| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is hyuE [H]
Identifier: 77457982
GI number: 77457982
Start: 1949130
End: 1949858
Strand: Reverse
Name: hyuE [H]
Synonym: Pfl01_1755
Alternate gene names: 77457982
Gene position: 1949858-1949130 (Counterclockwise)
Preceding gene: 77457983
Following gene: 77457980
Centisome position: 30.28
GC content: 63.79
Gene sequence:
>729_bases ATGCGCATTCTCGTGGTCAACGTCAACACCACCGAATCCATCACCCAGGCCATCGCCCGCTCGGCGCAGGCTGTCGCCTC CCCCGGCACGGAAATCGTCGGCCTGACGCCGCATTTCGGCGCCGATTCAGTCGAAGGCAATTTCGAAAGTTATCTGGCCG CCATCGCCGTGATGGACCGGGTGATGTCCTACGACCAGCCGTTCGACGCGGTGATCCAGGCCGGCTACGGCGAACACGGT CGCGAAGGCTTGCAGGAATTGCTCAACGTGCCGGTGGTGGACATCACCGATGCGGCGGCCAGTACCGCGATGTTTCTCGG CCACGCCTATTCGGTGGTCACTACGCTGGATCGCACCGTGCCGTTGATCGAGGATCGGCTGAAACTCTCCGGCCTGTGGG ATCGCTGCGCCTCGGTGCGCGCCAGTGGTCTTGCGGTTCTGGAGCTGGAGCACGAACCGCAACGGGCGCTGGAAGCGATC GTGCATCAGGCGGAACTGGCGGTGACTCAGGATAAAGCCGAAGTGATCTGCCTCGGTTGCGGCGGCATGGCCGGGCTCGA CGAGAAGATTCGTCAGCGCACCGGGGTGCCGGTGATCGATGGCGTCACAGCGGCCGTGACCATTGCCGAATCGCTGGTGC GCCTCGGCCTGTCGACCTCCAAGGTGCGCACCTATGCGACGCCACGGCCGAAAACCATCATTGGCTGGCCAGCACGTTTT GCGCGTTGA
Upstream 100 bases:
>100_bases CGACGTCGACGGTGAAGCCATCGCCGTCGACAACGTCAGCCACTGAATTTTTTGGCGGCCCTTTCCGGAGCCGCAGAACC AACCGCAATAAGGACTTCCC
Downstream 100 bases:
>100_bases ACCGTTCGGCGAGGCCCAGGGTTGAAAACTGCTCGATGACAAAATCGACGAACGCCCGGGTCTTGCCCGGCAGCAGTTTG TGTTCGGCGTAATAAATGGA
Product: Asp/Glu racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MRILVVNVNTTESITQAIARSAQAVASPGTEIVGLTPHFGADSVEGNFESYLAAIAVMDRVMSYDQPFDAVIQAGYGEHG REGLQELLNVPVVDITDAAASTAMFLGHAYSVVTTLDRTVPLIEDRLKLSGLWDRCASVRASGLAVLELEHEPQRALEAI VHQAELAVTQDKAEVICLGCGGMAGLDEKIRQRTGVPVIDGVTAAVTIAESLVRLGLSTSKVRTYATPRPKTIIGWPARF AR
Sequences:
>Translated_242_residues MRILVVNVNTTESITQAIARSAQAVASPGTEIVGLTPHFGADSVEGNFESYLAAIAVMDRVMSYDQPFDAVIQAGYGEHG REGLQELLNVPVVDITDAAASTAMFLGHAYSVVTTLDRTVPLIEDRLKLSGLWDRCASVRASGLAVLELEHEPQRALEAI VHQAELAVTQDKAEVICLGCGGMAGLDEKIRQRTGVPVIDGVTAAVTIAESLVRLGLSTSKVRTYATPRPKTIIGWPARF AR >Mature_242_residues MRILVVNVNTTESITQAIARSAQAVASPGTEIVGLTPHFGADSVEGNFESYLAAIAVMDRVMSYDQPFDAVIQAGYGEHG REGLQELLNVPVVDITDAAASTAMFLGHAYSVVTTLDRTVPLIEDRLKLSGLWDRCASVRASGLAVLELEHEPQRALEAI VHQAELAVTQDKAEVICLGCGGMAGLDEKIRQRTGVPVIDGVTAAVTIAESLVRLGLSTSKVRTYATPRPKTIIGWPARF AR
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 25852; Mature: 25852
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILVVNVNTTESITQAIARSAQAVASPGTEIVGLTPHFGADSVEGNFESYLAAIAVMDR CEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH VMSYDQPFDAVIQAGYGEHGREGLQELLNVPVVDITDAAASTAMFLGHAYSVVTTLDRTV HHHCCCCHHHHHHCCCCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHH PLIEDRLKLSGLWDRCASVRASGLAVLELEHEPQRALEAIVHQAELAVTQDKAEVICLGC HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHEECCCCCEEEEEC GGMAGLDEKIRQRTGVPVIDGVTAAVTIAESLVRLGLSTSKVRTYATPRPKTIIGWPARF CCCCCHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCHHHHEEECCCCCCEEEECCHHH AR CC >Mature Secondary Structure MRILVVNVNTTESITQAIARSAQAVASPGTEIVGLTPHFGADSVEGNFESYLAAIAVMDR CEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH VMSYDQPFDAVIQAGYGEHGREGLQELLNVPVVDITDAAASTAMFLGHAYSVVTTLDRTV HHHCCCCHHHHHHCCCCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHH PLIEDRLKLSGLWDRCASVRASGLAVLELEHEPQRALEAIVHQAELAVTQDKAEVICLGC HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHEECCCCCEEEEEC GGMAGLDEKIRQRTGVPVIDGVTAAVTIAESLVRLGLSTSKVRTYATPRPKTIIGWPARF CCCCCHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCHHHHEEECCCCCCEEEECCHHH AR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]