| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fabG [H]
Identifier: 77457980
GI number: 77457980
Start: 1947348
End: 1948094
Strand: Reverse
Name: fabG [H]
Synonym: Pfl01_1753
Alternate gene names: 77457980
Gene position: 1948094-1947348 (Counterclockwise)
Preceding gene: 77457982
Following gene: 77457978
Centisome position: 30.26
GC content: 63.45
Gene sequence:
>747_bases ATGACCACTCAACACCTCAGCGGTAAAGTCGCTCTGATTCAAGGCGGCTCTCGCGGCATCGGTGCCGCCATCGTCAAACG CCTGGCCGCTGAAGGCGCCGCGGTTGCCTTTACCTACGTCAGCTCGGCCGCCAAGGCTGAAGAACTGCAAAACAGCATCA CCGCCACCGGCGGCAAAGCCCTGGCGATCAAGGCTGACAGCGCCGACGCCAGCGCCATCCGCAACGCGGTGAACGCCACT GTCGAAACCTTTGGCCGCCTCGACATTCTGGTCAACAACGCCGGTGTACTGGCCGTCGCCCCGCTGGAAGACTTCAAACT GGAAGACTTCGACCAGACCCTGGCAATCAACGTGCGCAGCGTGTTCATCGCCAGCCAGGAAGCCGCCAAACACATGGGCG AAGGCTCACGCATCATCAACATCGGCAGCACCAACGCCGACCGCATGCCCTTCGCCGGTGGTGGCGTGTATGCGATGAGC AAATCTGCACTGGTGGGCCTGACCAAAGGCCTGGCCCGCGACCTCGGCCCACGCGGCATCACCATCAACAACGTGCAGCC TGGCCCGGTCGACACCGACATGAACCCGGCCCACGGCGAGTTCGCCGACAGCCTGATTCCGCTGATGGCCGTCGGTCGTT ATGGCACGGCCGAGGAAATCGCCAGCTTCGTCACCTACCTCGCAAGCCCGGAGGCCGGTTATATCACCGGGGCCAGCCTG ACCATCGACGGTGGTTTCGGCGCCTGA
Upstream 100 bases:
>100_bases ACACAGACTATAGCAACCACGGTCTACCCGCCTATTGGCGAGGGGCAGATACTCGACACCACACCAAGGCAGCCTGCCTT GAAACTTCTGGAGATCGAAC
Downstream 100 bases:
>100_bases TTGATCGGATAGTCGATAACGAAAAACGCCGCCCCTCCTTTGACAGAGGGGCGGCGTTTTTTTTGTTCGCGATTTGATCA AGCCCAGTCGAGCGCCGGCA
Product: 3-ketoacyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTTQHLSGKVALIQGGSRGIGAAIVKRLAAEGAAVAFTYVSSAAKAEELQNSITATGGKALAIKADSADASAIRNAVNAT VETFGRLDILVNNAGVLAVAPLEDFKLEDFDQTLAINVRSVFIASQEAAKHMGEGSRIINIGSTNADRMPFAGGGVYAMS KSALVGLTKGLARDLGPRGITINNVQPGPVDTDMNPAHGEFADSLIPLMAVGRYGTAEEIASFVTYLASPEAGYITGASL TIDGGFGA
Sequences:
>Translated_248_residues MTTQHLSGKVALIQGGSRGIGAAIVKRLAAEGAAVAFTYVSSAAKAEELQNSITATGGKALAIKADSADASAIRNAVNAT VETFGRLDILVNNAGVLAVAPLEDFKLEDFDQTLAINVRSVFIASQEAAKHMGEGSRIINIGSTNADRMPFAGGGVYAMS KSALVGLTKGLARDLGPRGITINNVQPGPVDTDMNPAHGEFADSLIPLMAVGRYGTAEEIASFVTYLASPEAGYITGASL TIDGGFGA >Mature_247_residues TTQHLSGKVALIQGGSRGIGAAIVKRLAAEGAAVAFTYVSSAAKAEELQNSITATGGKALAIKADSADASAIRNAVNATV ETFGRLDILVNNAGVLAVAPLEDFKLEDFDQTLAINVRSVFIASQEAAKHMGEGSRIINIGSTNADRMPFAGGGVYAMSK SALVGLTKGLARDLGPRGITINNVQPGPVDTDMNPAHGEFADSLIPLMAVGRYGTAEEIASFVTYLASPEAGYITGASLT IDGGFGA
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=33.201581027668, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI32483357, Length=253, Percent_Identity=34.3873517786561, Blast_Score=108, Evalue=3e-24, Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=34.0163934426229, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI19923817, Length=254, Percent_Identity=31.496062992126, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=31.3253012048193, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI66933014, Length=253, Percent_Identity=32.0158102766798, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=30.5220883534137, Blast_Score=100, Evalue=9e-22, Organism=Homo sapiens, GI31542939, Length=202, Percent_Identity=36.6336633663366, Blast_Score=98, Evalue=6e-21, Organism=Homo sapiens, GI224922801, Length=188, Percent_Identity=35.6382978723404, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=31.9838056680162, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=28.4584980237154, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI4503301, Length=213, Percent_Identity=29.1079812206573, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4758504, Length=263, Percent_Identity=28.8973384030418, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI33667109, Length=197, Percent_Identity=32.48730964467, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI40254986, Length=195, Percent_Identity=28.7179487179487, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI83715985, Length=259, Percent_Identity=28.1853281853282, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI126723191, Length=191, Percent_Identity=34.0314136125654, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI166795268, Length=225, Percent_Identity=29.3333333333333, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI59889578, Length=239, Percent_Identity=28.0334728033473, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=52.6748971193416, Blast_Score=229, Evalue=2e-61, Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=38.7755102040816, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=33.8842975206612, Blast_Score=133, Evalue=9e-33, Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=37.5, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=32.9365079365079, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=30.8, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI87082160, Length=253, Percent_Identity=32.0158102766798, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=29.4820717131474, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1789057, Length=255, Percent_Identity=30.5882352941176, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=31.8548387096774, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=29.296875, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787820, Length=184, Percent_Identity=27.7173913043478, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788891, Length=223, Percent_Identity=28.6995515695067, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=35.4961832061069, Blast_Score=124, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=34, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17531453, Length=260, Percent_Identity=36.1538461538462, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=33.6, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI193204405, Length=259, Percent_Identity=36.2934362934363, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17560676, Length=262, Percent_Identity=33.969465648855, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=34.3511450381679, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=33.0769230769231, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI25147288, Length=250, Percent_Identity=33.2, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=32.3886639676113, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=31.6981132075472, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=31.1284046692607, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=33.7209302325581, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=29.6296296296296, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=32.5581395348837, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17560220, Length=259, Percent_Identity=35.1351351351351, Blast_Score=97, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17559104, Length=258, Percent_Identity=32.9457364341085, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=30.3643724696356, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17538480, Length=270, Percent_Identity=32.2222222222222, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17565030, Length=270, Percent_Identity=31.4814814814815, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17551412, Length=266, Percent_Identity=31.203007518797, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=30.6513409961686, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=30.5660377358491, Blast_Score=87, Evalue=5e-18, Organism=Caenorhabditis elegans, GI71982365, Length=198, Percent_Identity=28.2828282828283, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=30.2325581395349, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17536025, Length=255, Percent_Identity=29.0196078431373, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=28.3524904214559, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17536651, Length=256, Percent_Identity=28.90625, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17508651, Length=258, Percent_Identity=29.4573643410853, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17538182, Length=259, Percent_Identity=29.7297297297297, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17558628, Length=194, Percent_Identity=29.3814432989691, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17564282, Length=240, Percent_Identity=27.0833333333333, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17568967, Length=193, Percent_Identity=29.0155440414508, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17558006, Length=209, Percent_Identity=29.6650717703349, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71997099, Length=207, Percent_Identity=27.536231884058, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17508895, Length=252, Percent_Identity=25.3968253968254, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17555612, Length=212, Percent_Identity=29.2452830188679, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17561272, Length=255, Percent_Identity=28.2352941176471, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=252, Percent_Identity=27.3809523809524, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322226, Length=193, Percent_Identity=32.6424870466321, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=38.5542168674699, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=34.412955465587, Blast_Score=128, Evalue=4e-30, Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=34.2741935483871, Blast_Score=127, Evalue=6e-30, Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=33.4677419354839, Blast_Score=127, Evalue=8e-30, Organism=Drosophila melanogaster, GI21355319, Length=259, Percent_Identity=35.5212355212355, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI24644339, Length=257, Percent_Identity=31.9066147859922, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=29.7619047619048, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI24644337, Length=253, Percent_Identity=32.4110671936759, Blast_Score=100, Evalue=7e-22, Organism=Drosophila melanogaster, GI17737361, Length=255, Percent_Identity=31.3725490196078, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24641232, Length=241, Percent_Identity=30.7053941908714, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI21357673, Length=201, Percent_Identity=28.8557213930348, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24656154, Length=210, Percent_Identity=31.4285714285714, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI19922628, Length=210, Percent_Identity=31.4285714285714, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI116007236, Length=247, Percent_Identity=26.7206477732794, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 25343; Mature: 25212
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQHLSGKVALIQGGSRGIGAAIVKRLAAEGAAVAFTYVSSAAKAEELQNSITATGGKA CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCEE LAIKADSADASAIRNAVNATVETFGRLDILVNNAGVLAVAPLEDFKLEDFDQTLAINVRS EEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEEH VFIASQEAAKHMGEGSRIINIGSTNADRMPFAGGGVYAMSKSALVGLTKGLARDLGPRGI EEEECHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCE TINNVQPGPVDTDMNPAHGEFADSLIPLMAVGRYGTAEEIASFVTYLASPEAGYITGASL EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCEE TIDGGFGA EECCCCCC >Mature Secondary Structure TTQHLSGKVALIQGGSRGIGAAIVKRLAAEGAAVAFTYVSSAAKAEELQNSITATGGKA CCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCEE LAIKADSADASAIRNAVNATVETFGRLDILVNNAGVLAVAPLEDFKLEDFDQTLAINVRS EEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEEH VFIASQEAAKHMGEGSRIINIGSTNADRMPFAGGGVYAMSKSALVGLTKGLARDLGPRGI EEEECHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCE TINNVQPGPVDTDMNPAHGEFADSLIPLMAVGRYGTAEEIASFVTYLASPEAGYITGASL EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCEE TIDGGFGA EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]