Click here to switch to the map view.

The map label for this gene is spr [H]

Identifier: 77457864

GI number: 77457864

Start: 1828496

End: 1829176

Strand: Direct

Name: spr [H]

Synonym: Pfl01_1637

Alternate gene names: 77457864

Gene position: 1828496-1829176 (Clockwise)

Preceding gene: 77457863

Following gene: 77457865

Centisome position: 28.4

GC content: 57.71

Gene sequence:

>681_bases
ATGAGGCTGATAGCGGGCATAGTCTCGGCTTCTTTACAACTATCAGCCACGGTCGTGCCCATGCTAAAGCGCTTCGCACC
CCTCGTGCCTCTCGCACTCGTCACCCTGTTGTTCGGTTGCGCTGCTCATTCACCTGTTAATCAAGAGCAGCAACAACAGG
TTAAAAATTCTGCCACCGCACAGTCTTCCGTTATTTACCAGGAAGAGCTGGACACCGAAAAAGAACTCGCCGACTTCAAC
GGCAAGAAGCCTTACCAGCTTCCGGTTCTGGCTGACAGCATCCTCGAACGCGGCATGTCCCTGATCGGTACCCGTTACCG
TTTCGGCGGTACCTCTGAAGCCGGTTTCGATTGCAGCGGTTTCATCGGCTACCTGTTCCGCGAAGAAGCGGGCATGAACC
TGCCGCGCTCCACCCGCGAAATGATCAACGTTGATGCGCCGCTGGTTTCGCGCAGCAACCTCGAGCCGGGCGACCTGCTG
TTCTTCGCCACCAATGGTCGTCGCGGTCGTGTCAGCCACGCCGGGATCTACCTGGGCGACAACCAGTTCATCCATTCCAG
CTCTCGTCGCAGCGGCGGTGTTCGCATCGACAGCCTGGGCGACAGCTACTGGAGCAAGACCTTCATCGAAGCCAAACGCG
CTTTGGCGAACGCTCCGACCGTGGTTACTGCTCGCAAGTAA

Upstream 100 bases:

>100_bases
CCTGTGGGTTGCACAGGCCGCGTCTCCATTCAAATAGGCTTAAGCGCTTAGATGTTACCGAGAAACCGGGAAGTCACAAA
AAGATCGATTGAATTTGCAA

Downstream 100 bases:

>100_bases
TCACTCGATTGTCGCTACGCTCGTGGCGACAAAGCGGCCCTTCTGACGCAATAGACCTAAACTTTACAAGGTGAAGTTAA
AGTCTTACTTGAAGTTTGCC

Product: NLP/P60

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRLIAGIVSASLQLSATVVPMLKRFAPLVPLALVTLLFGCAAHSPVNQEQQQQVKNSATAQSSVIYQEELDTEKELADFN
GKKPYQLPVLADSILERGMSLIGTRYRFGGTSEAGFDCSGFIGYLFREEAGMNLPRSTREMINVDAPLVSRSNLEPGDLL
FFATNGRRGRVSHAGIYLGDNQFIHSSSRRSGGVRIDSLGDSYWSKTFIEAKRALANAPTVVTARK

Sequences:

>Translated_226_residues
MRLIAGIVSASLQLSATVVPMLKRFAPLVPLALVTLLFGCAAHSPVNQEQQQQVKNSATAQSSVIYQEELDTEKELADFN
GKKPYQLPVLADSILERGMSLIGTRYRFGGTSEAGFDCSGFIGYLFREEAGMNLPRSTREMINVDAPLVSRSNLEPGDLL
FFATNGRRGRVSHAGIYLGDNQFIHSSSRRSGGVRIDSLGDSYWSKTFIEAKRALANAPTVVTARK
>Mature_226_residues
MRLIAGIVSASLQLSATVVPMLKRFAPLVPLALVTLLFGCAAHSPVNQEQQQQVKNSATAQSSVIYQEELDTEKELADFN
GKKPYQLPVLADSILERGMSLIGTRYRFGGTSEAGFDCSGFIGYLFREEAGMNLPRSTREMINVDAPLVSRSNLEPGDLL
FFATNGRRGRVSHAGIYLGDNQFIHSSSRRSGGVRIDSLGDSYWSKTFIEAKRALANAPTVVTARK

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=200, Percent_Identity=35, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1787944, Length=142, Percent_Identity=37.3239436619718, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1788001, Length=131, Percent_Identity=40.4580152671756, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786421, Length=132, Percent_Identity=36.3636363636364, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 24673; Mature: 24673

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIAGIVSASLQLSATVVPMLKRFAPLVPLALVTLLFGCAAHSPVNQEQQQQVKNSATA
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
QSSVIYQEELDTEKELADFNGKKPYQLPVLADSILERGMSLIGTRYRFGGTSEAGFDCSG
HHHHHHHHHCCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHH
FIGYLFREEAGMNLPRSTREMINVDAPLVSRSNLEPGDLLFFATNGRRGRVSHAGIYLGD
HHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECEEEECC
NQFIHSSSRRSGGVRIDSLGDSYWSKTFIEAKRALANAPTVVTARK
CCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure
MRLIAGIVSASLQLSATVVPMLKRFAPLVPLALVTLLFGCAAHSPVNQEQQQQVKNSATA
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
QSSVIYQEELDTEKELADFNGKKPYQLPVLADSILERGMSLIGTRYRFGGTSEAGFDCSG
HHHHHHHHHCCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHH
FIGYLFREEAGMNLPRSTREMINVDAPLVSRSNLEPGDLLFFATNGRRGRVSHAGIYLGD
HHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECEEEECC
NQFIHSSSRRSGGVRIDSLGDSYWSKTFIEAKRALANAPTVVTARK
CCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]