| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is anr [H]
Identifier: 77458038
GI number: 77458038
Start: 2023730
End: 2024464
Strand: Reverse
Name: anr [H]
Synonym: Pfl01_1811
Alternate gene names: 77458038
Gene position: 2024464-2023730 (Counterclockwise)
Preceding gene: 77458040
Following gene: 77458037
Centisome position: 31.44
GC content: 60.27
Gene sequence:
>735_bases ATGTCCGAGCCAGTTAAACTGCGCGCTCACAACCAGGCTAATTGCAAGGATTGCAGCCTGGCCCCTCTCTGCCTGCCACT TTCGCTGAATCTGGAAGACATGGATGCGCTGGACGAAATCGTTAAACGTGGCCGCCCGTTGAAAAAGGGTGAGTTCCTGT TCCGTCAGGGCGATACCTTCGATTCCGTTTATGCAGTACGCTCCGGCGCCCTCAAGACCTTCAGCCTGAGCGACACCGGC GAAGAGCAACTGACCGGCTTCCACCTGCCGAGCGAACTGGTCGGGCTGTCCGGCATGGACACCGAGAAACACCCGGTCTC CGCCCAGGCGCTGGAAACCACTTCGGTCTGCGAGATTCCGTTCGAACGCCTCGACGAACTGGCCCTGCAATTGCCGCAGC TGCGCCGTCAGTTGATGCGTGTGATGAGCCGCGAAATTCGCGACGACCAGCAAATGATGTTGCTGCTGTCGAAGAAAACC GCCGACGAGCGCATCGCCACCTTCCTGGTCAACCTGTCGGCGCGTTTCCGCGCTCGCGGCTTCTCGGCCAACCAGTTCCG CCTGAGCATGTCGCGCAATGAAATCGGCAACTACCTGGGGCTGGCGGTGGAAACCGTGTCCCGGGTCTTCACCCGCTTCC AACAGAACGAACTGATCGCCGCCGAGGGCAAGGAAATCCATATTCTCGACCCGATCCAGCTCTGTGCCCTGGCCGGCGGC TCGCTCGAAGTCTGA
Upstream 100 bases:
>100_bases GCTTTATGCCGAGGGGGCAATCTCGCCCCAAGCTGGCCTGAATGTCCTCCGCTGGGTTACCCTTACGCCTTATGTGTGTT TTCCCACAAGGATCCAAGAA
Downstream 100 bases:
>100_bases TCTCGACCCGCGGCCGAGCGTATCGTTTCAGCCGCGGGTATACTGCGCCGTTTGCAGCCCTGCCAGGACACCTCGACGAT GGTCTTCGACTCCTTCGACA
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSEPVKLRAHNQANCKDCSLAPLCLPLSLNLEDMDALDEIVKRGRPLKKGEFLFRQGDTFDSVYAVRSGALKTFSLSDTG EEQLTGFHLPSELVGLSGMDTEKHPVSAQALETTSVCEIPFERLDELALQLPQLRRQLMRVMSREIRDDQQMMLLLSKKT ADERIATFLVNLSARFRARGFSANQFRLSMSRNEIGNYLGLAVETVSRVFTRFQQNELIAAEGKEIHILDPIQLCALAGG SLEV
Sequences:
>Translated_244_residues MSEPVKLRAHNQANCKDCSLAPLCLPLSLNLEDMDALDEIVKRGRPLKKGEFLFRQGDTFDSVYAVRSGALKTFSLSDTG EEQLTGFHLPSELVGLSGMDTEKHPVSAQALETTSVCEIPFERLDELALQLPQLRRQLMRVMSREIRDDQQMMLLLSKKT ADERIATFLVNLSARFRARGFSANQFRLSMSRNEIGNYLGLAVETVSRVFTRFQQNELIAAEGKEIHILDPIQLCALAGG SLEV >Mature_243_residues SEPVKLRAHNQANCKDCSLAPLCLPLSLNLEDMDALDEIVKRGRPLKKGEFLFRQGDTFDSVYAVRSGALKTFSLSDTGE EQLTGFHLPSELVGLSGMDTEKHPVSAQALETTSVCEIPFERLDELALQLPQLRRQLMRVMSREIRDDQQMMLLLSKKTA DERIATFLVNLSARFRARGFSANQFRLSMSRNEIGNYLGLAVETVSRVFTRFQQNELIAAEGKEIHILDPIQLCALAGGS LEV
Specific function: Transcriptional activator of anaerobic gene expression [H]
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH crp-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787595, Length=231, Percent_Identity=51.9480519480519, Blast_Score=265, Evalue=1e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018490 - InterPro: IPR000595 - InterPro: IPR001808 - InterPro: IPR012318 - InterPro: IPR014710 - InterPro: IPR018335 - InterPro: IPR011991 [H]
Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]
EC number: NA
Molecular weight: Translated: 27302; Mature: 27171
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS50042 CNMP_BINDING_3 ; PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPVKLRAHNQANCKDCSLAPLCLPLSLNLEDMDALDEIVKRGRPLKKGEFLFRQGDTF CCCCCEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCH DSVYAVRSGALKTFSLSDTGEEQLTGFHLPSELVGLSGMDTEKHPVSAQALETTSVCEIP HHHHHHHHCCEEEEECCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCHHHHCC FERLDELALQLPQLRRQLMRVMSREIRDDQQMMLLLSKKTADERIATFLVNLSARFRARG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC FSANQFRLSMSRNEIGNYLGLAVETVSRVFTRFQQNELIAAEGKEIHILDPIQLCALAGG CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECHHHHHHHCCC SLEV CCCC >Mature Secondary Structure SEPVKLRAHNQANCKDCSLAPLCLPLSLNLEDMDALDEIVKRGRPLKKGEFLFRQGDTF CCCCEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCH DSVYAVRSGALKTFSLSDTGEEQLTGFHLPSELVGLSGMDTEKHPVSAQALETTSVCEIP HHHHHHHHCCEEEEECCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCHHHHCC FERLDELALQLPQLRRQLMRVMSREIRDDQQMMLLLSKKTADERIATFLVNLSARFRARG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC FSANQFRLSMSRNEIGNYLGLAVETVSRVFTRFQQNELIAAEGKEIHILDPIQLCALAGG CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECHHHHHHHCCC SLEV CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1787797; 1787798; 10984043 [H]