| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is braZ [H]
Identifier: 77457846
GI number: 77457846
Start: 1811257
End: 1812570
Strand: Direct
Name: braZ [H]
Synonym: Pfl01_1619
Alternate gene names: 77457846
Gene position: 1811257-1812570 (Clockwise)
Preceding gene: 77457845
Following gene: 77457847
Centisome position: 28.13
GC content: 63.62
Gene sequence:
>1314_bases ATGAAAGTTTTGAAAGGTCAGGACATCCTGGCACTTGGCTTTATGACATTCGCCCTGTTCGTCGGGGCCGGCAACATCAT CTTCCCGCCTATCGTCGGTTTGCAGTCCGGGCCTAACGTCTGGATCGCGGCGCTGGGCTTCCTGATCACGGCAGTCGGTC TGCCGGTGGTCACCGTGGTTGCACTGGCCAAGGTCGGTGGCGCAATGGACGCCCTGAGCAGCCCGATCGGCAAGGTCGCC GGTGGCGTACTGGCTGCCGCGTGCTACCTGGCAGTCGGCCCGCTGTTCGCCACCCCGCGTACCGCGACCGTTTCCTTTGA AGTGGGTTTGGCGCCGCTGACCGGCGAGAGCCCGCTGGCACTGTTCCTCTACAGTTCGGTGTACTTCCTGCTGGTGTTCT TCATTTCGCTCTACCCTGGGCGTCTGCTGGACACCGTCGGTCGCTTCCTCGCACCCCTGAAGATCATTGCTCTGGCCGTG CTCGGCATCGCCGCATTCGCACTGCCGGCCGGTGACATCGGCGTGGCCACTCCGGAATACGTTGCGGCACCGTTCTCCCA AGGTTTCATCAATGGTTACCTGACCATGGATACCCTCGGCGCGCTGGTGTTCGGCATCGTCATCGTCAACGCGATCCGCT CCCGTGGCGTCGAGTCGCCGGCGCTGATCACCCGGTACGCGATCATCGCCGGGCTGATTGCCGGCGTCGGTCTGGCGCTG GTGTATGTCAGCCTGTTCCGTCTGGGTTCCGGCAGCCATGAAGTGGCCGCTGGCGCTACCAATGGCGCGGCGGTGCTGCA CGCTTACGTGCAACACACCTTCGGTTCGCTGGGTAGCGGTTTCCTTGCGGTGCTGATCTCGCTGGCCTGCCTGGTGACGG CGGTCGGTCTGACCTGCGCCTGTGCTGAGTACTTCAGCCGCGTGTTGCCACTGTCCTACAAGACACTGGTGATCATCCTG GCTGCATTCTCGCTGCTGGTATCCAACCTGGGCCTGACCAAGCTGATCGCGTTCTCGATCCCGGTGCTCACCGCGATCTA CCCGCCGTGCATCGTGCTGGTGGCCCTGAGCTTCTGCGCCGCGTTCTGGCATGAGCAGAGCCGCATCATGGGCCCGGTGA TGCTGGTGTCGTTCGTGTTCGGCACCATCGATGCGCTGAAAGGCGCCGGTCTGGCGGACTGGATGCCATCGCAACTGGCC CACCTGCCGCTCAGCGAGCAAGGTCTGGCGTGGCTGGTGCCGTGCGTGATGACCCTGGTGGTTGCCGTGGTTTGCGACCG CCTGCTGGGCAAGCGCGCCGAAGCACTCGCTTAA
Upstream 100 bases:
>100_bases CGCGCTAAACGGGTCAGTCTTATACGGATTGACAGCATTTCCCTAACCCCACAGGGAAATCCCCCTCTAAATTCCGATTC AGTAGTGTGGTATTTCCTTA
Downstream 100 bases:
>100_bases GATTGCCGGGTCGCCACAAGCGGCTGCCGAGCGATTAAACAGAAATGCCCCGTATCAATCGATACGGGGCATTTTTTATG GGCTTCAGGCAGTGTCTTTT
Product: branched chain amino acid ABC transporter carrier protein
Products: L-leucine [Cytoplasm]; L-valine [Cytoplasm]; Na (I) [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: LIV-III [H]
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQSGPNVWIAALGFLITAVGLPVVTVVALAKVGGAMDALSSPIGKVA GGVLAAACYLAVGPLFATPRTATVSFEVGLAPLTGESPLALFLYSSVYFLLVFFISLYPGRLLDTVGRFLAPLKIIALAV LGIAAFALPAGDIGVATPEYVAAPFSQGFINGYLTMDTLGALVFGIVIVNAIRSRGVESPALITRYAIIAGLIAGVGLAL VYVSLFRLGSGSHEVAAGATNGAAVLHAYVQHTFGSLGSGFLAVLISLACLVTAVGLTCACAEYFSRVLPLSYKTLVIIL AAFSLLVSNLGLTKLIAFSIPVLTAIYPPCIVLVALSFCAAFWHEQSRIMGPVMLVSFVFGTIDALKGAGLADWMPSQLA HLPLSEQGLAWLVPCVMTLVVAVVCDRLLGKRAEALA
Sequences:
>Translated_437_residues MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQSGPNVWIAALGFLITAVGLPVVTVVALAKVGGAMDALSSPIGKVA GGVLAAACYLAVGPLFATPRTATVSFEVGLAPLTGESPLALFLYSSVYFLLVFFISLYPGRLLDTVGRFLAPLKIIALAV LGIAAFALPAGDIGVATPEYVAAPFSQGFINGYLTMDTLGALVFGIVIVNAIRSRGVESPALITRYAIIAGLIAGVGLAL VYVSLFRLGSGSHEVAAGATNGAAVLHAYVQHTFGSLGSGFLAVLISLACLVTAVGLTCACAEYFSRVLPLSYKTLVIIL AAFSLLVSNLGLTKLIAFSIPVLTAIYPPCIVLVALSFCAAFWHEQSRIMGPVMLVSFVFGTIDALKGAGLADWMPSQLA HLPLSEQGLAWLVPCVMTLVVAVVCDRLLGKRAEALA >Mature_437_residues MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQSGPNVWIAALGFLITAVGLPVVTVVALAKVGGAMDALSSPIGKVA GGVLAAACYLAVGPLFATPRTATVSFEVGLAPLTGESPLALFLYSSVYFLLVFFISLYPGRLLDTVGRFLAPLKIIALAV LGIAAFALPAGDIGVATPEYVAAPFSQGFINGYLTMDTLGALVFGIVIVNAIRSRGVESPALITRYAIIAGLIAGVGLAL VYVSLFRLGSGSHEVAAGATNGAAVLHAYVQHTFGSLGSGFLAVLISLACLVTAVGLTCACAEYFSRVLPLSYKTLVIIL AAFSLLVSNLGLTKLIAFSIPVLTAIYPPCIVLVALSFCAAFWHEQSRIMGPVMLVSFVFGTIDALKGAGLADWMPSQLA HLPLSEQGLAWLVPCVMTLVVAVVCDRLLGKRAEALA
Specific function: Component of the LIV-III transport system for branched- chain amino acids. BraZ is specific for isoleucine and valine. The LIV-III transport system may be H(+)-coupled [H]
COG id: COG1114
COG function: function code E; Branched-chain amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the branched chain amino acid transporter family [H]
Homologues:
Organism=Escherichia coli, GI1786601, Length=434, Percent_Identity=66.3594470046083, Blast_Score=575, Evalue=1e-165,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004685 [H]
Pfam domain/function: PF05525 Branch_AA_trans [H]
EC number: NA
Molecular weight: Translated: 45175; Mature: 45175
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQSGPNVWIAALGFLITAVGLPVVTVV CCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALAKVGGAMDALSSPIGKVAGGVLAAACYLAVGPLFATPRTATVSFEVGLAPLTGESPLA HHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHH LFLYSSVYFLLVFFISLYPGRLLDTVGRFLAPLKIIALAVLGIAAFALPAGDIGVATPEY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH VAAPFSQGFINGYLTMDTLGALVFGIVIVNAIRSRGVESPALITRYAIIAGLIAGVGLAL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VYVSLFRLGSGSHEVAAGATNGAAVLHAYVQHTFGSLGSGFLAVLISLACLVTAVGLTCA HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH CAEYFSRVLPLSYKTLVIILAAFSLLVSNLGLTKLIAFSIPVLTAIYPPCIVLVALSFCA HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFWHEQSRIMGPVMLVSFVFGTIDALKGAGLADWMPSQLAHLPLSEQGLAWLVPCVMTLV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHCCCCCCCCHHHHHHHHHHHH VAVVCDRLLGKRAEALA HHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQSGPNVWIAALGFLITAVGLPVVTVV CCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALAKVGGAMDALSSPIGKVAGGVLAAACYLAVGPLFATPRTATVSFEVGLAPLTGESPLA HHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHH LFLYSSVYFLLVFFISLYPGRLLDTVGRFLAPLKIIALAVLGIAAFALPAGDIGVATPEY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH VAAPFSQGFINGYLTMDTLGALVFGIVIVNAIRSRGVESPALITRYAIIAGLIAGVGLAL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VYVSLFRLGSGSHEVAAGATNGAAVLHAYVQHTFGSLGSGFLAVLISLACLVTAVGLTCA HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH CAEYFSRVLPLSYKTLVIILAAFSLLVSNLGLTKLIAFSIPVLTAIYPPCIVLVALSFCA HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFWHEQSRIMGPVMLVSFVFGTIDALKGAGLADWMPSQLAHLPLSEQGLAWLVPCVMTLV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHCCCCCCCCHHHHHHHHHHHH VAVVCDRLLGKRAEALA HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-leucine [Periplasm]; L-valine [Periplasm]; Na (I) [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + L-leucine [Periplasm] = Na (I) [Cytoplasm] + L-leucine [Cytoplasm] Na (I) [Periplasm] + L-valine [Periplasm] = Na (I) [Cytoplasm] + L-valine [Cytoplasm] Na (I) [Periplasm] + L-iso-leucine [Periplasm] = Na (I) [Cytoplasm] + L-iso-leuci
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1900503; 10984043 [H]