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The map label for this gene is ydhO [H]

Identifier: 77457865

GI number: 77457865

Start: 1829396

End: 1829932

Strand: Direct

Name: ydhO [H]

Synonym: Pfl01_1638

Alternate gene names: 77457865

Gene position: 1829396-1829932 (Clockwise)

Preceding gene: 77457864

Following gene: 77457868

Centisome position: 28.41

GC content: 64.06

Gene sequence:

>537_bases
ATGACGATGTCGGCCCGCTTTGCCCTGATGTTCTTCGCAGCGCTGCTCAGCGCCTGCGCCAGCCGCACTCCGCCGCCTGC
GCCGGTGGTTCGCGCTCCGATCGTGTTCGGATCCTCCCAGGCCTTTTCACCCGCTGCCGAAGACGTGCTGTTTCGCGCGC
TCGGGCTGGTGGGTACGCCCTATCGTTGGGGTGGCAATACGCCGGATTCGGGCTTCGATTGCAGTGGCCTGATCGGTTTT
GTCTACCGCGATGCCGCCGGCATCAGCCTGCCGCGCTCGACCCGCGAGATGATCGTCATGCAGGCGCCGAATGTCGGCAA
GGAAGGGCTGCAGACTGGCGACCTGATCTTCTTCGCCACCAATGGCGGCTCACAGGTCAGTCATGCGGGGATCTATGTCG
GGGAAGGGCGCTTCGTTCATGCGCCCGCCACCGGCGGCACGGTGAAGCTGGACAGCCTGTCGAAAGCGTATTGGCAGAAA
GCCTATCTGAGCGCCAAGCGCGTTCTGCAGCCAGAGCATCTGGCGCATAACCCGTAG

Upstream 100 bases:

>100_bases
GATCTATATTGATGGCAAACCGCCTGCGTCCCAACGCAGGCGGTTTTGTTTTCTATCGAATCGGCAGTCAAAGCCGCAGC
CAGATCAGGATGTTCTGCAA

Downstream 100 bases:

>100_bases
TCCAGATACATAAAAACCCGTGGCAGCTGAATGGCTCCCACGGGTTTTTTATGCCTGCAATAGATTAACGGGTCGCTGAA
ACCCGCCACACCTTGTTCCC

Product: NLP/P60

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTMSARFALMFFAALLSACASRTPPPAPVVRAPIVFGSSQAFSPAAEDVLFRALGLVGTPYRWGGNTPDSGFDCSGLIGF
VYRDAAGISLPRSTREMIVMQAPNVGKEGLQTGDLIFFATNGGSQVSHAGIYVGEGRFVHAPATGGTVKLDSLSKAYWQK
AYLSAKRVLQPEHLAHNP

Sequences:

>Translated_178_residues
MTMSARFALMFFAALLSACASRTPPPAPVVRAPIVFGSSQAFSPAAEDVLFRALGLVGTPYRWGGNTPDSGFDCSGLIGF
VYRDAAGISLPRSTREMIVMQAPNVGKEGLQTGDLIFFATNGGSQVSHAGIYVGEGRFVHAPATGGTVKLDSLSKAYWQK
AYLSAKRVLQPEHLAHNP
>Mature_177_residues
TMSARFALMFFAALLSACASRTPPPAPVVRAPIVFGSSQAFSPAAEDVLFRALGLVGTPYRWGGNTPDSGFDCSGLIGFV
YRDAAGISLPRSTREMIVMQAPNVGKEGLQTGDLIFFATNGGSQVSHAGIYVGEGRFVHAPATGGTVKLDSLSKAYWQKA
YLSAKRVLQPEHLAHNP

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=132, Percent_Identity=40.9090909090909, Blast_Score=131, Evalue=3e-32,
Organism=Escherichia coli, GI1786421, Length=138, Percent_Identity=37.6811594202899, Blast_Score=113, Evalue=6e-27,
Organism=Escherichia coli, GI1788501, Length=173, Percent_Identity=36.4161849710983, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1788001, Length=111, Percent_Identity=39.6396396396396, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 18863; Mature: 18732

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSARFALMFFAALLSACASRTPPPAPVVRAPIVFGSSQAFSPAAEDVLFRALGLVGTP
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEECCCCCCCHHHHHHHHHHHHHCCCC
YRWGGNTPDSGFDCSGLIGFVYRDAAGISLPRSTREMIVMQAPNVGKEGLQTGDLIFFAT
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEE
NGGSQVSHAGIYVGEGRFVHAPATGGTVKLDSLSKAYWQKAYLSAKRVLQPEHLAHNP
CCCCCCEECEEEEECCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHCCCC
>Mature Secondary Structure 
TMSARFALMFFAALLSACASRTPPPAPVVRAPIVFGSSQAFSPAAEDVLFRALGLVGTP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEECCCCCCCHHHHHHHHHHHHHCCCC
YRWGGNTPDSGFDCSGLIGFVYRDAAGISLPRSTREMIVMQAPNVGKEGLQTGDLIFFAT
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEE
NGGSQVSHAGIYVGEGRFVHAPATGGTVKLDSLSKAYWQKAYLSAKRVLQPEHLAHNP
CCCCCCEECEEEEECCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]