| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is apt
Identifier: 77458037
GI number: 77458037
Start: 2023103
End: 2023651
Strand: Reverse
Name: apt
Synonym: Pfl01_1810
Alternate gene names: 77458037
Gene position: 2023651-2023103 (Counterclockwise)
Preceding gene: 77458038
Following gene: 77458031
Centisome position: 31.43
GC content: 61.02
Gene sequence:
>549_bases ATGGTCTTCGACTCCTTCGACATCAAATCCCTGATCCGCCCCGTGATCGACTTCCCGAAACCGGGCGTGATCTTTCGCGA CATCACCCCGCTGTTCCAGTCGCCCAAGGCCCTGCGCCTGGTGATGGACAGCTTCGCCCACCGCTATGTTGAAGCCGACT TCACCCACATCGGCGCGATGGATGCGCGTGGTTTCCTGATCGGTTCGGTGCTGGCTTATCAACTGAACAAGCCGCTGGTG CTGTTCCGCAAGCAAGGCAAACTGCCGGCGGACGTGCTGGCCGAAGGTTACGCGACCGAGTACGGCGAAGCGTTCCTCGA AGTGCACGCCGACAGCCTGTGCGAAGGCGATTCGGTGGTGATGTTCGATGACCTGATCGCCACCGGCGGCACGCTGATCG CGGCGGCCAACCTGATCCGCCGCATGGGCGCCCGCGTTCATGAAGCGGCGGCGATCATTGATCTGCCGGAGCTGGGTGGT TCGCAGCGTCTTGAGGACATGGGGATTCCGACGTTCTGCCTGACGCAGTTTGCGTTGACTGATAAATAA
Upstream 100 bases:
>100_bases CGGCGGCTCGCTCGAAGTCTGATCTCGACCCGCGGCCGAGCGTATCGTTTCAGCCGCGGGTATACTGCGCCGTTTGCAGC CCTGCCAGGACACCTCGACG
Downstream 100 bases:
>100_bases TCAGCCCCGCGCCTCGATCGTTCCCACGCTCCGCGTGGGAACGATCAAACACCGAAGATTACAGTCCCATCTGCTTGCTG ATGATCTCGTTCATCACTTC
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MVFDSFDIKSLIRPVIDFPKPGVIFRDITPLFQSPKALRLVMDSFAHRYVEADFTHIGAMDARGFLIGSVLAYQLNKPLV LFRKQGKLPADVLAEGYATEYGEAFLEVHADSLCEGDSVVMFDDLIATGGTLIAAANLIRRMGARVHEAAAIIDLPELGG SQRLEDMGIPTFCLTQFALTDK
Sequences:
>Translated_182_residues MVFDSFDIKSLIRPVIDFPKPGVIFRDITPLFQSPKALRLVMDSFAHRYVEADFTHIGAMDARGFLIGSVLAYQLNKPLV LFRKQGKLPADVLAEGYATEYGEAFLEVHADSLCEGDSVVMFDDLIATGGTLIAAANLIRRMGARVHEAAAIIDLPELGG SQRLEDMGIPTFCLTQFALTDK >Mature_182_residues MVFDSFDIKSLIRPVIDFPKPGVIFRDITPLFQSPKALRLVMDSFAHRYVEADFTHIGAMDARGFLIGSVLAYQLNKPLV LFRKQGKLPADVLAEGYATEYGEAFLEVHADSLCEGDSVVMFDDLIATGGTLIAAANLIRRMGARVHEAAAIIDLPELGG SQRLEDMGIPTFCLTQFALTDK
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=174, Percent_Identity=41.3793103448276, Blast_Score=130, Evalue=7e-31, Organism=Homo sapiens, GI71773201, Length=126, Percent_Identity=43.6507936507937, Blast_Score=102, Evalue=2e-22, Organism=Escherichia coli, GI1786675, Length=170, Percent_Identity=46.4705882352941, Blast_Score=157, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17509087, Length=181, Percent_Identity=39.7790055248619, Blast_Score=126, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6323619, Length=172, Percent_Identity=31.3953488372093, Blast_Score=86, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6320649, Length=162, Percent_Identity=30.8641975308642, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI17136334, Length=167, Percent_Identity=38.3233532934132, Blast_Score=97, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_PSEPF (Q3KFA3)
Other databases:
- EMBL: CP000094 - RefSeq: YP_347542.1 - HSSP: P07741 - ProteinModelPortal: Q3KFA3 - SMR: Q3KFA3 - STRING: Q3KFA3 - GeneID: 3716416 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_1810 - eggNOG: COG0503 - HOGENOM: HBG703830 - OMA: GILFYDI - ProtClustDB: PRK02304 - BioCyc: PFLU205922:PFL_1810-MONOMER - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836 - TIGRFAMs: TIGR01090
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 19979; Mature: 19979
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFDSFDIKSLIRPVIDFPKPGVIFRDITPLFQSPKALRLVMDSFAHRYVEADFTHIGAM CCCCCCCHHHHHHHHHCCCCCCEEHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC DARGFLIGSVLAYQLNKPLVLFRKQGKLPADVLAEGYATEYGEAFLEVHADSLCEGDSVV CCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE MFDDLIATGGTLIAAANLIRRMGARVHEAAAIIDLPELGGSQRLEDMGIPTFCLTQFALT EEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHCCCCHHHHHHHHHC DK CC >Mature Secondary Structure MVFDSFDIKSLIRPVIDFPKPGVIFRDITPLFQSPKALRLVMDSFAHRYVEADFTHIGAM CCCCCCCHHHHHHHHHCCCCCCEEHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC DARGFLIGSVLAYQLNKPLVLFRKQGKLPADVLAEGYATEYGEAFLEVHADSLCEGDSVV CCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE MFDDLIATGGTLIAAANLIRRMGARVHEAAAIIDLPELGGSQRLEDMGIPTFCLTQFALT EEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHCCCCHHHHHHHHHC DK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA