| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457936
Identifier: 77457936
GI number: 77457936
Start: 1903853
End: 1905478
Strand: Reverse
Name: 77457936
Synonym: Pfl01_1709
Alternate gene names: NA
Gene position: 1905478-1903853 (Counterclockwise)
Preceding gene: 77457937
Following gene: 77457933
Centisome position: 29.6
GC content: 60.33
Gene sequence:
>1626_bases ATGAGCCCGAAGAAACCGATCCGCCCCAGAACCCCGCCCACTTCAGATCAAGGCATCCCGAGGGCCCGCGATACGTCGCC TGAAATCACCGTCAGGCAAGCGGCTCACATCGAACAGCCGCCCCTCGATCAGACGACCGATCCGCTCACCGGCCCCGGCA ATCTGCCGTCCGGCTCCTCGCCTGCGCACTATCAGATCGCCGATCTGCCCCTCGGCACCCCTATCGCTCGCGTCACAAAC GATCGCCCGATTGCCGGTTACTTTCTTCCACCGCGCCTGGTGGACAGATTACCCCAGCCCGACTCACTGACAGGATTTCG CAAGGCCGGGCCGTATACCTACGTCGACCTGATCGACGGCGGAACGGTTTTGCTCGGCGCGGATTTACAAAGCAATATCA GAGCCCGAATGTCGAACGAACTCTGGGCTTCCGGCCCCCGACTCGAGCAGGTGGCAGGCACCCTGCAATGGCGCACGGTG GCCTCGAACGGTTCATCGACCATCGACGCTTCGCAACTTTTTATCACCCGCGTTCCCGCACCCGCTGACGAAGCGCACGC TACACCACCCAAACGTCCTCGTATTGCGGGTGATGAACAGCAACCGACTGACCCCTCCAGCGCGAACCGCGCGATTGCCG ACGCAGAGCTGGATGCGCTGATCGATCCCTGGAAGACCTGGGGCATCATCGGCCAACCGGGCTCACCTGACGACATCAAT ATCAACGGATCCCGATACCGGACCCTGCCCCGTGGTCCCGCACACAACGATCCAATTGTTTACATCAAGCATCCGTATCA CCTGATGTACGACTACGCCACGCTGGATCGGACACTGCGCACCGACTTCCTGCAGCAACCTCGCGGCGCCATTCGTGTTC CGCCTGCCCTGCATTGGGAAGTCGATCCGGCCCTGCCATTTCAGCGGCCGATGAAAGAAACCGTCGCCACCTATTTCCCC GAGTTGTCGGACGTCACCCTGCACAATGTCGCCAAACGGCAATTCACACTCGCCAATGGCTCCGAGCTTGCAACGGGCAG CGGTCTGACGCTGTTGCGTCAAGCGTTCAATGACTGGAAAACCGGCACCGTCAACCCGCGTCCGGAGTTGGTCGATCCGT TGTTGATGCTTGATTCACTGCCGCGATCCATAACGGAAGGCAACCAGAAGGTCGAGCTGCCCGTTGCCAACGTGAAAGCC GGTCTGCGTCGCCTGGACTTCGATCCGGCCCGGTTTCCAGAGGAATGGAGATACTTCATGCCGAGCCAGTCGGCGGTCGA TATAAAACGCTTTGCGGCGGGGCTTCTGACGCGCAACGGCTACAGCGTTTTCGAACCGAGCCCTGCACAAAGCTTTGCGG CCGTTGTGTTCACACGGACAGGGCATGACTTCGTCTTTTTCCTCAGCCTGCATCGCGTCAGGGGACGCCAGATTCAGCAG CCTGCTAATCAGGATCCGAATGCCGCGAATATCAGGCTGATCGATCAGGTCGGTCCGGACGCCGCGCAAGCCGTGGAAGC GGCTCACCCGGCGAACAAGGTCGTCTGGCTCAGAGGGGGCGTGCAGACGCTCGCCCCTTATCCGGATACGTTTTTCATCA TCAGGGATGATTACGCAAGGCTTTGA
Upstream 100 bases:
>100_bases CAACTGTGTCACCCGATAGACATATGTACCGCACGGCAACGTGCAGGCTTGAGGATCATTGAACGCTCCCGTCATCTGGA CCCCGTGAGCACAACAATCC
Downstream 100 bases:
>100_bases TGCCTCACAGACGCGAGGATAAAAAAAGCCCGCAGTGTGAGCGGGCGAAAGACCAAAGAAGCTATATGCGCAGTCGCTTC CCGGCAGGGGCAGCTGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MSPKKPIRPRTPPTSDQGIPRARDTSPEITVRQAAHIEQPPLDQTTDPLTGPGNLPSGSSPAHYQIADLPLGTPIARVTN DRPIAGYFLPPRLVDRLPQPDSLTGFRKAGPYTYVDLIDGGTVLLGADLQSNIRARMSNELWASGPRLEQVAGTLQWRTV ASNGSSTIDASQLFITRVPAPADEAHATPPKRPRIAGDEQQPTDPSSANRAIADAELDALIDPWKTWGIIGQPGSPDDIN INGSRYRTLPRGPAHNDPIVYIKHPYHLMYDYATLDRTLRTDFLQQPRGAIRVPPALHWEVDPALPFQRPMKETVATYFP ELSDVTLHNVAKRQFTLANGSELATGSGLTLLRQAFNDWKTGTVNPRPELVDPLLMLDSLPRSITEGNQKVELPVANVKA GLRRLDFDPARFPEEWRYFMPSQSAVDIKRFAAGLLTRNGYSVFEPSPAQSFAAVVFTRTGHDFVFFLSLHRVRGRQIQQ PANQDPNAANIRLIDQVGPDAAQAVEAAHPANKVVWLRGGVQTLAPYPDTFFIIRDDYARL
Sequences:
>Translated_541_residues MSPKKPIRPRTPPTSDQGIPRARDTSPEITVRQAAHIEQPPLDQTTDPLTGPGNLPSGSSPAHYQIADLPLGTPIARVTN DRPIAGYFLPPRLVDRLPQPDSLTGFRKAGPYTYVDLIDGGTVLLGADLQSNIRARMSNELWASGPRLEQVAGTLQWRTV ASNGSSTIDASQLFITRVPAPADEAHATPPKRPRIAGDEQQPTDPSSANRAIADAELDALIDPWKTWGIIGQPGSPDDIN INGSRYRTLPRGPAHNDPIVYIKHPYHLMYDYATLDRTLRTDFLQQPRGAIRVPPALHWEVDPALPFQRPMKETVATYFP ELSDVTLHNVAKRQFTLANGSELATGSGLTLLRQAFNDWKTGTVNPRPELVDPLLMLDSLPRSITEGNQKVELPVANVKA GLRRLDFDPARFPEEWRYFMPSQSAVDIKRFAAGLLTRNGYSVFEPSPAQSFAAVVFTRTGHDFVFFLSLHRVRGRQIQQ PANQDPNAANIRLIDQVGPDAAQAVEAAHPANKVVWLRGGVQTLAPYPDTFFIIRDDYARL >Mature_540_residues SPKKPIRPRTPPTSDQGIPRARDTSPEITVRQAAHIEQPPLDQTTDPLTGPGNLPSGSSPAHYQIADLPLGTPIARVTND RPIAGYFLPPRLVDRLPQPDSLTGFRKAGPYTYVDLIDGGTVLLGADLQSNIRARMSNELWASGPRLEQVAGTLQWRTVA SNGSSTIDASQLFITRVPAPADEAHATPPKRPRIAGDEQQPTDPSSANRAIADAELDALIDPWKTWGIIGQPGSPDDINI NGSRYRTLPRGPAHNDPIVYIKHPYHLMYDYATLDRTLRTDFLQQPRGAIRVPPALHWEVDPALPFQRPMKETVATYFPE LSDVTLHNVAKRQFTLANGSELATGSGLTLLRQAFNDWKTGTVNPRPELVDPLLMLDSLPRSITEGNQKVELPVANVKAG LRRLDFDPARFPEEWRYFMPSQSAVDIKRFAAGLLTRNGYSVFEPSPAQSFAAVVFTRTGHDFVFFLSLHRVRGRQIQQP ANQDPNAANIRLIDQVGPDAAQAVEAAHPANKVVWLRGGVQTLAPYPDTFFIIRDDYARL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59714; Mature: 59583
