| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457947
Identifier: 77457947
GI number: 77457947
Start: 1913598
End: 1914389
Strand: Reverse
Name: 77457947
Synonym: Pfl01_1720
Alternate gene names: NA
Gene position: 1914389-1913598 (Counterclockwise)
Preceding gene: 77457948
Following gene: 77457945
Centisome position: 29.73
GC content: 59.09
Gene sequence:
>792_bases ATGACCGATACCCAGACTTCACCCGACACCACCGCTGAAAAAGACGCACCGCCAGCGGTCGAGCTGCCATGGGCGGATGT CCACGTCGAGCACCACAAGATGCTCCGCCTGGCGCCGTTGCAGACCGACCGCAACACCGGCGGGCGGCCGCTGCGCTTCG TTGAATTCGGTTACGCCGAGCGCAACGGCAAAGAACACAGCCTGATGCGCATGGCGATCAAGTTGCCCGCTCAGCGAGTG CGCAAAGAGCAGAATCACCTGGACGTGTGGGTCGACCACACCACCAAGCGTGTGCATTTCGGCCCGGACAGCGGTTTGCA GATCGAACCGCTGAACCGTGGCATCGGCCGTTTCATGGCTGCCCAAGGCATCAACTGGGCAAAAAAACGCTGGCCCACCT ACACCGTCGACGGCATGGACTTGAACAACAAGGACGCGCTGAACGAAGACACTCGCTTGCGCCGCGATCACTTTCTGCGG GTGCATGGCTTTGATGTGGTTTACGCCGACGCCCAGCATTTGAAGGGCAGCGTCAAAGAAGTGAAGGTCGGCGACCTGCT GGGTGACTGGAACAGCGAAAAGCTGCAGATTGTCGAAATTCTCGAAGCTGCGCAGATGTTGCAGCAGGCCGAGCAGAATC TGGCCGAGCAGGAAGTGAAGCTGAAGAAGCAGGAAGACAAGGTCAGCAAGTTCAAGCGCGAAGACGCCGGGCTGCGTTTC ACTATTACCTGTCTGGTGGCGTTTGCGGTGTTTCAGGCCGGGTTGCTGATCTGGATTGCTACGCACCGCTAA
Upstream 100 bases:
>100_bases TAAGCGGTGTTTACCCTCTAGTCCTGGGAAAAACGGCCGATAAGCCTTTGTCGCCAGCGTACTGGCTGGCGGCAAGCAGC TTGGACAGGATCTCGCCGTT
Downstream 100 bases:
>100_bases GCCAATGATCGTTCCCACAGAGGTGGGAACGATCGGTCCAGGTCAGACGCGGGAAGCGAACAGTGCCTGATGGGCGCGAC ACTGTTCGGCGGTCAGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTDTQTSPDTTAEKDAPPAVELPWADVHVEHHKMLRLAPLQTDRNTGGRPLRFVEFGYAERNGKEHSLMRMAIKLPAQRV RKEQNHLDVWVDHTTKRVHFGPDSGLQIEPLNRGIGRFMAAQGINWAKKRWPTYTVDGMDLNNKDALNEDTRLRRDHFLR VHGFDVVYADAQHLKGSVKEVKVGDLLGDWNSEKLQIVEILEAAQMLQQAEQNLAEQEVKLKKQEDKVSKFKREDAGLRF TITCLVAFAVFQAGLLIWIATHR
Sequences:
>Translated_263_residues MTDTQTSPDTTAEKDAPPAVELPWADVHVEHHKMLRLAPLQTDRNTGGRPLRFVEFGYAERNGKEHSLMRMAIKLPAQRV RKEQNHLDVWVDHTTKRVHFGPDSGLQIEPLNRGIGRFMAAQGINWAKKRWPTYTVDGMDLNNKDALNEDTRLRRDHFLR VHGFDVVYADAQHLKGSVKEVKVGDLLGDWNSEKLQIVEILEAAQMLQQAEQNLAEQEVKLKKQEDKVSKFKREDAGLRF TITCLVAFAVFQAGLLIWIATHR >Mature_262_residues TDTQTSPDTTAEKDAPPAVELPWADVHVEHHKMLRLAPLQTDRNTGGRPLRFVEFGYAERNGKEHSLMRMAIKLPAQRVR KEQNHLDVWVDHTTKRVHFGPDSGLQIEPLNRGIGRFMAAQGINWAKKRWPTYTVDGMDLNNKDALNEDTRLRRDHFLRV HGFDVVYADAQHLKGSVKEVKVGDLLGDWNSEKLQIVEILEAAQMLQQAEQNLAEQEVKLKKQEDKVSKFKREDAGLRFT ITCLVAFAVFQAGLLIWIATHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30105; Mature: 29974
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTQTSPDTTAEKDAPPAVELPWADVHVEHHKMLRLAPLQTDRNTGGRPLRFVEFGYAE CCCCCCCCCCCCCCCCCCCEECCCCCEEHHHHHHEEEECCCCCCCCCCCCEEEEEECCHH RNGKEHSLMRMAIKLPAQRVRKEQNHLDVWVDHTTKRVHFGPDSGLQIEPLNRGIGRFMA CCCCHHHHHHHHHHCCHHHHHHHCCCEEEEEECCEEEEEECCCCCCEEEHHHHHHHHHHH AQGINWAKKRWPTYTVDGMDLNNKDALNEDTRLRRDHFLRVHGFDVVYADAQHLKGSVKE HCCCCHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHEEEEECCEEEEECHHHHCCCHHH VKVGDLLGDWNSEKLQIVEILEAAQMLQQAEQNLAEQEVKLKKQEDKVSKFKREDAGLRF EEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE TITCLVAFAVFQAGLLIWIATHR HHHHHHHHHHHHCCEEEEEEECC >Mature Secondary Structure TDTQTSPDTTAEKDAPPAVELPWADVHVEHHKMLRLAPLQTDRNTGGRPLRFVEFGYAE CCCCCCCCCCCCCCCCCCEECCCCCEEHHHHHHEEEECCCCCCCCCCCCEEEEEECCHH RNGKEHSLMRMAIKLPAQRVRKEQNHLDVWVDHTTKRVHFGPDSGLQIEPLNRGIGRFMA CCCCHHHHHHHHHHCCHHHHHHHCCCEEEEEECCEEEEEECCCCCCEEEHHHHHHHHHHH AQGINWAKKRWPTYTVDGMDLNNKDALNEDTRLRRDHFLRVHGFDVVYADAQHLKGSVKE HCCCCHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHEEEEECCEEEEECHHHHCCCHHH VKVGDLLGDWNSEKLQIVEILEAAQMLQQAEQNLAEQEVKLKKQEDKVSKFKREDAGLRF EEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE TITCLVAFAVFQAGLLIWIATHR HHHHHHHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA