Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77457826

Identifier: 77457826

GI number: 77457826

Start: 1786987

End: 1787427

Strand: Direct

Name: 77457826

Synonym: Pfl01_1599

Alternate gene names: NA

Gene position: 1786987-1787427 (Clockwise)

Preceding gene: 77457817

Following gene: 77457828

Centisome position: 27.76

GC content: 66.89

Gene sequence:

>441_bases
ATGAGCGCTTTAACCTTGAAAGTCGCAGTCAAGCTGGTCAACGAAGCCATCAATGCAGGGCGGGCCATCTCCGCCGCGCC
GCTGACCATCGCGGTACTGGATACCGGCGGCCATCTGGTCACCTTGCAACGCGAAGACGGCGCCAGCCTGCTGCGCCCGA
ACATCGCCATCGGCAAAGCCTGGGGCGCCATCGCCCTGGGCAAGGGCTCACGCCTGCTGGCGCTGGACGCGCAACAACGC
CCGGCGTTCATCGCCGCGCTCAACAGCATGGGGCAGGGCAGCGTCGTGCCGGCACCGGGTGGTGTGCTGATTCGGGATCA
GGCGGGGAACGTGCTGGGTGCGATCGGCATCAGCGGCGATCTGTCGGACATCGATGAGCAGGTGGCAATCAAGGCCGTGG
AGGCTCTGGACCTGCGGGCGGATGCGGGGGTGGCGGCCTGA

Upstream 100 bases:

>100_bases
TATACAAAAAAATAATTCATTGTGTTCTATTTGTTGCATCTGGCTGCGGCAGAAAAGCGCAGCCCAACGACTTTCCCAAT
AACAAAATGAGGACGGCACC

Downstream 100 bases:

>100_bases
GTGGCTAAAACCGGATAGTCGCTGAAACGCACAAGCCCGCCCTCACAGGATGATGTGAGGGCGGGCTTGTTTGTGTCTGG
AGGGCGGTCTTCAGTCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Glcg Protein; Conserved Domain Protein

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSALTLKVAVKLVNEAINAGRAISAAPLTIAVLDTGGHLVTLQREDGASLLRPNIAIGKAWGAIALGKGSRLLALDAQQR
PAFIAALNSMGQGSVVPAPGGVLIRDQAGNVLGAIGISGDLSDIDEQVAIKAVEALDLRADAGVAA

Sequences:

>Translated_146_residues
MSALTLKVAVKLVNEAINAGRAISAAPLTIAVLDTGGHLVTLQREDGASLLRPNIAIGKAWGAIALGKGSRLLALDAQQR
PAFIAALNSMGQGSVVPAPGGVLIRDQAGNVLGAIGISGDLSDIDEQVAIKAVEALDLRADAGVAA
>Mature_145_residues
SALTLKVAVKLVNEAINAGRAISAAPLTIAVLDTGGHLVTLQREDGASLLRPNIAIGKAWGAIALGKGSRLLALDAQQRP
AFIAALNSMGQGSVVPAPGGVLIRDQAGNVLGAIGISGDLSDIDEQVAIKAVEALDLRADAGVAA

Specific function: Unknown

COG id: COG3193

COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14621; Mature: 14490

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALTLKVAVKLVNEAINAGRAISAAPLTIAVLDTGGHLVTLQREDGASLLRPNIAIGKA
CCEEHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEECCCCCCCCCCCEEEECC
WGAIALGKGSRLLALDAQQRPAFIAALNSMGQGSVVPAPGGVLIRDQAGNVLGAIGISGD
CCEEEECCCCEEEEECCCCCCEEEEEECCCCCCCEEECCCCEEEEECCCCEEEEEECCCC
LSDIDEQVAIKAVEALDLRADAGVAA
HHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SALTLKVAVKLVNEAINAGRAISAAPLTIAVLDTGGHLVTLQREDGASLLRPNIAIGKA
CEEHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEECCCCCCCCCCCEEEECC
WGAIALGKGSRLLALDAQQRPAFIAALNSMGQGSVVPAPGGVLIRDQAGNVLGAIGISGD
CCEEEECCCCEEEEECCCCCCEEEEEECCCCCCCEEECCCCEEEEECCCCEEEEEECCCC
LSDIDEQVAIKAVEALDLRADAGVAA
HHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA