Click here to switch to the map view.

The map label for this gene is ydeR [H]

Identifier: 77457816

GI number: 77457816

Start: 1775163

End: 1776350

Strand: Reverse

Name: ydeR [H]

Synonym: Pfl01_1589

Alternate gene names: 77457816

Gene position: 1776350-1775163 (Counterclockwise)

Preceding gene: 77457818

Following gene: 77457803

Centisome position: 27.59

GC content: 63.8

Gene sequence:

>1188_bases
ATGACCGCCACAACTCACGCAATGACCCGAGGCATGGTGCTGCTGTTCGCTTTCTGCTGCGGCGCCATCGTTGCCAACAT
CTACTACGCCCAGCCGATCATCGGCCTGATCGCGCCGGACATCGGCCTGAGCGACACCATGGCCAGTTTCATCGTGTCGC
TGACCCAGATCGGCTATGCGCTGGGCCTGTTCTTTCTGGTGCCGCTGGCGGATCTGCTGGAAAACCGCCGTCTGATGATC
ATCACCACCGTGGTGGCAATTGCCAGCCTGCTGGGTGCGGCGTTTACCGATCAACCGAATGTGTTCCTGCTAATTTCGTT
GCTGGTGGGCTTCAGCTCGGTGTCGGTGCAGGTGCTGATTCCATTGGCGGCGCATCTGGCGCCGGAAGAATCCCGTGGCC
GGGTGGTCGGCGGGATCATGGGCGGTCTGCTGCTGGGGATTCTGCTGGCGCGGCCAGTGTCGAGCGTGGTCGCCGACCAC
CTCGGCTGGCGGGCGATGTTCATGATCGCGGCAGGCTTGATGGCCGCGATCAGCGTGGTTTTGGCGCTGACTGTGCCCAA
GCGCCAGCCGGATCACAGCGCCTCCTACGGCCAATTACTCGGATCGTTGTGGACGCTGCTGCGCAAACAACCGGTGCTGC
GTCAGCGCGCGTTCTACCAGGCCTGCATGTTCGCCACGTTCAGCCTGTTCTGGACTGCCGTGCCGCTGGAACTGGCGCGC
AACCATGGCCTGTCCCAGAGTGAAATCGCGATCTTCGCCCTGGTCGGCGCCATCGGTGCCATCGCCGCTCCGATCAGCGG
ACGTCTGGCCGACGCCGGCCACACCCGCATCGCTTCGTTGCTGGCCATGCTGTTCGCCAGCCTGAGCTTCCTGCCCGCCT
TCATCCACCCGGCCTACAGCGTGATCGGCCTGGCCGTGACCGGTGTGGTGCTCGACTTCTGCGTACAGATGAACATGGTG
CTCGGCCAGCGCGCGGTCTACTCCCTCGACGCCAAAAGCCGCGGCCGCCTCAACGCGCTGTACATGACCAGCATCTTCGT
CGGCGGCGCCTTCGGCTCGTCGGTGGCCAGTGCGGTATACGAGCATGGTGGCTGGTTGTGGATCGTGATTGTCGGCAGCG
CGTTCCCGCTGCTGGCGCTGGTGCGGTTTTTGAGTGCTTCGCAGAAGCCTGTTCTGGCAACGGCCTAG

Upstream 100 bases:

>100_bases
TTCCGCAACGGAATAACTGATATCGATCAGAAGCCTCTACTGCCGGCTCGGCCCGTCCCTTAGCCTCACCGCATTCCTTT
TCGCTGGATCGAGAAACCCT

Downstream 100 bases:

>100_bases
AATCTGAAAGCACTGCCGGATCGCTGATCCGACAGTCCCTGATGCTCAATGCCGGACCAGTTTTTCCATGGCGGCATCCG
CCAGAAAGGAAGAGCGGCTC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MTATTHAMTRGMVLLFAFCCGAIVANIYYAQPIIGLIAPDIGLSDTMASFIVSLTQIGYALGLFFLVPLADLLENRRLMI
ITTVVAIASLLGAAFTDQPNVFLLISLLVGFSSVSVQVLIPLAAHLAPEESRGRVVGGIMGGLLLGILLARPVSSVVADH
LGWRAMFMIAAGLMAAISVVLALTVPKRQPDHSASYGQLLGSLWTLLRKQPVLRQRAFYQACMFATFSLFWTAVPLELAR
NHGLSQSEIAIFALVGAIGAIAAPISGRLADAGHTRIASLLAMLFASLSFLPAFIHPAYSVIGLAVTGVVLDFCVQMNMV
LGQRAVYSLDAKSRGRLNALYMTSIFVGGAFGSSVASAVYEHGGWLWIVIVGSAFPLLALVRFLSASQKPVLATA

Sequences:

>Translated_395_residues
MTATTHAMTRGMVLLFAFCCGAIVANIYYAQPIIGLIAPDIGLSDTMASFIVSLTQIGYALGLFFLVPLADLLENRRLMI
ITTVVAIASLLGAAFTDQPNVFLLISLLVGFSSVSVQVLIPLAAHLAPEESRGRVVGGIMGGLLLGILLARPVSSVVADH
LGWRAMFMIAAGLMAAISVVLALTVPKRQPDHSASYGQLLGSLWTLLRKQPVLRQRAFYQACMFATFSLFWTAVPLELAR
NHGLSQSEIAIFALVGAIGAIAAPISGRLADAGHTRIASLLAMLFASLSFLPAFIHPAYSVIGLAVTGVVLDFCVQMNMV
LGQRAVYSLDAKSRGRLNALYMTSIFVGGAFGSSVASAVYEHGGWLWIVIVGSAFPLLALVRFLSASQKPVLATA
>Mature_394_residues
TATTHAMTRGMVLLFAFCCGAIVANIYYAQPIIGLIAPDIGLSDTMASFIVSLTQIGYALGLFFLVPLADLLENRRLMII
TTVVAIASLLGAAFTDQPNVFLLISLLVGFSSVSVQVLIPLAAHLAPEESRGRVVGGIMGGLLLGILLARPVSSVVADHL
GWRAMFMIAAGLMAAISVVLALTVPKRQPDHSASYGQLLGSLWTLLRKQPVLRQRAFYQACMFATFSLFWTAVPLELARN
HGLSQSEIAIFALVGAIGAIAAPISGRLADAGHTRIASLLAMLFASLSFLPAFIHPAYSVIGLAVTGVVLDFCVQMNMVL
GQRAVYSLDAKSRGRLNALYMTSIFVGGAFGSSVASAVYEHGGWLWIVIVGSAFPLLALVRFLSASQKPVLATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41823; Mature: 41692

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TATTHAMTRGMVLLFAFCCGAIVANIYYAQPIIGLIAPDIGLSDTMASFIVSLTQIGYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LGLFFLVPLADLLENRRLMIITTVVAIASLLGAAFTDQPNVFLLISLLVGFSSVSVQVLI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH
PLAAHLAPEESRGRVVGGIMGGLLLGILLARPVSSVVADHLGWRAMFMIAAGLMAAISVV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALTVPKRQPDHSASYGQLLGSLWTLLRKQPVLRQRAFYQACMFATFSLFWTAVPLELAR
HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NHGLSQSEIAIFALVGAIGAIAAPISGRLADAGHTRIASLLAMLFASLSFLPAFIHPAYS
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIGLAVTGVVLDFCVQMNMVLGQRAVYSLDAKSRGRLNALYMTSIFVGGAFGSSVASAVY
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH
EHGGWLWIVIVGSAFPLLALVRFLSASQKPVLATA
HCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]