| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458069
Identifier: 77458069
GI number: 77458069
Start: 2060972
End: 2062144
Strand: Direct
Name: 77458069
Synonym: Pfl01_1842
Alternate gene names: NA
Gene position: 2060972-2062144 (Clockwise)
Preceding gene: 77458063
Following gene: 77458071
Centisome position: 32.01
GC content: 65.64
Gene sequence:
>1173_bases ATGGCAAACCCTTACCGCGAGTTGTTCAACGCCCCCGGCGCCCGGGCTTTTGTGATGGCCGCGATGATCGCGCGCATGCC GATTTCCATGACCGGCATCGGTGTCATCACCATGCTCTCGCAATTGACCGGCGGTTACGCGCTGGCGGGTGGGGTGGCGG CGACGTTTGCGTTGGCCACGGCGTTTTGCGCGCCGCAGGTGTCACGGCTGGTGGACCGTTTCGGCCAGGGTCGGGTGCTG CCGGTGGCGGCGCTGATCGGCGGGGGCGCGCTGCTGATGTTGCTGCTGTGCACCCGTTTGCAGGCGCCGACCTGGACCCT GTTTGTGTGCGCAGCATTGGCCGGTTGCATGCCGAGCATGTCGGCGATGGCGCGGGCACGCTGGACCGAAATCTATCGCG GCCAGCCGCAATTGCAGACCGCTTATGCATTGGAGTCGGTGCTCGACGAAGTCTGTTTCATCGTCGGCCCGCCGTTGTCG GTGGGCTTGTGCGTCGGCGTGTTTCCCGAGGCCGGGCCACTGGCGGCGCTGTTGATGCTGGCGATTGGCGTCACAGCGTT CGTCGCCCAGCGCAGCACCGAGCCGCCGGTGCATCCGCACGAATCGCAGCATCAAGGTTCGATCATTCGTTCCACCGACG TGCAATGGCTGCTGGCGTTGATGCTCGCCATGGGCGTGATTGTCGGCGTGGTGGATGTGGTCAGCGTCGCGTTCGCCCAG CAGCAGGAGCAGCCGGCGGCGGCGAGCATCGTGCTGTCGGTGTATGCCATCGGCTCCTGTCTGGCCGGGATTGCCTTCGG CGCGATGCGCTCGAAGCTGCCGTTGCCGCGCCTGTTTCTCTACGGCGGTCTGGCGACAGCGGTGACAACGCTGCCGTTGT TGCTGGCGAGCAACATTTTCGGGTTGGCCGTCGCGGTGTTCATTGCCGGGCTGTTCTTCTCGCCGACCCTGATCGTGGCG ATGGCGTTGATCGAGCGCATCGTACCGCCGGCCAAACTCACCGAAGGCCTGACCTGGCTGGTGACCGGTTTGAGCATTGG CGTCGCCATCGGTGCCGCCGGTTCCGGCGCACTGGTGGATGCGTTCGGTGCCCGCAGCGGCTTCTGGCTGGCGATTGCCG CCGGGGCAGTGGTGCTGGGCTCGGCGGTGCAGAGCTTTCGTCACCTCAAATAA
Upstream 100 bases:
>100_bases TTTCGCGGGTGCATTCCCTTCACATTCCACCAACAATTCCTCGCTTCCCCGCCCGTCAGGCTTTGTGGCAACTTGGCCGC CCCTGATGAGGCTGCATCCG
Downstream 100 bases:
>100_bases TGCCGGTTACCAGCCCCGGCCCGAGTTCACCCAGAAATTGACCGACAGCGACGTCGACACCGATTCCACCTGATGGAACC AGCCTTCGGGCAGGAACAGC
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Transporter; ABC Transporter Permease Protein; ABC Transporter Permease; ABC Transporter; Facilitator Superfamily Transporter Permease; Facilitator Superfamily Permease; MFS Family Transmembrane Protein; ABC Transporter Integral Membrane Protein; Permease; Mfs Transporter; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transporter; LOW QUALITY PROTEIN MFS Superfamily Transporter; Facilitator MFS1 Protein; Transporter-Like Membrane Protein; Efflux Protein; Integral Membrane Protein; Permease Of Facilitator Superfamily; Transmembrane Transporter; Transporter Facilitator Family Protein; MFS-Family Transporter; MFS Family Transporter; ABC Transporter Membrane Spanning Protein; MFS Superfamily Transporter
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MANPYRELFNAPGARAFVMAAMIARMPISMTGIGVITMLSQLTGGYALAGGVAATFALATAFCAPQVSRLVDRFGQGRVL PVAALIGGGALLMLLLCTRLQAPTWTLFVCAALAGCMPSMSAMARARWTEIYRGQPQLQTAYALESVLDEVCFIVGPPLS VGLCVGVFPEAGPLAALLMLAIGVTAFVAQRSTEPPVHPHESQHQGSIIRSTDVQWLLALMLAMGVIVGVVDVVSVAFAQ QQEQPAAASIVLSVYAIGSCLAGIAFGAMRSKLPLPRLFLYGGLATAVTTLPLLLASNIFGLAVAVFIAGLFFSPTLIVA MALIERIVPPAKLTEGLTWLVTGLSIGVAIGAAGSGALVDAFGARSGFWLAIAAGAVVLGSAVQSFRHLK
Sequences:
>Translated_390_residues MANPYRELFNAPGARAFVMAAMIARMPISMTGIGVITMLSQLTGGYALAGGVAATFALATAFCAPQVSRLVDRFGQGRVL PVAALIGGGALLMLLLCTRLQAPTWTLFVCAALAGCMPSMSAMARARWTEIYRGQPQLQTAYALESVLDEVCFIVGPPLS VGLCVGVFPEAGPLAALLMLAIGVTAFVAQRSTEPPVHPHESQHQGSIIRSTDVQWLLALMLAMGVIVGVVDVVSVAFAQ QQEQPAAASIVLSVYAIGSCLAGIAFGAMRSKLPLPRLFLYGGLATAVTTLPLLLASNIFGLAVAVFIAGLFFSPTLIVA MALIERIVPPAKLTEGLTWLVTGLSIGVAIGAAGSGALVDAFGARSGFWLAIAAGAVVLGSAVQSFRHLK >Mature_389_residues ANPYRELFNAPGARAFVMAAMIARMPISMTGIGVITMLSQLTGGYALAGGVAATFALATAFCAPQVSRLVDRFGQGRVLP VAALIGGGALLMLLLCTRLQAPTWTLFVCAALAGCMPSMSAMARARWTEIYRGQPQLQTAYALESVLDEVCFIVGPPLSV GLCVGVFPEAGPLAALLMLAIGVTAFVAQRSTEPPVHPHESQHQGSIIRSTDVQWLLALMLAMGVIVGVVDVVSVAFAQQ QEQPAAASIVLSVYAIGSCLAGIAFGAMRSKLPLPRLFLYGGLATAVTTLPLLLASNIFGLAVAVFIAGLFFSPTLIVAM ALIERIVPPAKLTEGLTWLVTGLSIGVAIGAAGSGALVDAFGARSGFWLAIAAGAVVLGSAVQSFRHLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40339; Mature: 40207
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPYRELFNAPGARAFVMAAMIARMPISMTGIGVITMLSQLTGGYALAGGVAATFALAT CCCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AFCAPQVSRLVDRFGQGRVLPVAALIGGGALLMLLLCTRLQAPTWTLFVCAALAGCMPSM HHHHHHHHHHHHHHCCCCEEHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SAMARARWTEIYRGQPQLQTAYALESVLDEVCFIVGPPLSVGLCVGVFPEAGPLAALLML HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHH AIGVTAFVAQRSTEPPVHPHESQHQGSIIRSTDVQWLLALMLAMGVIVGVVDVVSVAFAQ HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QQEQPAAASIVLSVYAIGSCLAGIAFGAMRSKLPLPRLFLYGGLATAVTTLPLLLASNIF HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GLAVAVFIAGLFFSPTLIVAMALIERIVPPAKLTEGLTWLVTGLSIGVAIGAAGSGALVD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AFGARSGFWLAIAAGAVVLGSAVQSFRHLK HHCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANPYRELFNAPGARAFVMAAMIARMPISMTGIGVITMLSQLTGGYALAGGVAATFALAT CCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AFCAPQVSRLVDRFGQGRVLPVAALIGGGALLMLLLCTRLQAPTWTLFVCAALAGCMPSM HHHHHHHHHHHHHHCCCCEEHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SAMARARWTEIYRGQPQLQTAYALESVLDEVCFIVGPPLSVGLCVGVFPEAGPLAALLML HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHH AIGVTAFVAQRSTEPPVHPHESQHQGSIIRSTDVQWLLALMLAMGVIVGVVDVVSVAFAQ HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QQEQPAAASIVLSVYAIGSCLAGIAFGAMRSKLPLPRLFLYGGLATAVTTLPLLLASNIF HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GLAVAVFIAGLFFSPTLIVAMALIERIVPPAKLTEGLTWLVTGLSIGVAIGAAGSGALVD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AFGARSGFWLAIAAGAVVLGSAVQSFRHLK HHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA