Click here to switch to the map view.

The map label for this gene is ybaB [C]

Identifier: 77458033

GI number: 77458033

Start: 2019634

End: 2019972

Strand: Direct

Name: ybaB [C]

Synonym: Pfl01_1806

Alternate gene names: 77458033

Gene position: 2019634-2019972 (Clockwise)

Preceding gene: 77458032

Following gene: 77458034

Centisome position: 31.37

GC content: 59.88

Gene sequence:

>339_bases
ATGATGAAAGGTGGCATGGCCGGCCTGATGAAGCAGGCGCAGCAGATGCAGGAAAAAATGGCCAAGATGCAGGAAGAACT
GGCCAACGCCGAAGTCACTGGCAAAGCCGGTGGCGATCTGGTCACCGTGGTGATGACCGGTCGTCATGACGTGAAAAAAG
TCAGCATCGACCCGAGCGTACTGCCGGGCCTGGACGAAGATGACCGCGAAGTGGTCGAGGATCTGGTGGCCGCTGCCGTC
AACGCCGCCGTGCGTCAGATCGAAGCCAACAGCCAGGCGAAAATGGGCAGCATGACCGCCGGCATGAACCTGCCGGCCGG
TATGAAACTGCCGTTCTGA

Upstream 100 bases:

>100_bases
GAACCTGTCGACGCCCTGGTCAGTCAGGGCTAATAACTGAGGGCGTCCGGCCTGTCTGGCCGGGCGCTGTTTTGATCCAA
GTACTTTTGAGGTGATTCCC

Downstream 100 bases:

>100_bases
TTCGCCTTTGCGGGTTGGATGAGCTACAAAAAATGCCAGGCATCGCGCCTGGCATTTTTGTTTCCGGCTGACGAAACATC
GAACGCGCAATAGCTGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MMKGGMAGLMKQAQQMQEKMAKMQEELANAEVTGKAGGDLVTVVMTGRHDVKKVSIDPSVLPGLDEDDREVVEDLVAAAV
NAAVRQIEANSQAKMGSMTAGMNLPAGMKLPF

Sequences:

>Translated_112_residues
MMKGGMAGLMKQAQQMQEKMAKMQEELANAEVTGKAGGDLVTVVMTGRHDVKKVSIDPSVLPGLDEDDREVVEDLVAAAV
NAAVRQIEANSQAKMGSMTAGMNLPAGMKLPF
>Mature_112_residues
MMKGGMAGLMKQAQQMQEKMAKMQEELANAEVTGKAGGDLVTVVMTGRHDVKKVSIDPSVLPGLDEDDREVVEDLVAAAV
NAAVRQIEANSQAKMGSMTAGMNLPAGMKLPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=110, Percent_Identity=58.1818181818182, Blast_Score=129, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1806_PSEPF (Q3KFA7)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_347538.1
- ProteinModelPortal:   Q3KFA7
- SMR:   Q3KFA7
- STRING:   Q3KFA7
- GeneID:   3716567
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_1806
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- ProtClustDB:   PRK00153
- BioCyc:   PFLU205922:PFL_1806-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11847; Mature: 11847

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.7 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
10.7 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKGGMAGLMKQAQQMQEKMAKMQEELANAEVTGKAGGDLVTVVMTGRHDVKKVSIDPSV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEECCCCCC
LPGLDEDDREVVEDLVAAAVNAAVRQIEANSQAKMGSMTAGMNLPAGMKLPF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMKGGMAGLMKQAQQMQEKMAKMQEELANAEVTGKAGGDLVTVVMTGRHDVKKVSIDPSV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEECCCCCC
LPGLDEDDREVVEDLVAAAVNAAVRQIEANSQAKMGSMTAGMNLPAGMKLPF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA