| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457912
Identifier: 77457912
GI number: 77457912
Start: 1881195
End: 1882001
Strand: Reverse
Name: 77457912
Synonym: Pfl01_1685
Alternate gene names: NA
Gene position: 1882001-1881195 (Counterclockwise)
Preceding gene: 77457913
Following gene: 77457911
Centisome position: 29.23
GC content: 63.57
Gene sequence:
>807_bases ATGAAGCACACCGTCATCCTTGTCGTGCTCGACGGCCTCAACTACGAAGTCGCGCGTCACGCCATGGGGCATCTGCAGGC TTACGTTGGCGCAGGACGCGCCGCGCTCTACCAGTTGGAGTGCGAGCTGCCGGCCCTGTCACGACCGCTTTACGAATGCA TCCTAACGGGCGTACCGCCGATCGACAGCGGCATCGTCCACAACAACGTCTCGCGCCTGTCCAGTCAGCGCAGCATCTAT CACTACGCCCGCGATGCCGGTCTGAAAACCGCCGCTGCGGCGTACCACTGGGTCAGTGAGCTCTACAACCGCTCGCCGTT CGTAGCCGCCAGAGATCGTCATACCGATGACCCGACGCTACCGATCCAGCATGGCCACTTCTACTGGAACGATCACTACC CGGACTCGCACCTGTTCGCCGACGCCGAAAACCTGCGTCTGCGCCATGCCCCGGATTTTCTGCTGATCCACCCGATGAAC ATCGACGACGCCGGGCACAAGCACGGCCTCGACACCCCGCAATACCGCAACAGCGCACGCAGCGCCGACATCATCCTCGC CGACTACCTGCAAGGCTGGCTCGACGCCGGTTGCCAGGTGCTGGTGACCGCCGACCACGGCATGAACAACGACCGCTCGC ACAACGGCCTGCTGCCGGAAGAACGCCAGGTTCCGCTGTTCGTACTCGGCGACGCCTTCAGCCTGACAGCCGATGCCGCA CCGAAGCAGACCGACATCTGCGGCACCGTCTGCGAGCTGCTCGGCGTGCCCCACGACAAACCTGTGTGCCGGGAGTTGCT CAAGTGA
Upstream 100 bases:
>100_bases GTGTTGAATTGCATGACGCCTTCGCGGGCAAGCCCGCTCCCACAGGATCCGTGTTGATTTCGAGTTTTCCGATTTATTGT TTCGCGGAGTTTTTGCCCCT
Downstream 100 bases:
>100_bases ACTCAATGACTCGCGGCAAATGGCTGGCCGCCCTGTGCCTGGTGCCTTTCGCACTGTTCTTTATCGTGTTCGAAATCGCC CCGCTGATCTGGGTGATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKHTVILVVLDGLNYEVARHAMGHLQAYVGAGRAALYQLECELPALSRPLYECILTGVPPIDSGIVHNNVSRLSSQRSIY HYARDAGLKTAAAAYHWVSELYNRSPFVAARDRHTDDPTLPIQHGHFYWNDHYPDSHLFADAENLRLRHAPDFLLIHPMN IDDAGHKHGLDTPQYRNSARSADIILADYLQGWLDAGCQVLVTADHGMNNDRSHNGLLPEERQVPLFVLGDAFSLTADAA PKQTDICGTVCELLGVPHDKPVCRELLK
Sequences:
>Translated_268_residues MKHTVILVVLDGLNYEVARHAMGHLQAYVGAGRAALYQLECELPALSRPLYECILTGVPPIDSGIVHNNVSRLSSQRSIY HYARDAGLKTAAAAYHWVSELYNRSPFVAARDRHTDDPTLPIQHGHFYWNDHYPDSHLFADAENLRLRHAPDFLLIHPMN IDDAGHKHGLDTPQYRNSARSADIILADYLQGWLDAGCQVLVTADHGMNNDRSHNGLLPEERQVPLFVLGDAFSLTADAA PKQTDICGTVCELLGVPHDKPVCRELLK >Mature_268_residues MKHTVILVVLDGLNYEVARHAMGHLQAYVGAGRAALYQLECELPALSRPLYECILTGVPPIDSGIVHNNVSRLSSQRSIY HYARDAGLKTAAAAYHWVSELYNRSPFVAARDRHTDDPTLPIQHGHFYWNDHYPDSHLFADAENLRLRHAPDFLLIHPMN IDDAGHKHGLDTPQYRNSARSADIILADYLQGWLDAGCQVLVTADHGMNNDRSHNGLLPEERQVPLFVLGDAFSLTADAA PKQTDICGTVCELLGVPHDKPVCRELLK
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29851; Mature: 29851
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHTVILVVLDGLNYEVARHAMGHLQAYVGAGRAALYQLECELPALSRPLYECILTGVPP CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCCC IDSGIVHNNVSRLSSQRSIYHYARDAGLKTAAAAYHWVSELYNRSPFVAARDRHTDDPTL CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC PIQHGHFYWNDHYPDSHLFADAENLRLRHAPDFLLIHPMNIDDAGHKHGLDTPQYRNSAR CEECCEEEECCCCCCCCEEECHHHCEEECCCCEEEEEECCCCCCCCCCCCCCHHHHCCCC SADIILADYLQGWLDAGCQVLVTADHGMNNDRSHNGLLPEERQVPLFVLGDAFSLTADAA CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCC PKQTDICGTVCELLGVPHDKPVCRELLK CCCHHHHHHHHHHHCCCCCCHHHHHHCC >Mature Secondary Structure MKHTVILVVLDGLNYEVARHAMGHLQAYVGAGRAALYQLECELPALSRPLYECILTGVPP CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCCC IDSGIVHNNVSRLSSQRSIYHYARDAGLKTAAAAYHWVSELYNRSPFVAARDRHTDDPTL CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC PIQHGHFYWNDHYPDSHLFADAENLRLRHAPDFLLIHPMNIDDAGHKHGLDTPQYRNSAR CEECCEEEECCCCCCCCEEECHHHCEEECCCCEEEEEECCCCCCCCCCCCCCHHHHCCCC SADIILADYLQGWLDAGCQVLVTADHGMNNDRSHNGLLPEERQVPLFVLGDAFSLTADAA CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCC PKQTDICGTVCELLGVPHDKPVCRELLK CCCHHHHHHHHHHHCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA