Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77457933

Identifier: 77457933

GI number: 77457933

Start: 1902038

End: 1902964

Strand: Reverse

Name: 77457933

Synonym: Pfl01_1706

Alternate gene names: NA

Gene position: 1902964-1902038 (Counterclockwise)

Preceding gene: 77457936

Following gene: 77457932

Centisome position: 29.56

GC content: 61.06

Gene sequence:

>927_bases
GTGAGCGCTGACTACCCACGCGACCTGATCGGTTACGGCAGTAACCCTCCTCACCCACACTGGCCGGGCAATGCCCGGCT
CGCCCTGTCGTTCGTACTCAATTACGAAGAAGGCGGCGAGCGCAACATCCTGCACGGCGACAAAGAATCGGAAGCCTTCC
TCTCGGAAATGGTCGCGGCCCAGCCTCTGCAAGGCGCGCGCAACATGAGCATGGAATCGCTTTACGAGTATGGCAGCCGT
GCCGGCGTCTGGCGGATCCTGAAACTGTTCAAGGAATTCGACATTCCGCTGACCATCTTCGCCGTGGCCATGGCCGCCCA
ACGTCACCCGGACGTGATCCGCGCGATGGTCGCGGCCGGTCACGAGATCTGCAGCCACGGTTACCGCTGGATCGACTACC
AGTACATGGACGAGGCGCAGGAACGCGAGCACATGCTCGAAGCGATCCGCATCCTCACCGAACTCACCGGCGAACGCCCG
CTGGGCTGGTACACCGGTCGCACCGGCCCGAACACCCGTCGCCTGGTGATGGAAGAAGGCGGTTTCCTCTACGACTGCGA
CACCTATGACGACGACCTGCCCTACTGGGAACCGAACAACCCGACCGGCAAGCCGCACCTGGTGATCCCGTACACCCTGG
ACACCAACGACATGCGCTTCACCCAGGTCCAGGGTTTCAACAAGGGCGACGATTTCTTCGAATACCTCAAGGATGCGTTC
GACGTGCTGTATGCCGAAGGCGCCGAAGCACCGAAGATGCTATCGATCGGCCTGCACTGCCGTCTGATCGGCCGTCCGGC
GCGTCTGGCTTCGCTTAAGCGCTTTATCGAATACGCTAAAAGTCATGAACAGGTGTGGTTCAGCCGTCGCGTCGACATCG
CACGTCACTGGCACGAAACCCACCCGTACCAAGGGGCTGCCAAATGA

Upstream 100 bases:

>100_bases
AATAAAGTTGTATACAATCAGCCCATCGCTGTGACGCCAGCCTGCCATCCAAACTTCAGGGCGCCACACAATCTGTCAAC
GAATAAGAAGGAAGACTGCA

Downstream 100 bases:

>100_bases
GCACCTTTCAAACCCTGCAACCGTCGACCCTGAGCCGCGACGCCTTCGTCAAAGCCTTCGCCGACATCTACGAACATTCG
CCATGGGTGGCCGAGAAGGC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Domain Protein; Hydrolase; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Uricase; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Deacetylase

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSADYPRDLIGYGSNPPHPHWPGNARLALSFVLNYEEGGERNILHGDKESEAFLSEMVAAQPLQGARNMSMESLYEYGSR
AGVWRILKLFKEFDIPLTIFAVAMAAQRHPDVIRAMVAAGHEICSHGYRWIDYQYMDEAQEREHMLEAIRILTELTGERP
LGWYTGRTGPNTRRLVMEEGGFLYDCDTYDDDLPYWEPNNPTGKPHLVIPYTLDTNDMRFTQVQGFNKGDDFFEYLKDAF
DVLYAEGAEAPKMLSIGLHCRLIGRPARLASLKRFIEYAKSHEQVWFSRRVDIARHWHETHPYQGAAK

Sequences:

>Translated_308_residues
MSADYPRDLIGYGSNPPHPHWPGNARLALSFVLNYEEGGERNILHGDKESEAFLSEMVAAQPLQGARNMSMESLYEYGSR
AGVWRILKLFKEFDIPLTIFAVAMAAQRHPDVIRAMVAAGHEICSHGYRWIDYQYMDEAQEREHMLEAIRILTELTGERP
LGWYTGRTGPNTRRLVMEEGGFLYDCDTYDDDLPYWEPNNPTGKPHLVIPYTLDTNDMRFTQVQGFNKGDDFFEYLKDAF
DVLYAEGAEAPKMLSIGLHCRLIGRPARLASLKRFIEYAKSHEQVWFSRRVDIARHWHETHPYQGAAK
>Mature_307_residues
SADYPRDLIGYGSNPPHPHWPGNARLALSFVLNYEEGGERNILHGDKESEAFLSEMVAAQPLQGARNMSMESLYEYGSRA
GVWRILKLFKEFDIPLTIFAVAMAAQRHPDVIRAMVAAGHEICSHGYRWIDYQYMDEAQEREHMLEAIRILTELTGERPL
GWYTGRTGPNTRRLVMEEGGFLYDCDTYDDDLPYWEPNNPTGKPHLVIPYTLDTNDMRFTQVQGFNKGDDFFEYLKDAFD
VLYAEGAEAPKMLSIGLHCRLIGRPARLASLKRFIEYAKSHEQVWFSRRVDIARHWHETHPYQGAAK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35451; Mature: 35320

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADYPRDLIGYGSNPPHPHWPGNARLALSFVLNYEEGGERNILHGDKESEAFLSEMVAA
CCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
QPLQGARNMSMESLYEYGSRAGVWRILKLFKEFDIPLTIFAVAMAAQRHPDVIRAMVAAG
CCCCHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
HEICSHGYRWIDYQYMDEAQEREHMLEAIRILTELTGERPLGWYTGRTGPNTRRLVMEEG
HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEECC
GFLYDCDTYDDDLPYWEPNNPTGKPHLVIPYTLDTNDMRFTQVQGFNKGDDFFEYLKDAF
CEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHH
DVLYAEGAEAPKMLSIGLHCRLIGRPARLASLKRFIEYAKSHEQVWFSRRVDIARHWHET
HHHHHCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPYQGAAK
CCCCCCCC
>Mature Secondary Structure 
SADYPRDLIGYGSNPPHPHWPGNARLALSFVLNYEEGGERNILHGDKESEAFLSEMVAA
CCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
QPLQGARNMSMESLYEYGSRAGVWRILKLFKEFDIPLTIFAVAMAAQRHPDVIRAMVAAG
CCCCHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
HEICSHGYRWIDYQYMDEAQEREHMLEAIRILTELTGERPLGWYTGRTGPNTRRLVMEEG
HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEECC
GFLYDCDTYDDDLPYWEPNNPTGKPHLVIPYTLDTNDMRFTQVQGFNKGDDFFEYLKDAF
CEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHH
DVLYAEGAEAPKMLSIGLHCRLIGRPARLASLKRFIEYAKSHEQVWFSRRVDIARHWHET
HHHHHCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPYQGAAK
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA