| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457851
Identifier: 77457851
GI number: 77457851
Start: 1814806
End: 1815258
Strand: Direct
Name: 77457851
Synonym: Pfl01_1624
Alternate gene names: NA
Gene position: 1814806-1815258 (Clockwise)
Preceding gene: 77457850
Following gene: 77457852
Centisome position: 28.19
GC content: 59.38
Gene sequence:
>453_bases ATGAGCGACGATTTCAAGCAGCAACTGCAAGAGGCACACGCAAAGGGTGACTATGCGCCGCTGCTGAAGCTGATTCCCTA TGCCGGGCTGATTGGTGTCGAGTGTTCGCGGGTCGGTGATGACTTGCTGTTCAAACTGCCCGCGAACAAGGACAACATTG GTAACCCTTTATTGCCGGCGATTCATGGCGGGGTGATTGCCGGGTTCATGGAACTGTCCGCCGCTCTGCACCTGCTGATT TTCACTGGCGCGCCCGGTGTGCCGAAGATTATCGATTTCTCCCTCGATTACCTGCGGGCCGGGCAATTTCGCGACACCTG GGCCCGGTGTCAGGTCTGCCGCCAGGGCCGGCGGGTGGCCAACGTCGCGGTCACGGCCTGGCAAAGCACCGAAAGTGAAC CGATCGCGACCGCCCGCGCGCATTTCAAAATCGATGAGCCCTTGAAATCCTGA
Upstream 100 bases:
>100_bases CCGAGCAGCCGATTGCCCATGTCGTCGGCACCTTCATGCGCATGGGCAAAGGCCTTAAAGGCACGAAAGGCTTTGGTGGC GCGATCAAGGGAGAAAGCCC
Downstream 100 bases:
>100_bases AGCACGCCCCCAACTCACAGAACAACCCGCCGCCGACCGGCAAGGTCGCGGCCAATGCCATCTGATTGGAGTTTGATGAC CATGAGTGTGGAAACTCAAA
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Thioesterase Superfamily; Phenylacetic Acid Degradation-Like Protein; Thioesterase Family Protein Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSDDFKQQLQEAHAKGDYAPLLKLIPYAGLIGVECSRVGDDLLFKLPANKDNIGNPLLPAIHGGVIAGFMELSAALHLLI FTGAPGVPKIIDFSLDYLRAGQFRDTWARCQVCRQGRRVANVAVTAWQSTESEPIATARAHFKIDEPLKS
Sequences:
>Translated_150_residues MSDDFKQQLQEAHAKGDYAPLLKLIPYAGLIGVECSRVGDDLLFKLPANKDNIGNPLLPAIHGGVIAGFMELSAALHLLI FTGAPGVPKIIDFSLDYLRAGQFRDTWARCQVCRQGRRVANVAVTAWQSTESEPIATARAHFKIDEPLKS >Mature_149_residues SDDFKQQLQEAHAKGDYAPLLKLIPYAGLIGVECSRVGDDLLFKLPANKDNIGNPLLPAIHGGVIAGFMELSAALHLLIF TGAPGVPKIIDFSLDYLRAGQFRDTWARCQVCRQGRRVANVAVTAWQSTESEPIATARAHFKIDEPLKS
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16386; Mature: 16255
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDFKQQLQEAHAKGDYAPLLKLIPYAGLIGVECSRVGDDLLFKLPANKDNIGNPLLPA CCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHCCCHHHCCCCCEEECCCCCCCCCCCCHHH IHGGVIAGFMELSAALHLLIFTGAPGVPKIIDFSLDYLRAGQFRDTWARCQVCRQGRRVA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH NVAVTAWQSTESEPIATARAHFKIDEPLKS HHHEEEECCCCCCCCHHHHHCEECCCCCCC >Mature Secondary Structure SDDFKQQLQEAHAKGDYAPLLKLIPYAGLIGVECSRVGDDLLFKLPANKDNIGNPLLPA CHHHHHHHHHHHCCCCHHHHHHHHHCCCHHCCCHHHCCCCCEEECCCCCCCCCCCCHHH IHGGVIAGFMELSAALHLLIFTGAPGVPKIIDFSLDYLRAGQFRDTWARCQVCRQGRRVA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH NVAVTAWQSTESEPIATARAHFKIDEPLKS HHHEEEECCCCCCCCHHHHHCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA