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The map label for this gene is potC [C]

Identifier: 77457911

GI number: 77457911

Start: 1880353

End: 1881189

Strand: Reverse

Name: potC [C]

Synonym: Pfl01_1684

Alternate gene names: 77457911

Gene position: 1881189-1880353 (Counterclockwise)

Preceding gene: 77457912

Following gene: 77457910

Centisome position: 29.22

GC content: 59.14

Gene sequence:

>837_bases
ATGACTCGCGGCAAATGGCTGGCCGCCCTGTGCCTGGTGCCTTTCGCACTGTTCTTTATCGTGTTCGAAATCGCCCCGCT
GATCTGGGTGATGATCAACAGCCTGCAATCGGAAGAATTCGGTTGGGGCTTTGCCAACTTCAGCAAGATCTTCAATTCGA
AGTTCTATCTGCAGGCGATCCAGTACAGCCTCGAAATCAGTTTCTGGTCGAGTGTGTTCGGCATCATTATCGCGGTGCTG
GGCGCCTACTCCCTGCGCCGGGTCGATTCGAAGCTGCGCAACTTCGTCAACGCCTTCGCCAACATGACCAGCAACTTCGC
CGGCGTGCCCCTGGCGTTTGCGTTCATCATCCTGCTCGGCTTCAACGGCAGCATCACCATCATGCTGAAGCAGGCCGGGA
TCATCGAGGACTTCAACCTGTATTCGAAAACCGGGTTGATCATCCTCTACACCTACTTCCAGATTCCCCTCGGCGTGTTG
CTGCTGTACCCGGCATTCGACGCCCTGCGTGAAGACTGGCGCGAATCCGCGGCACTGCTCGGCGCCGACAGCTGGCAGTT
CTGGCGCCACATCGGCCTGCCGGTACTGACCCCGGCCCTGCTCGGCACCTTCGTGATCCTGCTGGCCAACGCCCTCGGCG
CCTACGCCACGGTCTACGCCCTGACCACCGGCAACTTCAACGTATTGCCGATCCGGATTGCGGCGATGGTCTCTGGCGAC
ATTTCTCTCGATCCAAACCTGGCCAGTGCCTTGGCCGTGGTGCTGGTGGCGCTGATGACCCTGGTGACTGTCGTGCATCA
ACTGCTGTTGAAGAGGAGCTACCATGTCTCGCGCTGA

Upstream 100 bases:

>100_bases
ATGCCGCACCGAAGCAGACCGACATCTGCGGCACCGTCTGCGAGCTGCTCGGCGTGCCCCACGACAAACCTGTGTGCCGG
GAGTTGCTCAAGTGAACTCA

Downstream 100 bases:

>100_bases
ATCCGGCCCGGCCGGCGTCTACCACCGCGTCGTGGTCTACCTGCTGTTCGCCATCCTGCTGCTGCCGTTGCTGGGCACCT
TGATCTACTCGATCGCCAGC

Product: binding-protein dependent transport system inner membrane protein

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease; ABC Transporter; ABC Transporter Membrane Spanning Protein; Transmembrane Component Of ABC Transporter; ABC Transporter Membrane Component; Permease Of ABC Transporter; Permease Protein; Polyamine ABC Transporter Permease Protein; Acriflavin Resistance Protein; Permease; Ferrric Transport System Permease; Spermidine/Putrescine ABC Transporter; Sulfate ABC Transporter Permease Protein; ABC Transporter Inner Membrane Subunit; ABC Transporter Membrane Protein; Ferric Transport System Permease Protein; ABC-Type Transporter Permease Component; ABC Transport System Permease Protein; ABC-Type Transport System Permease Protein; ABC-Type Transport System Permease Component; ABC Trasnporter Integral Membrane Subunit; ABC Transporter, Permease Component Fragment; ABC Transporter Permease Component; ABC Transport System Membrane Protein; Spermidine/Putrescine ABC Transporter Permease Protein

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MTRGKWLAALCLVPFALFFIVFEIAPLIWVMINSLQSEEFGWGFANFSKIFNSKFYLQAIQYSLEISFWSSVFGIIIAVL
GAYSLRRVDSKLRNFVNAFANMTSNFAGVPLAFAFIILLGFNGSITIMLKQAGIIEDFNLYSKTGLIILYTYFQIPLGVL
LLYPAFDALREDWRESAALLGADSWQFWRHIGLPVLTPALLGTFVILLANALGAYATVYALTTGNFNVLPIRIAAMVSGD
ISLDPNLASALAVVLVALMTLVTVVHQLLLKRSYHVSR

Sequences:

>Translated_278_residues
MTRGKWLAALCLVPFALFFIVFEIAPLIWVMINSLQSEEFGWGFANFSKIFNSKFYLQAIQYSLEISFWSSVFGIIIAVL
GAYSLRRVDSKLRNFVNAFANMTSNFAGVPLAFAFIILLGFNGSITIMLKQAGIIEDFNLYSKTGLIILYTYFQIPLGVL
LLYPAFDALREDWRESAALLGADSWQFWRHIGLPVLTPALLGTFVILLANALGAYATVYALTTGNFNVLPIRIAAMVSGD
ISLDPNLASALAVVLVALMTLVTVVHQLLLKRSYHVSR
>Mature_277_residues
TRGKWLAALCLVPFALFFIVFEIAPLIWVMINSLQSEEFGWGFANFSKIFNSKFYLQAIQYSLEISFWSSVFGIIIAVLG
AYSLRRVDSKLRNFVNAFANMTSNFAGVPLAFAFIILLGFNGSITIMLKQAGIIEDFNLYSKTGLIILYTYFQIPLGVLL
LYPAFDALREDWRESAALLGADSWQFWRHIGLPVLTPALLGTFVILLANALGAYATVYALTTGNFNVLPIRIAAMVSGDI
SLDPNLASALAVVLVALMTLVTVVHQLLLKRSYHVSR

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: COG4132

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30855; Mature: 30724

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGKWLAALCLVPFALFFIVFEIAPLIWVMINSLQSEEFGWGFANFSKIFNSKFYLQAI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHH
QYSLEISFWSSVFGIIIAVLGAYSLRRVDSKLRNFVNAFANMTSNFAGVPLAFAFIILLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
FNGSITIMLKQAGIIEDFNLYSKTGLIILYTYFQIPLGVLLLYPAFDALREDWRESAALL
CCCCEEEEEECCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GADSWQFWRHIGLPVLTPALLGTFVILLANALGAYATVYALTTGNFNVLPIRIAAMVSGD
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEHEEEEEEECCC
ISLDPNLASALAVVLVALMTLVTVVHQLLLKRSYHVSR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRGKWLAALCLVPFALFFIVFEIAPLIWVMINSLQSEEFGWGFANFSKIFNSKFYLQAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHH
QYSLEISFWSSVFGIIIAVLGAYSLRRVDSKLRNFVNAFANMTSNFAGVPLAFAFIILLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
FNGSITIMLKQAGIIEDFNLYSKTGLIILYTYFQIPLGVLLLYPAFDALREDWRESAALL
CCCCEEEEEECCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GADSWQFWRHIGLPVLTPALLGTFVILLANALGAYATVYALTTGNFNVLPIRIAAMVSGD
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEHEEEEEEECCC
ISLDPNLASALAVVLVALMTLVTVVHQLLLKRSYHVSR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA