| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is hcrC [H]
Identifier: 77458024
GI number: 77458024
Start: 2003498
End: 2004952
Strand: Reverse
Name: hcrC [H]
Synonym: Pfl01_1797
Alternate gene names: 77458024
Gene position: 2004952-2003498 (Counterclockwise)
Preceding gene: 77458031
Following gene: 77458023
Centisome position: 31.14
GC content: 62.82
Gene sequence:
>1455_bases GTGATCCAGTTTTTACTTAACCAGGAACTCCGTAGCGAGCACGCCCTGGACCCGAACCTGACTGTGCTCAACTACCTGCG CGAACACGTGGGTAAATCCGGCACCAAAGAAGGCTGCGCCAGCGGTGACTGCGGCGCGTGTACGGTGGTGGTCGGCGAGT TGCAGACGGATGACGATGGCCGCGAGCACATTCGCTATCGCAGCCTCAACTCGTGTCTGACGTTCGTTTCGTCGCTGCAC GGCAAGCAATTGATCAGCGTCGAAGACCTCAAGCACAAGGGCGAACTGCACAGCGTGCAGAAAGCCATGGTCGAGTGCCA CGGTTCGCAGTGCGGTTTCTGCACCCCCGGTTTCGTGATGTCGCTGTTCGCCCTGCAAAAGAACAGCGATGCACCGGATC AGGCCAAGGCCCACGAAGCGCTGGCCGGCAACCTCTGCCGCTGCACCGGCTACCGGCCGATCCTGGCCGCCGCTGAACAA TCCTGCTGCGGCAAGCAACCGGACCAGTTCGACGCCCGTGAAGCCGAAACCATCGCCCGCCTCAAAGCCATTGCTCCGAC GTCGATCGGCGAACTCAACAGCGGCGACAAACGCTGCCTGGTGCCGCTGACCGTGGCCGATCTGGCCGATCTCTACGACG CTTATCCACAGGCCCGCCTGCTGGCCGGCGGCACCGATCTGGCACTGGAAGTCACTCAGTTCCACCGCACGTTGCCGGTG ATGATCTACGTCGGCAACGTCGCCGAAATGAAGCGCATCGAGCACTTCGATGACCGCATCGAAATCGGCGCCGCCACCGC CCTCTCCGACTGCTACGAAGCGCTGAACGCCGAGTACCCGGATTTCGGCGAACTGCTGCACCGCTTCGCCTCCCTGCAGA TCCGCAACCAGGGCACTTTGGGCGGCAACATCGGCAACGCCTCGCCGATTGGTGACTCGCCACCGCTGCTGATCGCCCTC GGCGCGCAGATCGTGCTGTGCAAGGGCGAGACCCGCCGCACGCTGGCCCTCGAGGATTACTTCATCGATTACCGGGTCAC CGCGCGTCAGGAAAGCGAGTTCATCGAGAAAATCATCGTGCCGCGCGCCACGACCGAGCAGCGCTTCCGCGCCTACAAAG TCTCCAAGCGTCTGGACGACGACATCTCTGCCGTCTGCGCCGCGTTCAACCTGCGGGTCGAGAACGGCGTGATCACCGAC GCCCGCGTCGCCTTCGGTGGCATGGCTGCGATCCCGAAACGCGCCGCTCATTGCGAAGCCGTGCTGCTCGGCCAGCCGTT CAACAACGCTGTGGTCGAACGTGCCTGCACCGCGCTGGGCGAGGATTTCACCCCGCTCTCGGACTTCCGCGCCAGCAAGG AATACCGCCTGCTCAGCGCGCAGAACCTGCTGCGCAAATACTTCATCGAACTGCAAACACCGCACATCGAGACTCGGGTG ACCGCTTATGTCTAA
Upstream 100 bases:
>100_bases TTTCCTGACCTTTAAGTCAGAAAACCATTGACCGAAAAGTCAGACCTGCTAAATTCGGCTCAAGTCGCTCAACAACAATA ATGAGTCTGCGAGGCCTTCC
Downstream 100 bases:
>100_bases TCATCACGGCGTAGAGAAAACGCAAGCTGAACTGGCTGAACTGTTCGCCAAAGACCTGACCACCGGCGTCGGCCGCAGCG TCAAGCACGACAGCGCCGCC
Product: molybdopterin dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MIQFLLNQELRSEHALDPNLTVLNYLREHVGKSGTKEGCASGDCGACTVVVGELQTDDDGREHIRYRSLNSCLTFVSSLH GKQLISVEDLKHKGELHSVQKAMVECHGSQCGFCTPGFVMSLFALQKNSDAPDQAKAHEALAGNLCRCTGYRPILAAAEQ SCCGKQPDQFDAREAETIARLKAIAPTSIGELNSGDKRCLVPLTVADLADLYDAYPQARLLAGGTDLALEVTQFHRTLPV MIYVGNVAEMKRIEHFDDRIEIGAATALSDCYEALNAEYPDFGELLHRFASLQIRNQGTLGGNIGNASPIGDSPPLLIAL GAQIVLCKGETRRTLALEDYFIDYRVTARQESEFIEKIIVPRATTEQRFRAYKVSKRLDDDISAVCAAFNLRVENGVITD ARVAFGGMAAIPKRAAHCEAVLLGQPFNNAVVERACTALGEDFTPLSDFRASKEYRLLSAQNLLRKYFIELQTPHIETRV TAYV
Sequences:
>Translated_484_residues MIQFLLNQELRSEHALDPNLTVLNYLREHVGKSGTKEGCASGDCGACTVVVGELQTDDDGREHIRYRSLNSCLTFVSSLH GKQLISVEDLKHKGELHSVQKAMVECHGSQCGFCTPGFVMSLFALQKNSDAPDQAKAHEALAGNLCRCTGYRPILAAAEQ SCCGKQPDQFDAREAETIARLKAIAPTSIGELNSGDKRCLVPLTVADLADLYDAYPQARLLAGGTDLALEVTQFHRTLPV MIYVGNVAEMKRIEHFDDRIEIGAATALSDCYEALNAEYPDFGELLHRFASLQIRNQGTLGGNIGNASPIGDSPPLLIAL GAQIVLCKGETRRTLALEDYFIDYRVTARQESEFIEKIIVPRATTEQRFRAYKVSKRLDDDISAVCAAFNLRVENGVITD ARVAFGGMAAIPKRAAHCEAVLLGQPFNNAVVERACTALGEDFTPLSDFRASKEYRLLSAQNLLRKYFIELQTPHIETRV TAYV >Mature_484_residues MIQFLLNQELRSEHALDPNLTVLNYLREHVGKSGTKEGCASGDCGACTVVVGELQTDDDGREHIRYRSLNSCLTFVSSLH GKQLISVEDLKHKGELHSVQKAMVECHGSQCGFCTPGFVMSLFALQKNSDAPDQAKAHEALAGNLCRCTGYRPILAAAEQ SCCGKQPDQFDAREAETIARLKAIAPTSIGELNSGDKRCLVPLTVADLADLYDAYPQARLLAGGTDLALEVTQFHRTLPV MIYVGNVAEMKRIEHFDDRIEIGAATALSDCYEALNAEYPDFGELLHRFASLQIRNQGTLGGNIGNASPIGDSPPLLIAL GAQIVLCKGETRRTLALEDYFIDYRVTARQESEFIEKIIVPRATTEQRFRAYKVSKRLDDDISAVCAAFNLRVENGVITD ARVAFGGMAAIPKRAAHCEAVLLGQPFNNAVVERACTALGEDFTPLSDFRASKEYRLLSAQNLLRKYFIELQTPHIETRV TAYV
Specific function: Catalyzes reductive dehydroxylation of 4-hydroxybenzoyl- CoA. Reaction is not reversible [H]
COG id: COG4630
COG function: function code F; Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=490, Percent_Identity=31.0204081632653, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI71773480, Length=529, Percent_Identity=27.2211720226843, Blast_Score=152, Evalue=9e-37, Organism=Escherichia coli, GI1789231, Length=271, Percent_Identity=28.7822878228782, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1786480, Length=161, Percent_Identity=34.7826086956522, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1789232, Length=140, Percent_Identity=38.5714285714286, Blast_Score=86, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17540638, Length=541, Percent_Identity=30.1293900184843, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI32566215, Length=169, Percent_Identity=43.1952662721894, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17539860, Length=156, Percent_Identity=44.2307692307692, Blast_Score=138, Evalue=7e-33, Organism=Drosophila melanogaster, GI17737937, Length=492, Percent_Identity=34.349593495935, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI24647199, Length=495, Percent_Identity=28.4848484848485, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI24647201, Length=489, Percent_Identity=26.3803680981595, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24647197, Length=491, Percent_Identity=27.0875763747454, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI24647193, Length=498, Percent_Identity=27.3092369477912, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24647195, Length=314, Percent_Identity=29.6178343949045, Blast_Score=124, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR017606 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.20 [H]
Molecular weight: Translated: 53132; Mature: 53132
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQFLLNQELRSEHALDPNLTVLNYLREHVGKSGTKEGCASGDCGACTVVVGELQTDDDG CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCH REHIRYRSLNSCLTFVSSLHGKQLISVEDLKHKGELHSVQKAMVECHGSQCGFCTPGFVM HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHH SLFALQKNSDAPDQAKAHEALAGNLCRCTGYRPILAAAEQSCCGKQPDQFDAREAETIAR HHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH LKAIAPTSIGELNSGDKRCLVPLTVADLADLYDAYPQARLLAGGTDLALEVTQFHRTLPV HHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCEEEECCCCCEEEHHHHHCCCEE MIYVGNVAEMKRIEHFDDRIEIGAATALSDCYEALNAEYPDFGELLHRFASLQIRNQGTL EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCC GGNIGNASPIGDSPPLLIALGAQIVLCKGETRRTLALEDYFIDYRVTARQESEFIEKIIV CCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCEEEEEEEEEEEEEECHHHHHHHHHHHC PRATTEQRFRAYKVSKRLDDDISAVCAAFNLRVENGVITDARVAFGGMAAIPKRAAHCEA CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCEECHHHHHCCHHHCCHHHHCCCE VLLGQPFNNAVVERACTALGEDFTPLSDFRASKEYRLLSAQNLLRKYFIELQTPHIETRV EEECCCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE TAYV EEEC >Mature Secondary Structure MIQFLLNQELRSEHALDPNLTVLNYLREHVGKSGTKEGCASGDCGACTVVVGELQTDDDG CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCH REHIRYRSLNSCLTFVSSLHGKQLISVEDLKHKGELHSVQKAMVECHGSQCGFCTPGFVM HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHH SLFALQKNSDAPDQAKAHEALAGNLCRCTGYRPILAAAEQSCCGKQPDQFDAREAETIAR HHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH LKAIAPTSIGELNSGDKRCLVPLTVADLADLYDAYPQARLLAGGTDLALEVTQFHRTLPV HHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCEEEECCCCCEEEHHHHHCCCEE MIYVGNVAEMKRIEHFDDRIEIGAATALSDCYEALNAEYPDFGELLHRFASLQIRNQGTL EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCC GGNIGNASPIGDSPPLLIALGAQIVLCKGETRRTLALEDYFIDYRVTARQESEFIEKIIV CCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCEEEEEEEEEEEEEECHHHHHHHHHHHC PRATTEQRFRAYKVSKRLDDDISAVCAAFNLRVENGVITDARVAFGGMAAIPKRAAHCEA CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCEECHHHHHCCHHHCCHHHHCCCE VLLGQPFNNAVVERACTALGEDFTPLSDFRASKEYRLLSAQNLLRKYFIELQTPHIETRV EEECCCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE TAYV EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9490068 [H]