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPKKPIRPRTPPTSDQGIPRARDTSPEITVRQAAHIEQPPLDQTTDPLTGPGNLPSGSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PAHYQIADLPLGTPIARVTNDRPIAGYFLPPRLVDRLPQPDSLTGFRKAGPYTYVDLIDG CCEEEEECCCCCCCHHHHCCCCCEEEEECCHHHHHHCCCCCCCCCHHHCCCEEEEEEECC GTVLLGADLQSNIRARMSNELWASGPRLEQVAGTLQWRTVASNGSSTIDASQLFITRVPA CEEEEECCHHHHHHHHHCCHHHCCCCCHHHHHCCEEEEEEECCCCCCEECCEEEEEECCC PADEAHATPPKRPRIAGDEQQPTDPSSANRAIADAELDALIDPWKTWGIIGQPGSPDDIN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCEE INGSRYRTLPRGPAHNDPIVYIKHPYHLMYDYATLDRTLRTDFLQQPRGAIRVPPALHWE CCCCEEEECCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCEECCCCEEEE VDPALPFQRPMKETVATYFPELSDVTLHNVAKRQFTLANGSELATGSGLTLLRQAFNDWK CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHCCC TGTVNPRPELVDPLLMLDSLPRSITEGNQKVELPVANVKAGLRRLDFDPARFPEEWRYFM CCCCCCCHHHHHHHHHHHHCCHHHHCCCCEEEEEHHHHHHHHHHCCCCHHCCCHHHHHHC PSQSAVDIKRFAAGLLTRNGYSVFEPSPAQSFAAVVFTRTGHDFVFFLSLHRVRGRQIQQ CCCCHHHHHHHHHHHHHCCCCCEECCCCHHCEEEEEEEECCCCEEEEEEHHHHCCHHHCC PANQDPNAANIRLIDQVGPDAAQAVEAAHPANKVVWLRGGVQTLAPYPDTFFIIRDDYAR CCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCHHHCCCCCEEEEEECCHHC L C >Mature Secondary Structure SPKKPIRPRTPPTSDQGIPRARDTSPEITVRQAAHIEQPPLDQTTDPLTGPGNLPSGSS CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PAHYQIADLPLGTPIARVTNDRPIAGYFLPPRLVDRLPQPDSLTGFRKAGPYTYVDLIDG CCEEEEECCCCCCCHHHHCCCCCEEEEECCHHHHHHCCCCCCCCCHHHCCCEEEEEEECC GTVLLGADLQSNIRARMSNELWASGPRLEQVAGTLQWRTVASNGSSTIDASQLFITRVPA CEEEEECCHHHHHHHHHCCHHHCCCCCHHHHHCCEEEEEEECCCCCCEECCEEEEEECCC PADEAHATPPKRPRIAGDEQQPTDPSSANRAIADAELDALIDPWKTWGIIGQPGSPDDIN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCEE INGSRYRTLPRGPAHNDPIVYIKHPYHLMYDYATLDRTLRTDFLQQPRGAIRVPPALHWE CCCCEEEECCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCEECCCCEEEE VDPALPFQRPMKETVATYFPELSDVTLHNVAKRQFTLANGSELATGSGLTLLRQAFNDWK CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHCCC TGTVNPRPELVDPLLMLDSLPRSITEGNQKVELPVANVKAGLRRLDFDPARFPEEWRYFM CCCCCCCHHHHHHHHHHHHCCHHHHCCCCEEEEEHHHHHHHHHHCCCCHHCCCHHHHHHC PSQSAVDIKRFAAGLLTRNGYSVFEPSPAQSFAAVVFTRTGHDFVFFLSLHRVRGRQIQQ CCCCHHHHHHHHHHHHHCCCCCEECCCCHHCEEEEEEEECCCCEEEEEEHHHHCCHHHCC PANQDPNAANIRLIDQVGPDAAQAVEAAHPANKVVWLRGGVQTLAPYPDTFFIIRDDYAR CCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCHHHCCCCCEEEEEECCHHC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA