCTCTGGACGTTGC
CCGGCAACTGGTGGTGTTCCTCAAGCGCCCGGGCGGGCAGTCGCAATTCAGCGTGACACTGTCACTGCAAAAACAGGGCA
ACCGCTTTGATGATCTGCACGCGTGGATCGCCGAACACCTGACCCGCGACCTGGGCATCCCGACCCTCGCCGAACAGGCC
GGCATGAGCGAGCGCAGCTTCGTGCGCCACTACCGCGCCGACACCGGCCAGACCCCGGCCCGCGCCATCGAATTGATCCG
CGTCGAAACCGCCCGCCGGTTGCTGAGCGATACCGGATTGCCGATTAAACGGGTGGCGGCCAATTGTGGATTTGGCAGTG
AAGAGACGTTAAGACGCAGTTTCCTGCGAGCCATAGGTGTGACGCCGCAGGCGTATCGGGAGCGGTTTTCGGTCAGTGCC
GCAGCAGATCCAGTAATGCCTTGA

Upstream 100 bases:

>100_bases
TGCAACGCCATGGTTCTTCTCCGTGAAAAGGGGGTAGACGGCTTCACTGTAGGCGCGTAGGTTTTGGCGCATACGCCAAT
CAGCCCACGAATTACGCCAA

Downstream 100 bases:

>100_bases
GCGTTTCGCCCGGTGCTTCCTCGGGAATGTTATGCCCGACACCCGCCAACACCCGCCGCTCGTAAAGTCCGTTGAAGTGG
TGCGCATCGTCATCGTCCGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MPKTIHVLAFANVQLLDVTGPLQVFASANDIARQQGLPAPYAPTVIASGGGAVNSSAGLAMLAEPLPKQPSDTLIIAGGW
GVYAAAEDAGLVNWVREHANGCRRVASVCTGAFLLAASGWLDGRRVVTHWTRCEQLAQQHPQLKVEPNPIFINDGPVWTS
AGVTAGIDLALAMVEDDLGRDMALDVARQLVVFLKRPGGQSQFSVTLSLQKQGNRFDDLHAWIAEHLTRDLGIPTLAEQA
GMSERSFVRHYRADTGQTPARAIELIRVETARRLLSDTGLPIKRVAANCGFGSEETLRRSFLRAIGVTPQAYRERFSVSA
AADPVMP

Sequences:

>Translated_327_residues
MPKTIHVLAFANVQLLDVTGPLQVFASANDIARQQGLPAPYAPTVIASGGGAVNSSAGLAMLAEPLPKQPSDTLIIAGGW
GVYAAAEDAGLVNWVREHANGCRRVASVCTGAFLLAASGWLDGRRVVTHWTRCEQLAQQHPQLKVEPNPIFINDGPVWTS
AGVTAGIDLALAMVEDDLGRDMALDVARQLVVFLKRPGGQSQFSVTLSLQKQGNRFDDLHAWIAEHLTRDLGIPTLAEQA
GMSERSFVRHYRADTGQTPARAIELIRVETARRLLSDTGLPIKRVAANCGFGSEETLRRSFLRAIGVTPQAYRERFSVSA
AADPVMP
>Mature_326_residues
PKTIHVLAFANVQLLDVTGPLQVFASANDIARQQGLPAPYAPTVIASGGGAVNSSAGLAMLAEPLPKQPSDTLIIAGGWG
VYAAAEDAGLVNWVREHANGCRRVASVCTGAFLLAASGWLDGRRVVTHWTRCEQLAQQHPQLKVEPNPIFINDGPVWTSA
GVTAGIDLALAMVEDDLGRDMALDVARQLVVFLKRPGGQSQFSVTLSLQKQGNRFDDLHAWIAEHLTRDLGIPTLAEQAG
MSERSFVRHYRADTGQTPARAIELIRVETARRLLSDTGLPIKRVAANCGFGSEETLRRSFLRAIGVTPQAYRERFSVSAA
ADPVMP

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786496, Length=96, Percent_Identity=34.375, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35163; Mature: 35031

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTIHVLAFANVQLLDVTGPLQVFASANDIARQQGLPAPYAPTVIASGGGAVNSSAGLA
CCCEEEEEEECCEEEEECCCHHHHHHCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHH
MLAEPLPKQPSDTLIIAGGWGVYAAAEDAGLVNWVREHANGCRRVASVCTGAFLLAASGW
HHHCCCCCCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LDGRRVVTHWTRCEQLAQQHPQLKVEPNPIFINDGPVWTSAGVTAGIDLALAMVEDDLGR
CCCCHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCEEECCCCHHHHHHHHHHHHHHCCC
DMALDVARQLVVFLKRPGGQSQFSVTLSLQKQGNRFDDLHAWIAEHLTRDLGIPTLAEQA
HHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHC
GMSERSFVRHYRADTGQTPARAIELIRVETARRLLSDTGLPIKRVAANCGFGSEETLRRS
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHH
FLRAIGVTPQAYRERFSVSAAADPVMP
HHHHHCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PKTIHVLAFANVQLLDVTGPLQVFASANDIARQQGLPAPYAPTVIASGGGAVNSSAGLA
CCEEEEEEECCEEEEECCCHHHHHHCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHH
MLAEPLPKQPSDTLIIAGGWGVYAAAEDAGLVNWVREHANGCRRVASVCTGAFLLAASGW
HHHCCCCCCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LDGRRVVTHWTRCEQLAQQHPQLKVEPNPIFINDGPVWTSAGVTAGIDLALAMVEDDLGR
CCCCHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCEEECCCCHHHHHHHHHHHHHHCCC
DMALDVARQLVVFLKRPGGQSQFSVTLSLQKQGNRFDDLHAWIAEHLTRDLGIPTLAEQA
HHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHC
GMSERSFVRHYRADTGQTPARAIELIRVETARRLLSDTGLPIKRVAANCGFGSEETLRRS
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHH
FLRAIGVTPQAYRERFSVSAAADPVMP
HHHHHCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]