| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pucI [H]
Identifier: 77457983
GI number: 77457983
Start: 1949913
End: 1951457
Strand: Reverse
Name: pucI [H]
Synonym: Pfl01_1756
Alternate gene names: 77457983
Gene position: 1951457-1949913 (Counterclockwise)
Preceding gene: 77457984
Following gene: 77457982
Centisome position: 30.31
GC content: 61.36
Gene sequence:
>1545_bases ATGCGTACGAGTCTCTCCAATAACAACATCGCGCTGAATCTGCCCGCCTCTTCACCCCTCGACCACAGCGTGCCCGGTGA TGGCATCGCCGAACCACTGCAACTGAGCCCGCGTCTGCACAACAGCGACCTCGCGCCGACCAAGGTCGAAGGACGGCGCT GGGGCAAATACAGCATCTTTGCCCTGTGGACCAACGATGTGCACAACATCGCCAACTACTCGTTTGCCATCGGTCTGTAC GCCTTGGGCCTGGGCGGCTGGCAGATTCTGCTGTCGCTGGGGATCGGCGCGGCGCTGGTGTACTTCTTCATGAACCTGTC CGGCTACATGGGGCAGAAAACCGGGGTGCCGTTTCCGGTGATCAGCCGGATCAGTTTCGGCATTCACGGGGCACAGATTC CTGCATTGATCCGGGCGGTGATCGCCATCGCCTGGTTCGGGATTCAGACGTACCTGGCGTCGGTGGTGTTTCGCGTGTTG CTCACGGCAATCCATCCCGGTTTCGCCGACTACGACCACAACTCGATCCTCGGCCTGTCGAGCCTGGGCTGGGTGTGTTT CGTGGCGATCTGGTTTGTGCAGTTGGGGATTCTGGCGTATGGCATGGAAATGGTCCGCCGCTACGAAGCCTTCGCCGGGC CGGTGATTCTGCTGACCGTCGCCTGCCTCGCCGCGTGGATGTACACCCAGGCCAACGCTACCATTGCCTGGTCGATTCGC GAGCCGCTGACCGGCGCCGAGATGTGGCGCAACATCTTTGCCGGCGGCGCCTTGTGGCTGGCGATCTACGGCACGCTGAT CCTCAACTTTTGCGATTTCGCTCGCTCTTCACCGTGCCGCAAAACCATCAAGGTCGGAAATTTCTGGGGCCTGCCGGTCA ATATTCTGGTGTTCGCCGGGATCACCGTCCTGCTGTGCGGTGCGCAATTTCACATCAACGGGCGGATCATCGAAAGCCCG ACCGAAATCATTGCGTCGATCCCCAACACGTTCTTTCTGGTACTCGGATGCCTGGCGTTCCTGATCGTCACCGTGGCGGT GAACATTATGGCCAACTTCGTCGCCCCGGCCTTCGTGCTGAGCAACCTGGCGCCTAAATACCTGACCTTCCGCCGCGCCG GGCTGATCAGCGCAACGATTGCCGTACTGATCCTGCCGTGGAACCTCTACAACAGCCCGCTGGTGATCGTGTACTTCCTG TCCGGCCTCGGCGCCCTGCTCGGCCCGTTGTACGGCGTGATCATGGTCGACTACTGGCTGATCCGCAAAGGCCGGATCCA CGTGCCGCAGCTGTACAGCGAACACCCGAACGGTGCGTATTACTACAGTCGCGGGGTCAATCTGCGGGCGGTCGCAGCGT TTATTCCGGCCGCCTTGATCGCGATCGTCCTGGCGCTGGTGCCGGGCTTCCACAGCGTTTCGCCCTTCTCCTGGCTGATC GGCGCCGGCATTGCCGGGATGCTCTACCTGATCATCGCCAAACGCCAGCCGCACTACGCCGACGTCGACGGTGAAGCCAT CGCCGTCGACAACGTCAGCCACTGA
Upstream 100 bases:
>100_bases GCCCCGTAACCAGTGATGTTTTCACCGCCGCGACGAAGATCTGCCGAGCCCGAACGCTCATGCACAGTCATCGCGGCCCG AACATCAGGAGCCTGCCGGA
Downstream 100 bases:
>100_bases ATTTTTTGGCGGCCCTTTCCGGAGCCGCAGAACCAACCGCAATAAGGACTTCCCATGCGCATTCTCGTGGTCAACGTCAA CACCACCGAATCCATCACCC
Product: cytosine/purines, uracil, thiamine, allantoin permease
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MRTSLSNNNIALNLPASSPLDHSVPGDGIAEPLQLSPRLHNSDLAPTKVEGRRWGKYSIFALWTNDVHNIANYSFAIGLY ALGLGGWQILLSLGIGAALVYFFMNLSGYMGQKTGVPFPVISRISFGIHGAQIPALIRAVIAIAWFGIQTYLASVVFRVL LTAIHPGFADYDHNSILGLSSLGWVCFVAIWFVQLGILAYGMEMVRRYEAFAGPVILLTVACLAAWMYTQANATIAWSIR EPLTGAEMWRNIFAGGALWLAIYGTLILNFCDFARSSPCRKTIKVGNFWGLPVNILVFAGITVLLCGAQFHINGRIIESP TEIIASIPNTFFLVLGCLAFLIVTVAVNIMANFVAPAFVLSNLAPKYLTFRRAGLISATIAVLILPWNLYNSPLVIVYFL SGLGALLGPLYGVIMVDYWLIRKGRIHVPQLYSEHPNGAYYYSRGVNLRAVAAFIPAALIAIVLALVPGFHSVSPFSWLI GAGIAGMLYLIIAKRQPHYADVDGEAIAVDNVSH
Sequences:
>Translated_514_residues MRTSLSNNNIALNLPASSPLDHSVPGDGIAEPLQLSPRLHNSDLAPTKVEGRRWGKYSIFALWTNDVHNIANYSFAIGLY ALGLGGWQILLSLGIGAALVYFFMNLSGYMGQKTGVPFPVISRISFGIHGAQIPALIRAVIAIAWFGIQTYLASVVFRVL LTAIHPGFADYDHNSILGLSSLGWVCFVAIWFVQLGILAYGMEMVRRYEAFAGPVILLTVACLAAWMYTQANATIAWSIR EPLTGAEMWRNIFAGGALWLAIYGTLILNFCDFARSSPCRKTIKVGNFWGLPVNILVFAGITVLLCGAQFHINGRIIESP TEIIASIPNTFFLVLGCLAFLIVTVAVNIMANFVAPAFVLSNLAPKYLTFRRAGLISATIAVLILPWNLYNSPLVIVYFL SGLGALLGPLYGVIMVDYWLIRKGRIHVPQLYSEHPNGAYYYSRGVNLRAVAAFIPAALIAIVLALVPGFHSVSPFSWLI GAGIAGMLYLIIAKRQPHYADVDGEAIAVDNVSH >Mature_514_residues MRTSLSNNNIALNLPASSPLDHSVPGDGIAEPLQLSPRLHNSDLAPTKVEGRRWGKYSIFALWTNDVHNIANYSFAIGLY ALGLGGWQILLSLGIGAALVYFFMNLSGYMGQKTGVPFPVISRISFGIHGAQIPALIRAVIAIAWFGIQTYLASVVFRVL LTAIHPGFADYDHNSILGLSSLGWVCFVAIWFVQLGILAYGMEMVRRYEAFAGPVILLTVACLAAWMYTQANATIAWSIR EPLTGAEMWRNIFAGGALWLAIYGTLILNFCDFARSSPCRKTIKVGNFWGLPVNILVFAGITVLLCGAQFHINGRIIESP TEIIASIPNTFFLVLGCLAFLIVTVAVNIMANFVAPAFVLSNLAPKYLTFRRAGLISATIAVLILPWNLYNSPLVIVYFL SGLGALLGPLYGVIMVDYWLIRKGRIHVPQLYSEHPNGAYYYSRGVNLRAVAAFIPAALIAIVLALVPGFHSVSPFSWLI GAGIAGMLYLIIAKRQPHYADVDGEAIAVDNVSH
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=486, Percent_Identity=30.4526748971193, Blast_Score=195, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6319495, Length=469, Percent_Identity=26.0127931769723, Blast_Score=147, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6319429, Length=517, Percent_Identity=25.531914893617, Blast_Score=143, Evalue=6e-35, Organism=Saccharomyces cerevisiae, GI6322219, Length=439, Percent_Identity=25.7403189066059, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324645, Length=434, Percent_Identity=23.2718894009217, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324766, Length=440, Percent_Identity=23.6363636363636, Blast_Score=90, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6323266, Length=118, Percent_Identity=31.3559322033898, Blast_Score=73, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 55949; Mature: 55949
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSLSNNNIALNLPASSPLDHSVPGDGIAEPLQLSPRLHNSDLAPTKVEGRRWGKYSIF CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEE ALWTNDVHNIANYSFAIGLYALGLGGWQILLSLGIGAALVYFFMNLSGYMGQKTGVPFPV EEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH ISRISFGIHGAQIPALIRAVIAIAWFGIQTYLASVVFRVLLTAIHPGFADYDHNSILGLS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHH SLGWVCFVAIWFVQLGILAYGMEMVRRYEAFAGPVILLTVACLAAWMYTQANATIAWSIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEECC EPLTGAEMWRNIFAGGALWLAIYGTLILNFCDFARSSPCRKTIKVGNFWGLPVNILVFAG CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHH ITVLLCGAQFHINGRIIESPTEIIASIPNTFFLVLGCLAFLIVTVAVNIMANFVAPAFVL HHHHHCCCEEEECCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNLAPKYLTFRRAGLISATIAVLILPWNLYNSPLVIVYFLSGLGALLGPLYGVIMVDYWL HHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IRKGRIHVPQLYSEHPNGAYYYSRGVNLRAVAAFIPAALIAIVLALVPGFHSVSPFSWLI HHCCCCCCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH GAGIAGMLYLIIAKRQPHYADVDGEAIAVDNVSH HHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC >Mature Secondary Structure MRTSLSNNNIALNLPASSPLDHSVPGDGIAEPLQLSPRLHNSDLAPTKVEGRRWGKYSIF CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEE ALWTNDVHNIANYSFAIGLYALGLGGWQILLSLGIGAALVYFFMNLSGYMGQKTGVPFPV EEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH ISRISFGIHGAQIPALIRAVIAIAWFGIQTYLASVVFRVLLTAIHPGFADYDHNSILGLS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHH SLGWVCFVAIWFVQLGILAYGMEMVRRYEAFAGPVILLTVACLAAWMYTQANATIAWSIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEECC EPLTGAEMWRNIFAGGALWLAIYGTLILNFCDFARSSPCRKTIKVGNFWGLPVNILVFAG CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHH ITVLLCGAQFHINGRIIESPTEIIASIPNTFFLVLGCLAFLIVTVAVNIMANFVAPAFVL HHHHHCCCEEEECCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNLAPKYLTFRRAGLISATIAVLILPWNLYNSPLVIVYFLSGLGALLGPLYGVIMVDYWL HHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IRKGRIHVPQLYSEHPNGAYYYSRGVNLRAVAAFIPAALIAIVLALVPGFHSVSPFSWLI HHCCCCCCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH GAGIAGMLYLIIAKRQPHYADVDGEAIAVDNVSH HHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]