Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is yedI [H]

Identifier: 77457828

GI number: 77457828

Start: 1788258

End: 1789172

Strand: Direct

Name: yedI [H]

Synonym: Pfl01_1601

Alternate gene names: 77457828

Gene position: 1788258-1789172 (Clockwise)

Preceding gene: 77457826

Following gene: 77457831

Centisome position: 27.77

GC content: 61.53

Gene sequence:

>915_bases
ATGGCAGGAAGCAGTTTGCTGGTGCTGATCGACGACATCGCCACCGTTCTGGACGACGTTGCGTTGATGACCAAAATGGC
TGCCAAGAAGACCGCCGGCGTGCTCGGCGACGACTTGGCGCTCAATGCCCAGCAGGTCTCGGGCGTACGCGCGGAGCGGG
AAATCCCCGTCGTTTGGGCGGTGGCCAAGGGCTCGTTCGTCAACAAACTGATTCTGGTGCCGTCGGCGCTGGCGATCAGT
GCGTTCGTGCCGTGGCTGGTGACGCCACTGTTGATGGTCGGTGGCGCCTACCTGTGTTTCGAAGGTTTCGAAAAACTCGC
GCACAAATTCCTGCACAGCAAGGCTGAAGACGAGGCCGAGCATGCGCAGTTGGTTGAAGCCGTGGCTGATCCGGCAACCG
ATCTGGTGGCGTACGAGAAGGACAAGATCAAGGGCGCGATCCGCACCGACTTTATCCTCTCGGCGGAAATTATCGCCATC
ACCCTCGGCACCGTGGCCGATGCTTCGCTGACCCAGCAAGTGATCGTGATGTCGGGCATCGCCATCGTCATGACCGTAGG
CGTTTACGGTCTGGTGGCCGGCATCGTCAAACTCGATGACCTCGGTCTGTGGCTGACCCAGAAGCCCGGGCAGATGGCCA
AAAGCATCGGCAACAGCATTCTGCGTGCGGCGCCGTACATGATGAAAAGCCTGTCGGTAATCGGCACTGCTGCGATGTTC
CTGGTCGGTGGCGGCATCCTGACCCACGGCGTGCCGGTGGTGCATCACTGGATCGAAAGCGTCGGCGCAGCGGCCGGTGG
CGCCGGGTTTGTGGTGCCGATGCTGTTGAACGGCGTGGCGGGGATCATCGCGGGTGCGGTGGTGCTGGCGGGCGTGTCCG
TGATCGGCAAAGTCTGGAAAGCCCTGAAAGGCTAA

Upstream 100 bases:

>100_bases
CGCATGGTAGCACCGGCCTCGCGCGGCGCTCAACAATGCCCCGTGTGGCCTGCAGTCGCGGTATGCTGCGCGGCATTATT
CACATAAGGAAACAAGATTC

Downstream 100 bases:

>100_bases
ATCCTGAAGCAAACAAAAAGGCCATTCGATTCGCATCGAATGGCCTTTTTTGTGGCTGGCATTTTTACTCGGCGATCTGC
AACTTGCGCGACTCGGTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MAGSSLLVLIDDIATVLDDVALMTKMAAKKTAGVLGDDLALNAQQVSGVRAEREIPVVWAVAKGSFVNKLILVPSALAIS
AFVPWLVTPLLMVGGAYLCFEGFEKLAHKFLHSKAEDEAEHAQLVEAVADPATDLVAYEKDKIKGAIRTDFILSAEIIAI
TLGTVADASLTQQVIVMSGIAIVMTVGVYGLVAGIVKLDDLGLWLTQKPGQMAKSIGNSILRAAPYMMKSLSVIGTAAMF
LVGGGILTHGVPVVHHWIESVGAAAGGAGFVVPMLLNGVAGIIAGAVVLAGVSVIGKVWKALKG

Sequences:

>Translated_304_residues
MAGSSLLVLIDDIATVLDDVALMTKMAAKKTAGVLGDDLALNAQQVSGVRAEREIPVVWAVAKGSFVNKLILVPSALAIS
AFVPWLVTPLLMVGGAYLCFEGFEKLAHKFLHSKAEDEAEHAQLVEAVADPATDLVAYEKDKIKGAIRTDFILSAEIIAI
TLGTVADASLTQQVIVMSGIAIVMTVGVYGLVAGIVKLDDLGLWLTQKPGQMAKSIGNSILRAAPYMMKSLSVIGTAAMF
LVGGGILTHGVPVVHHWIESVGAAAGGAGFVVPMLLNGVAGIIAGAVVLAGVSVIGKVWKALKG
>Mature_303_residues
AGSSLLVLIDDIATVLDDVALMTKMAAKKTAGVLGDDLALNAQQVSGVRAEREIPVVWAVAKGSFVNKLILVPSALAISA
FVPWLVTPLLMVGGAYLCFEGFEKLAHKFLHSKAEDEAEHAQLVEAVADPATDLVAYEKDKIKGAIRTDFILSAEIIAIT
LGTVADASLTQQVIVMSGIAIVMTVGVYGLVAGIVKLDDLGLWLTQKPGQMAKSIGNSILRAAPYMMKSLSVIGTAAMFL
VGGGILTHGVPVVHHWIESVGAAAGGAGFVVPMLLNGVAGIIAGAVVLAGVSVIGKVWKALKG

Specific function: Unknown

COG id: COG2354

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788268, Length=300, Percent_Identity=60.3333333333333, Blast_Score=351, Evalue=3e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008526 [H]

Pfam domain/function: PF05661 DUF808 [H]

EC number: NA

Molecular weight: Translated: 31430; Mature: 31298

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCC
>Mature Secondary Structure 
AGSSLLVLIDDIATVLDDVALMTKMAAKKTAGVLGDDLALNAQQVSGVRAEREIPVVWA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHCCCCCCCCCEEEE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HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]