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The map label for this gene is uxuR [H]

Identifier: 77458020

GI number: 77458020

Start: 1997974

End: 1998738

Strand: Direct

Name: uxuR [H]

Synonym: Pfl01_1793

Alternate gene names: 77458020

Gene position: 1997974-1998738 (Clockwise)

Preceding gene: 77458018

Following gene: 77458025

Centisome position: 31.03

GC content: 61.96

Gene sequence:

>765_bases
ATGAACGAACAGTTGCAACCCCTCAAGAAACAACCGCGAGCAGGCAAAGCCGGCCGCAGCGGAACCCAGGACGATATTGT
CTATGCGCATATCTTCGAGGCCATCCTCGAACAACGCCTGGCGCCCGGCACCAAGTTGAGCGAAGAAGCGCTGGGGGAAA
TTTTCGGGGTCAGCCGCACCATCATTCGCCGCGCGCTCTCGCGTCTGGCCCATGAAGGCGTGGTGCTGTTGCGGCCGAAC
CGTGGCGCGGTCGTCGCCAGCCCGAGCGTTGAAGAGGCGCGTCAGGTGTTCCTCGCCCGACGTCTGGTGGAACGCGCGAT
CACCGAGCTGGCGGTGCAACACGCCACCGCCGAGCAGATCGCCGAACTGCGCCAGATGGTCAACGACGAGCGCGACAGCT
TCTCCCGTGGCGATCGCGGTGCCGGCATCCGTCTCTCGGGTGAATTCCACCTGAAACTGGCCGAAGCGGCGAAGAACGCG
CCGTTGATCAGCTTCCAGCGCAGCCTGGTTTCGCAGACGTCGCTGATCATCGCCCAATATGAAAGCGGCAACCGCTCGCA
CTGTTCCTACGATGAGCACACCCAGTTGATCGACGCCATCGAAGCGCGCAACGGTGAGCTGGCGGTGGACCTGATGATGC
ATCACATGGATCACATCGACAGCAAGCTCAACCTCGACGAGGAAAGTGCTTCGGACGATCTGCATGCAGTGTTCTCGCAC
CTGTTGCAGACCAAGAAACCGGGGCGGCCGGCGGTCAAGCTCTGA

Upstream 100 bases:

>100_bases
GTACAATCGCGCTGTTTTTTACGCGATACTTGCCAGCGACCTACTGTGCCGTATTACAGTCACGGTCAATTCGCCGCCGT
TCTTCCCGACTCGAGTGCCC

Downstream 100 bases:

>100_bases
AGCGAATCGACAGGCAATAAAAATCCCCCGGACTGCAAAGTACCGGGGGATTTTTTTTGTCTGCGGAAAACTAGCGCTGG
TGCACCAGCGCACCCGCCGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNEQLQPLKKQPRAGKAGRSGTQDDIVYAHIFEAILEQRLAPGTKLSEEALGEIFGVSRTIIRRALSRLAHEGVVLLRPN
RGAVVASPSVEEARQVFLARRLVERAITELAVQHATAEQIAELRQMVNDERDSFSRGDRGAGIRLSGEFHLKLAEAAKNA
PLISFQRSLVSQTSLIIAQYESGNRSHCSYDEHTQLIDAIEARNGELAVDLMMHHMDHIDSKLNLDEESASDDLHAVFSH
LLQTKKPGRPAVKL

Sequences:

>Translated_254_residues
MNEQLQPLKKQPRAGKAGRSGTQDDIVYAHIFEAILEQRLAPGTKLSEEALGEIFGVSRTIIRRALSRLAHEGVVLLRPN
RGAVVASPSVEEARQVFLARRLVERAITELAVQHATAEQIAELRQMVNDERDSFSRGDRGAGIRLSGEFHLKLAEAAKNA
PLISFQRSLVSQTSLIIAQYESGNRSHCSYDEHTQLIDAIEARNGELAVDLMMHHMDHIDSKLNLDEESASDDLHAVFSH
LLQTKKPGRPAVKL
>Mature_254_residues
MNEQLQPLKKQPRAGKAGRSGTQDDIVYAHIFEAILEQRLAPGTKLSEEALGEIFGVSRTIIRRALSRLAHEGVVLLRPN
RGAVVASPSVEEARQVFLARRLVERAITELAVQHATAEQIAELRQMVNDERDSFSRGDRGAGIRLSGEFHLKLAEAAKNA
PLISFQRSLVSQTSLIIAQYESGNRSHCSYDEHTQLIDAIEARNGELAVDLMMHHMDHIDSKLNLDEESASDDLHAVFSH
LLQTKKPGRPAVKL

Specific function: Repressor for the uxuRBA operon [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=211, Percent_Identity=24.6445497630332, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 28163; Mature: 28163

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEQLQPLKKQPRAGKAGRSGTQDDIVYAHIFEAILEQRLAPGTKLSEEALGEIFGVSRT
CCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IIRRALSRLAHEGVVLLRPNRGAVVASPSVEEARQVFLARRLVERAITELAVQHATAEQI
HHHHHHHHHHHCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AELRQMVNDERDSFSRGDRGAGIRLSGEFHLKLAEAAKNAPLISFQRSLVSQTSLIIAQY
HHHHHHHCCHHHHHCCCCCCCCEEECCHHEEEHHHHHCCCCHHHHHHHHHHHHHHEEEEE
ESGNRSHCSYDEHTQLIDAIEARNGELAVDLMMHHMDHIDSKLNLDEESASDDLHAVFSH
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHH
LLQTKKPGRPAVKL
HHHCCCCCCCCCCC
>Mature Secondary Structure
MNEQLQPLKKQPRAGKAGRSGTQDDIVYAHIFEAILEQRLAPGTKLSEEALGEIFGVSRT
CCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IIRRALSRLAHEGVVLLRPNRGAVVASPSVEEARQVFLARRLVERAITELAVQHATAEQI
HHHHHHHHHHHCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AELRQMVNDERDSFSRGDRGAGIRLSGEFHLKLAEAAKNAPLISFQRSLVSQTSLIIAQY
HHHHHHHCCHHHHHCCCCCCCCEEECCHHEEEHHHHHCCCCHHHHHHHHHHHHHHEEEEE
ESGNRSHCSYDEHTQLIDAIEARNGELAVDLMMHHMDHIDSKLNLDEESASDDLHAVFSH
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHH
LLQTKKPGRPAVKL
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]