| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457948
Identifier: 77457948
GI number: 77457948
Start: 1914487
End: 1915440
Strand: Reverse
Name: 77457948
Synonym: Pfl01_1721
Alternate gene names: NA
Gene position: 1915440-1914487 (Counterclockwise)
Preceding gene: 77457954
Following gene: 77457947
Centisome position: 29.75
GC content: 62.89
Gene sequence:
>954_bases ATGATGCTGCGAGTTTTGATCTTGAGCCTTTCCCTGTTTACCGGCTTCGTCCAGGCGACTGTCCTGCAACGACCGGTCAC GTTGACTACCGACAACGGCGAACTTTTCGGCTCGCTGTTGCTGCCCAAATCCGACAACCCCGTGCCGGTTGTCCTGATCC TTTCCGGCTCGGGTCCTACCGATCGTGACGGAAACAACCCCGACGGCGGACGCAATGACAGCCTCAAGCGCCTGGCCTGG GTGCTGGCCAAACACAACGTCGCCAGTGTGCGTTTCGACAAGCGCGGCGTGGCTGCCAGCCTGGCCGCCACCCCGGACGA GCGAAACCTGTCGGTGGAAGCCTACGTGGCGGACGCCGTGGCCTGGGGGCAGAAGCTGAAAGCCGATCCGCGCTTCGGCC CGTTGATCCTGCTCGGCCACAGCGAAGGCGCGCTGATTGCCAGCCTGGCCGCTCCAAAGGTCGACGCGGCGGCGGTCATT TCGCTTTCCGGCACGGCCCGGCCGATCGATCAGGTGCTGCGCCGGCAACTGGCCCGCAGCCTCCCTCCCCCGTTGATGCT GCGCAGCAACGAACTGCTCGACAGCCTCAAGGCCGGGCATACCGACGACAATGTGCCAGCCCCGTTGCAGGTGATTTTCC GTCCGAGTGTGCAGCCGTACCTGATTTCGCTGTTCCGTCAGGATCCGGCGGCGGCCTTCGCCCAGCTGAAAATGCCGGCG CTGATCGTGCAAGGCAGCAACGACATTCAGGTCCAGGTCGATGATGCGAAATTGCTCAAGGCCGCCAAACCGGACGCAGA GCTGGCGCTGATCGAGGGTATGAACCACGTGTTGCGCATCGTGCCCAACGACGTGAAGCGGCAACTGGCCTCCTACAAGG ACCCGAATTTGCCGCTGGCGGCGGAACTGGGGACACGCGTTCTTGAATTTATTGACGGACTTCGCACCCGTTAA
Upstream 100 bases:
>100_bases TCGTGATGCGCGCCAGTATACGCAGGCTAACCGAGTAGTTCATCCTCGAACCTTAGCGGTGCGGGTGAGTCCAACCGGCA TCTTGGCAAATGATGGCGTG
Downstream 100 bases:
>100_bases GCGGTGTTTACCCTCTAGTCCTGGGAAAAACGGCCGATAAGCCTTTGTCGCCAGCGTACTGGCTGGCGGCAAGCAGCTTG GACAGGATCTCGCCGTTATG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase; Hydrolase; Secreted Protein; Protein Containing Alpha/Beta Hydrolase Fold; Signal Peptide; Hydrolase Alpha/Beta Fold Family; Lysophospholipase-Like Protein; Peptidase S; Lipoprotein
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MMLRVLILSLSLFTGFVQATVLQRPVTLTTDNGELFGSLLLPKSDNPVPVVLILSGSGPTDRDGNNPDGGRNDSLKRLAW VLAKHNVASVRFDKRGVAASLAATPDERNLSVEAYVADAVAWGQKLKADPRFGPLILLGHSEGALIASLAAPKVDAAAVI SLSGTARPIDQVLRRQLARSLPPPLMLRSNELLDSLKAGHTDDNVPAPLQVIFRPSVQPYLISLFRQDPAAAFAQLKMPA LIVQGSNDIQVQVDDAKLLKAAKPDAELALIEGMNHVLRIVPNDVKRQLASYKDPNLPLAAELGTRVLEFIDGLRTR
Sequences:
>Translated_317_residues MMLRVLILSLSLFTGFVQATVLQRPVTLTTDNGELFGSLLLPKSDNPVPVVLILSGSGPTDRDGNNPDGGRNDSLKRLAW VLAKHNVASVRFDKRGVAASLAATPDERNLSVEAYVADAVAWGQKLKADPRFGPLILLGHSEGALIASLAAPKVDAAAVI SLSGTARPIDQVLRRQLARSLPPPLMLRSNELLDSLKAGHTDDNVPAPLQVIFRPSVQPYLISLFRQDPAAAFAQLKMPA LIVQGSNDIQVQVDDAKLLKAAKPDAELALIEGMNHVLRIVPNDVKRQLASYKDPNLPLAAELGTRVLEFIDGLRTR >Mature_317_residues MMLRVLILSLSLFTGFVQATVLQRPVTLTTDNGELFGSLLLPKSDNPVPVVLILSGSGPTDRDGNNPDGGRNDSLKRLAW VLAKHNVASVRFDKRGVAASLAATPDERNLSVEAYVADAVAWGQKLKADPRFGPLILLGHSEGALIASLAAPKVDAAAVI SLSGTARPIDQVLRRQLARSLPPPLMLRSNELLDSLKAGHTDDNVPAPLQVIFRPSVQPYLISLFRQDPAAAFAQLKMPA LIVQGSNDIQVQVDDAKLLKAAKPDAELALIEGMNHVLRIVPNDVKRQLASYKDPNLPLAAELGTRVLEFIDGLRTR
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34120; Mature: 34120
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLRVLILSLSLFTGFVQATVLQRPVTLTTDNGELFGSLLLPKSDNPVPVVLILSGSGPT CHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCEEEEEEEECCCCC DRDGNNPDGGRNDSLKRLAWVLAKHNVASVRFDKRGVAASLAATPDERNLSVEAYVADAV CCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCEEEEEHHHHH AWGQKLKADPRFGPLILLGHSEGALIASLAAPKVDAAAVISLSGTARPIDQVLRRQLARS HHHHHHCCCCCCCCEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH LPPPLMLRSNELLDSLKAGHTDDNVPAPLQVIFRPSVQPYLISLFRQDPAAAFAQLKMPA CCCCEEECCHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHCCCE LIVQGSNDIQVQVDDAKLLKAAKPDAELALIEGMNHVLRIVPNDVKRQLASYKDPNLPLA EEEECCCCEEEEECHHHHHHHCCCCCHHHHHHHHHHHEEECCHHHHHHHHHCCCCCCCCH AELGTRVLEFIDGLRTR HHHHHHHHHHHHHHCCC >Mature Secondary Structure MMLRVLILSLSLFTGFVQATVLQRPVTLTTDNGELFGSLLLPKSDNPVPVVLILSGSGPT CHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCEEEEEEEECCCCC DRDGNNPDGGRNDSLKRLAWVLAKHNVASVRFDKRGVAASLAATPDERNLSVEAYVADAV CCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCEEEEEHHHHH AWGQKLKADPRFGPLILLGHSEGALIASLAAPKVDAAAVISLSGTARPIDQVLRRQLARS HHHHHHCCCCCCCCEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH LPPPLMLRSNELLDSLKAGHTDDNVPAPLQVIFRPSVQPYLISLFRQDPAAAFAQLKMPA CCCCEEECCHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHCCCE LIVQGSNDIQVQVDDAKLLKAAKPDAELALIEGMNHVLRIVPNDVKRQLASYKDPNLPLA EEEECCCCEEEEECHHHHHHHCCCCCHHHHHHHHHHHEEECCHHHHHHHHHCCCCCCCCH AELGTRVLEFIDGLRTR HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA