| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is allA [H]
Identifier: 77457930
GI number: 77457930
Start: 1899816
End: 1900319
Strand: Reverse
Name: allA [H]
Synonym: Pfl01_1703
Alternate gene names: 77457930
Gene position: 1900319-1899816 (Counterclockwise)
Preceding gene: 77457931
Following gene: 77457929
Centisome position: 29.52
GC content: 57.74
Gene sequence:
>504_bases ATGCGCACACTGACGATTGAACCGCTGACCAAAGAAGCCTTCGCCCCTTTCGGTGACGTGATCGAAACCGACGGCAGCGA TCACTTCATGATCAACAACGGTTCGACCATGCGCTTCCACAAACTGGCGACGGTCGAAACCGCAACGCCTGAGGACAACG CGATCATCAGCATTTTCCGCGCCGACGCGCAGGACATGCCGCTGACCGTCAGCATGCTGGAACGCCATCCGCTGGGCAGC CAGGCTTTCATTCCGCTGCTCGGCAACCCCTTTCTGATCGTGGTCGCGCCACTTGGCGATGTACCTGTATCAGGCTTGGT CCGCGCCTTCGTCACCAACGGCAGGCAGGGCATCAATTACCATCGCGGCGTCTGGCACCACCCGGTGCTGACGATCGAAA AGCGGGATGACTTCCTGGTGGTTGATCGCAGTGGCAAAGGCAATAACTGCGATGAGCATTTTTTCAAAGAGGATGAGCGT TTGATCCTCGCCCCCCACCAATAA
Upstream 100 bases:
>100_bases CAGGCCGGCTCCCACAAGGAAATGTATTCCAGATGTGGGAGCTGGCCTGCCAGCGATAGCAACAGAACCAACAACACAGA ATTCGGATAAGAAGAACAGC
Downstream 100 bases:
>100_bases GAGAAGGTCTGATCACTCGACAACAAGAGTGACAGGCGAGAGGTAAAGACTGTGGAAGCACATCTGTTGGAATGGCTGAA CCTGAGCGTGCGCTGGGTTC
Product: ureidoglycolate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MRTLTIEPLTKEAFAPFGDVIETDGSDHFMINNGSTMRFHKLATVETATPEDNAIISIFRADAQDMPLTVSMLERHPLGS QAFIPLLGNPFLIVVAPLGDVPVSGLVRAFVTNGRQGINYHRGVWHHPVLTIEKRDDFLVVDRSGKGNNCDEHFFKEDER LILAPHQ
Sequences:
>Translated_167_residues MRTLTIEPLTKEAFAPFGDVIETDGSDHFMINNGSTMRFHKLATVETATPEDNAIISIFRADAQDMPLTVSMLERHPLGS QAFIPLLGNPFLIVVAPLGDVPVSGLVRAFVTNGRQGINYHRGVWHHPVLTIEKRDDFLVVDRSGKGNNCDEHFFKEDER LILAPHQ >Mature_167_residues MRTLTIEPLTKEAFAPFGDVIETDGSDHFMINNGSTMRFHKLATVETATPEDNAIISIFRADAQDMPLTVSMLERHPLGS QAFIPLLGNPFLIVVAPLGDVPVSGLVRAFVTNGRQGINYHRGVWHHPVLTIEKRDDFLVVDRSGKGNNCDEHFFKEDER LILAPHQ
Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]
COG id: COG3194
COG function: function code F; Ureidoglycolate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureidoglycolate hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786714, Length=156, Percent_Identity=51.2820512820513, Blast_Score=160, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6322223, Length=196, Percent_Identity=27.0408163265306, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR007247 [H]
Pfam domain/function: PF04115 Ureidogly_hydro [H]
EC number: =3.5.3.19 [H]
Molecular weight: Translated: 18630; Mature: 18630
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLTIEPLTKEAFAPFGDVIETDGSDHFMINNGSTMRFHKLATVETATPEDNAIISIFR CCEEEECCCCHHHCCCCCCEEECCCCCEEEEECCCEEEEEEEEEEEECCCCCCEEEEEEE ADAQDMPLTVSMLERHPLGSQAFIPLLGNPFLIVVAPLGDVPVSGLVRAFVTNGRQGINY CCCCCCCEEEEHHHCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCC HRGVWHHPVLTIEKRDDFLVVDRSGKGNNCDEHFFKEDERLILAPHQ CCCEECCCEEEEECCCCEEEEECCCCCCCCHHHHHCCCCEEEEECCC >Mature Secondary Structure MRTLTIEPLTKEAFAPFGDVIETDGSDHFMINNGSTMRFHKLATVETATPEDNAIISIFR CCEEEECCCCHHHCCCCCCEEECCCCCEEEEECCCEEEEEEEEEEEECCCCCCEEEEEEE ADAQDMPLTVSMLERHPLGSQAFIPLLGNPFLIVVAPLGDVPVSGLVRAFVTNGRQGINY CCCCCCCEEEEHHHCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCC HRGVWHHPVLTIEKRDDFLVVDRSGKGNNCDEHFFKEDERLILAPHQ CCCEECCCEEEEECCCCEEEEECCCCCCCCHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA