| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457913
Identifier: 77457913
GI number: 77457913
Start: 1882182
End: 1883246
Strand: Reverse
Name: 77457913
Synonym: Pfl01_1686
Alternate gene names: NA
Gene position: 1883246-1882182 (Counterclockwise)
Preceding gene: 77457915
Following gene: 77457912
Centisome position: 29.25
GC content: 59.91
Gene sequence:
>1065_bases ATGAAACAGCTTTTCCTGGCAACACTGTTAGGCTCGACCATTGCCATGTGCACCGCCGCCATGGCGGCTGATGATCTGAA AACCCTCGAAGCCGCTGCGAAAGCGGAAGGTGCCGTCAACAGCGTCGGCATGCCCGATGACTGGGCCAACTGGAAAGGCA CTTGGGAAGACCTGGCCAAGAACTACGGCCTGAAACACATCGACACCGACATGAGCTCGGCCCAGGAAATCGCCAAGTTT GCCGCCGAGAAAGACAACGCCACCGCCGACATCGGCGATGTCGGCGCGGCCTTTGGCCCGATCGCGGTCAAGCAAGGCGT GGTGCAACCGTACAAGCCGAGCACCTGGGATCAAGTGCCGGACTGGGCCAAGGACAAGGACGGCAACTGGGCACTGGCCT ACACCGGCACCATCGCCTTCATCGTCAACAAGAAGCTGCTGCACGGTTCCGAAGTACCGACCAAATGGGCTGACCTCAAG GGCGGCAAATACAAGGTTTCCATCGGTGACGTGAGCACCGCTGCACAAGCGGCAAACGGCGTGCTCGCCGCAGCACTGGC CAACGGTGGCGACGAGAAAAACCTCCAGCCGGCCCTGCTGCTGTTTGCAGACATCGCCAAGCAGGGTCGCCTGTCGATGG CCAACCCGACCATCGCCACCATGGAAAAAGGCGAGATCGAAGTTGGCGTGGTCTGGGACTTCAACGGCCTGAGCTACAAG GCCAAGATGGCCAACCCGGATGACTACGTGGTGCTGATCCCGTCCGACGGTTCGGTGATTTCCGGCTACACCACCATCAT CAACAAATACGCGAAGAACCCGAACGCCGCCAAGCTGACCCGCGAATACATCTTCAGCGATGCCGGCCAGACCAACCTCG CCCGCGGCAACGCTCGCCCGATCCGCGCCGAGCACCTGCAACTGCCGGAAGACGTGAAAGCCAAGCTGCTGCCGAACGAG CAGTACAAGAAGGTCACGCCGATCAAGGACGCCGATGCCTGGGAAAAAACCTCCAAGGCCCTGCCGCAGAAGTGGAACGA AGAAGTCATCGTAGAAATGAAGTAA
Upstream 100 bases:
>100_bases TCAAAGTGTCATCCGGCCACCTTAAATTGGCTCAGGTATTGCTGACCTAGACCAACACAAACCGCAATCGCAGCGTTGAA CACGACCAAGGAGCTTCGGA
Downstream 100 bases:
>100_bases GCCCGTAAACCCAACAGGGTTTGACGCAAAACTCTGTGGGAGCGGGCTTGCCCGCGATGGCAATTTCACATTCAACAAAT GTGTTGAATTGCATGACGCC
Product: ABC transporter, periplasmic substrate-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MKQLFLATLLGSTIAMCTAAMAADDLKTLEAAAKAEGAVNSVGMPDDWANWKGTWEDLAKNYGLKHIDTDMSSAQEIAKF AAEKDNATADIGDVGAAFGPIAVKQGVVQPYKPSTWDQVPDWAKDKDGNWALAYTGTIAFIVNKKLLHGSEVPTKWADLK GGKYKVSIGDVSTAAQAANGVLAAALANGGDEKNLQPALLLFADIAKQGRLSMANPTIATMEKGEIEVGVVWDFNGLSYK AKMANPDDYVVLIPSDGSVISGYTTIINKYAKNPNAAKLTREYIFSDAGQTNLARGNARPIRAEHLQLPEDVKAKLLPNE QYKKVTPIKDADAWEKTSKALPQKWNEEVIVEMK
Sequences:
>Translated_354_residues MKQLFLATLLGSTIAMCTAAMAADDLKTLEAAAKAEGAVNSVGMPDDWANWKGTWEDLAKNYGLKHIDTDMSSAQEIAKF AAEKDNATADIGDVGAAFGPIAVKQGVVQPYKPSTWDQVPDWAKDKDGNWALAYTGTIAFIVNKKLLHGSEVPTKWADLK GGKYKVSIGDVSTAAQAANGVLAAALANGGDEKNLQPALLLFADIAKQGRLSMANPTIATMEKGEIEVGVVWDFNGLSYK AKMANPDDYVVLIPSDGSVISGYTTIINKYAKNPNAAKLTREYIFSDAGQTNLARGNARPIRAEHLQLPEDVKAKLLPNE QYKKVTPIKDADAWEKTSKALPQKWNEEVIVEMK >Mature_354_residues MKQLFLATLLGSTIAMCTAAMAADDLKTLEAAAKAEGAVNSVGMPDDWANWKGTWEDLAKNYGLKHIDTDMSSAQEIAKF AAEKDNATADIGDVGAAFGPIAVKQGVVQPYKPSTWDQVPDWAKDKDGNWALAYTGTIAFIVNKKLLHGSEVPTKWADLK GGKYKVSIGDVSTAAQAANGVLAAALANGGDEKNLQPALLLFADIAKQGRLSMANPTIATMEKGEIEVGVVWDFNGLSYK AKMANPDDYVVLIPSDGSVISGYTTIINKYAKNPNAAKLTREYIFSDAGQTNLARGNARPIRAEHLQLPEDVKAKLLPNE QYKKVTPIKDADAWEKTSKALPQKWNEEVIVEMK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38159; Mature: 38159
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLFLATLLGSTIAMCTAAMAADDLKTLEAAAKAEGAVNSVGMPDDWANWKGTWEDLAK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH NYGLKHIDTDMSSAQEIAKFAAEKDNATADIGDVGAAFGPIAVKQGVVQPYKPSTWDQVP HCCCCEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCC DWAKDKDGNWALAYTGTIAFIVNKKLLHGSEVPTKWADLKGGKYKVSIGDVSTAAQAANG CCCCCCCCCEEEEEECEEEEEEEHHHHCCCCCCCHHHHCCCCEEEEEECCHHHHHHHHCC VLAAALANGGDEKNLQPALLLFADIAKQGRLSMANPTIATMEKGEIEVGVVWDFNGLSYK EEEEEHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEEEECCCCEEE AKMANPDDYVVLIPSDGSVISGYTTIINKYAKNPNAAKLTREYIFSDAGQTNLARGNARP EECCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCC IRAEHLQLPEDVKAKLLPNEQYKKVTPIKDADAWEKTSKALPQKWNEEVIVEMK CCHHHCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure MKQLFLATLLGSTIAMCTAAMAADDLKTLEAAAKAEGAVNSVGMPDDWANWKGTWEDLAK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH NYGLKHIDTDMSSAQEIAKFAAEKDNATADIGDVGAAFGPIAVKQGVVQPYKPSTWDQVP HCCCCEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCC DWAKDKDGNWALAYTGTIAFIVNKKLLHGSEVPTKWADLKGGKYKVSIGDVSTAAQAANG CCCCCCCCCEEEEEECEEEEEEEHHHHCCCCCCCHHHHCCCCEEEEEECCHHHHHHHHCC VLAAALANGGDEKNLQPALLLFADIAKQGRLSMANPTIATMEKGEIEVGVVWDFNGLSYK EEEEEHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEEEECCCCEEE AKMANPDDYVVLIPSDGSVISGYTTIINKYAKNPNAAKLTREYIFSDAGQTNLARGNARP EECCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCC IRAEHLQLPEDVKAKLLPNEQYKKVTPIKDADAWEKTSKALPQKWNEEVIVEMK CCHHHCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA