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The map label for this gene is ccmH [H]

Identifier: 77457811

GI number: 77457811

Start: 1772164

End: 1772634

Strand: Direct

Name: ccmH [H]

Synonym: Pfl01_1584

Alternate gene names: 77457811

Gene position: 1772164-1772634 (Clockwise)

Preceding gene: 77457810

Following gene: 77457812

Centisome position: 27.52

GC content: 61.15

Gene sequence:

>471_bases
ATGAAGCGCTTTTTAGCGGCCATGGTGCTGGGCTTGAGCCTGGCCGGTGTGGCCCACGCCGCCATCGACACCTACGAGTT
CGCCAAAGAAGGCGATCGCGAGCGTTTCCGCGAGCTGACCAAGGAACTGCGCTGCCCCAAGTGCCAGAACCAGGACATCG
CCGATTCCAACGCACCGATTGCCGCCGACCTGCGCAAAGAGATTTTCCGCATGCTCGGCGAGGGCAAGGACAATCAGCAG
ATCATCGACTTCATGGTCGATCGCTACGGTGATTTCGTCCGCTACAAACCGGCGCTCAATGCCAAGACCGCTTTGCTCTG
GTTCGGCCCGGCCGGTCTGCTGCTGGGTGGGTTCGTGGTGATTGCCGTGATCGTCCGCCGCCGTCGCGGGCAACGCGCCG
AGACGCCGCAATCGCTGTCCCCTGAAGAGCGTCAGCGCCTCGACCAACTGTTGGATAAAAACCAAGAATGA

Upstream 100 bases:

>100_bases
AGGGCATCATCCGCGACAAGTACGTCGGCGTGATCGACGAGCAGGTCTGGCGGGAAAAACTGGCGGCCAAGTATCAGGCA
CTGGTTGACGAGGCCAAGCC

Downstream 100 bases:

>100_bases
TTGATTTCTGGCTTGCCGCAGGGCTGTTGCTTCTGGTCGCCCTGAGTTTTCTGCTGATCCCTGTCCTGCGCGAACGTCGC
GCCCAGCGTGAAGAGGATCG

Product: diaminohydroxyphosphoribosylaminopyrimidine deaminase

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycL [H]

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKRFLAAMVLGLSLAGVAHAAIDTYEFAKEGDRERFRELTKELRCPKCQNQDIADSNAPIAADLRKEIFRMLGEGKDNQQ
IIDFMVDRYGDFVRYKPALNAKTALLWFGPAGLLLGGFVVIAVIVRRRRGQRAETPQSLSPEERQRLDQLLDKNQE

Sequences:

>Translated_156_residues
MKRFLAAMVLGLSLAGVAHAAIDTYEFAKEGDRERFRELTKELRCPKCQNQDIADSNAPIAADLRKEIFRMLGEGKDNQQ
IIDFMVDRYGDFVRYKPALNAKTALLWFGPAGLLLGGFVVIAVIVRRRRGQRAETPQSLSPEERQRLDQLLDKNQE
>Mature_156_residues
MKRFLAAMVLGLSLAGVAHAAIDTYEFAKEGDRERFRELTKELRCPKCQNQDIADSNAPIAADLRKEIFRMLGEGKDNQQ
IIDFMVDRYGDFVRYKPALNAKTALLWFGPAGLLLGGFVVIAVIVRRRRGQRAETPQSLSPEERQRLDQLLDKNQE

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmH/CycL/Ccl2/NrfF family [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=141, Percent_Identity=46.8085106382979, Blast_Score=127, Evalue=3e-31,
Organism=Escherichia coli, GI1790512, Length=87, Percent_Identity=44.8275862068966, Blast_Score=96, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 17709; Mature: 17709

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFLAAMVLGLSLAGVAHAAIDTYEFAKEGDRERFRELTKELRCPKCQNQDIADSNAPI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCH
AADLRKEIFRMLGEGKDNQQIIDFMVDRYGDFVRYKPALNAKTALLWFGPAGLLLGGFVV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHH
IAVIVRRRRGQRAETPQSLSPEERQRLDQLLDKNQE
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRFLAAMVLGLSLAGVAHAAIDTYEFAKEGDRERFRELTKELRCPKCQNQDIADSNAPI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCH
AADLRKEIFRMLGEGKDNQQIIDFMVDRYGDFVRYKPALNAKTALLWFGPAGLLLGGFVV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHH
IAVIVRRRRGQRAETPQSLSPEERQRLDQLLDKNQE
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA