| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457929
Identifier: 77457929
GI number: 77457929
Start: 1898451
End: 1899764
Strand: Reverse
Name: 77457929
Synonym: Pfl01_1702
Alternate gene names: NA
Gene position: 1899764-1898451 (Counterclockwise)
Preceding gene: 77457930
Following gene: 77457928
Centisome position: 29.51
GC content: 63.09
Gene sequence:
>1314_bases GTGGAAGCACATCTGTTGGAATGGCTGAACCTGAGCGTGCGCTGGGTTCACATGATCACTGGCGTGGCCTGGATCGGCGC GTCGTTCTACTTCGTCTGGCTGGAGAACAACCTCAACCGCGTCAACCCGAAAACCGGTCTTGCCGGTGATCTGTGGGCGA TCCACGGCGGCGGTATCTATCACCTGGAAAAATACAAACTGGCCCCTCCGTCGATGCCGGAGAACCTGCACTGGTTCAAA TGGGAAGCCTATTTCACCTGGATGTCGGGGATCGCGCTGCTGTGCGTGGTGTTCTACTCCAACCCCGTGCTCTACCTCGT GGCACCCGGCAGCGGCCTGACCGGCCCTGAAGGCGTGGCCATCGGCATCGGTTCGCTGATCGCCGGCTGGTTCATCTACG ACTTCCTCTGCGATTCGCCTCTGGGCAAAAAACCTGCCCTGCTCGGCTTCATCCTGTTCGTGCTGATCATCGGCGCGGCG TATGGCTTCAGCAAGGTGTTCAGCGGTCGTGGTGCATACCTGCACGTCGGCGCGATCATCGGCACCATCATGGTCGGCAA CGTGTTCCGCATCATCATGCCGGCGCAGCGCGCACTGGTCGCCGCGATCGCCGAGAACCGCACGCCGGATCCGGCCCTGC CGGCCAAAGGCCTGCTGCGTTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCACTTC CCGAGCACCTACGGCAGCCAGTACAACTGGCTGATCCTGGCCGGGATTGCGGTGTTGGCGGTGTTGGTGCGTCACTACTT CAACACCCGTCACGACAGCCACAAGTTTGCCTGGACCCTGCCGGTGGCAGCGGTGGGCATGATCAGTCTGGCGTACGTCA CCGGCCCGGCGCCGATGTCGAACGCGCCGGACGTGGCCAAGGCGCCTGCAAAAATCGAGTACCAGCCACTGCCGGAAACG GCGCTGGGTGGTGGCGCGAAACCGGCTGAAGCAGCACAACCAGCCGCCCCTGCTGCACCGGCCGCCGCTCCGGCCCAGGC GTCCAACGCCGGCCCTGCGTTCGACAAGGTGCACAACGTGATCCAGGAACGCTGCGCGGTCTGCCACTCGGCCAAACCGA CCAGCCCGCTGTTCAGCGCTGCCCCGGCCGGTGTGATGTTCGACACCCCCGAGCAGATCCGCCAGAACGCGGCACGGATC CAGGCGCAAGCCATCACCACGCAGATCATGCCACTGGGCAACATCACTCAGATGACCCAGCAGGAACGTGACCTGATCGG TGCATGGATCGCCCAGGGAGCCCAGACCAACTAA
Upstream 100 bases:
>100_bases GCATTTTTTCAAAGAGGATGAGCGTTTGATCCTCGCCCCCCACCAATAAGAGAAGGTCTGATCACTCGACAACAAGAGTG ACAGGCGAGAGGTAAAGACT
Downstream 100 bases:
>100_bases GCCGTAAAAACCTCGCGAGCAGGCTCGCGCCCACACGGATCATCCGGATCCTGTGGGCGCCGGCTTGCCTGCGATTGGCC GCATAAGCGGTCTGCCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MEAHLLEWLNLSVRWVHMITGVAWIGASFYFVWLENNLNRVNPKTGLAGDLWAIHGGGIYHLEKYKLAPPSMPENLHWFK WEAYFTWMSGIALLCVVFYSNPVLYLVAPGSGLTGPEGVAIGIGSLIAGWFIYDFLCDSPLGKKPALLGFILFVLIIGAA YGFSKVFSGRGAYLHVGAIIGTIMVGNVFRIIMPAQRALVAAIAENRTPDPALPAKGLLRSRHNNYFTLPVLFIMISNHF PSTYGSQYNWLILAGIAVLAVLVRHYFNTRHDSHKFAWTLPVAAVGMISLAYVTGPAPMSNAPDVAKAPAKIEYQPLPET ALGGGAKPAEAAQPAAPAAPAAAPAQASNAGPAFDKVHNVIQERCAVCHSAKPTSPLFSAAPAGVMFDTPEQIRQNAARI QAQAITTQIMPLGNITQMTQQERDLIGAWIAQGAQTN
Sequences:
>Translated_437_residues MEAHLLEWLNLSVRWVHMITGVAWIGASFYFVWLENNLNRVNPKTGLAGDLWAIHGGGIYHLEKYKLAPPSMPENLHWFK WEAYFTWMSGIALLCVVFYSNPVLYLVAPGSGLTGPEGVAIGIGSLIAGWFIYDFLCDSPLGKKPALLGFILFVLIIGAA YGFSKVFSGRGAYLHVGAIIGTIMVGNVFRIIMPAQRALVAAIAENRTPDPALPAKGLLRSRHNNYFTLPVLFIMISNHF PSTYGSQYNWLILAGIAVLAVLVRHYFNTRHDSHKFAWTLPVAAVGMISLAYVTGPAPMSNAPDVAKAPAKIEYQPLPET ALGGGAKPAEAAQPAAPAAPAAAPAQASNAGPAFDKVHNVIQERCAVCHSAKPTSPLFSAAPAGVMFDTPEQIRQNAARI QAQAITTQIMPLGNITQMTQQERDLIGAWIAQGAQTN >Mature_437_residues MEAHLLEWLNLSVRWVHMITGVAWIGASFYFVWLENNLNRVNPKTGLAGDLWAIHGGGIYHLEKYKLAPPSMPENLHWFK WEAYFTWMSGIALLCVVFYSNPVLYLVAPGSGLTGPEGVAIGIGSLIAGWFIYDFLCDSPLGKKPALLGFILFVLIIGAA YGFSKVFSGRGAYLHVGAIIGTIMVGNVFRIIMPAQRALVAAIAENRTPDPALPAKGLLRSRHNNYFTLPVLFIMISNHF PSTYGSQYNWLILAGIAVLAVLVRHYFNTRHDSHKFAWTLPVAAVGMISLAYVTGPAPMSNAPDVAKAPAKIEYQPLPET ALGGGAKPAEAAQPAAPAAPAAAPAQASNAGPAFDKVHNVIQERCAVCHSAKPTSPLFSAAPAGVMFDTPEQIRQNAARI QAQAITTQIMPLGNITQMTQQERDLIGAWIAQGAQTN
Specific function: Unknown
COG id: COG3748
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47150; Mature: 47150
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAHLLEWLNLSVRWVHMITGVAWIGASFYFVWLENNLNRVNPKTGLAGDLWAIHGGGIY CCCHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEE HLEKYKLAPPSMPENLHWFKWEAYFTWMSGIALLCVVFYSNPVLYLVAPGSGLTGPEGVA EEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCE IGIGSLIAGWFIYDFLCDSPLGKKPALLGFILFVLIIGAAYGFSKVFSGRGAYLHVGAII EEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHH GTIMVGNVFRIIMPAQRALVAAIAENRTPDPALPAKGLLRSRHNNYFTLPVLFIMISNHF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHCCC PSTYGSQYNWLILAGIAVLAVLVRHYFNTRHDSHKFAWTLPVAAVGMISLAYVTGPAPMS CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHEECCCCCC NAPDVAKAPAKIEYQPLPETALGGGAKPAEAAQPAAPAAPAAAPAQASNAGPAFDKVHNV CCCCHHCCCCCEEECCCCCHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH IQERCAVCHSAKPTSPLFSAAPAGVMFDTPEQIRQNAARIQAQAITTQIMPLGNITQMTQ HHHHHHHHHCCCCCCCHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH QERDLIGAWIAQGAQTN HHHHHHHHHHHCCCCCC >Mature Secondary Structure MEAHLLEWLNLSVRWVHMITGVAWIGASFYFVWLENNLNRVNPKTGLAGDLWAIHGGGIY CCCHHHHHHCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEE HLEKYKLAPPSMPENLHWFKWEAYFTWMSGIALLCVVFYSNPVLYLVAPGSGLTGPEGVA EEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCE IGIGSLIAGWFIYDFLCDSPLGKKPALLGFILFVLIIGAAYGFSKVFSGRGAYLHVGAII EEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHH GTIMVGNVFRIIMPAQRALVAAIAENRTPDPALPAKGLLRSRHNNYFTLPVLFIMISNHF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHCCC PSTYGSQYNWLILAGIAVLAVLVRHYFNTRHDSHKFAWTLPVAAVGMISLAYVTGPAPMS CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHEECCCCCC NAPDVAKAPAKIEYQPLPETALGGGAKPAEAAQPAAPAAPAAAPAQASNAGPAFDKVHNV CCCCHHCCCCCEEECCCCCHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH IQERCAVCHSAKPTSPLFSAAPAGVMFDTPEQIRQNAARIQAQAITTQIMPLGNITQMTQ HHHHHHHHHCCCCCCCHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH QERDLIGAWIAQGAQTN HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA