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The map label for this gene is cycH [H]

Identifier: 77457812

GI number: 77457812

Start: 1772631

End: 1773833

Strand: Direct

Name: cycH [H]

Synonym: Pfl01_1585

Alternate gene names: 77457812

Gene position: 1772631-1773833 (Clockwise)

Preceding gene: 77457811

Following gene: 77457813

Centisome position: 27.53

GC content: 64.42

Gene sequence:

>1203_bases
ATGATTGATTTCTGGCTTGCCGCAGGGCTGTTGCTTCTGGTCGCCCTGAGTTTTCTGCTGATCCCTGTCCTGCGCGAACG
TCGCGCCCAGCGTGAAGAGGATCGAACCGCTCTCAACGTCGCCCTGTATCAGGAACGCGTCGCCGAACTGCAATCGCAGC
AGGCCGAAGGCGTTCTCGACGCCGCACAAATGGACAGCGGCCGCGCCGAAGCCGCCCGTGAATTGCTGGCCGACACCGAA
GGCGTGGCGCCGGCGCGGGTTTCGCGTTTGGGCAAGCCTTTGCCATTGCTGGCAGCGGTGCTGGTGCCGGTGTTGGGCCT
CGGTCTGTACTTGCACTTTGGCGCGAGCGACAAGGTCGAACTGACCCGCGAGTTCGCCCAGGCGCCACAGTCGATGGAAG
AGATGACCCAACGTCTGGAGCGCGCAGTCGCAGCACAACCGGATTCGGCTGAAGGCGTGTATTTCCTCGGTCGTACCTAC
ATGGCCCAGGATCGCCCGGCGGACGCGGCGAAGATGTTCGAACGCGCGGTCAATCTCGCCGGTCGTCAGCCGGAACTGCT
CGGCCAGTGGGCGCAGGCCCAGTACTTTGCCGACAACAAAAAATGGTCGGACAAGGTTCAGGCTCTGACCGATGAAGCGC
TGAAAGCCGATCCGAAAGAAGTCACCAGTCTCGGCCTGCTGGGCATCGCCGCGTTCGAAGGCGAGCGTTATCAGGAAGCC
ATCGACTACTGGAACCGTCTGCTGGCGCAACTGCCGCCGCAGGACAAATCCCGCGAGGCCCTGCAGGGCGGCATCACCCG
CGCCACCGAAAAGCTGCAGGCCAGCGGCGGCAAGGTCGCCCAGGCACCGGCGGCGAAAGCGGCGGCGTTGTTGAAAGTGC
GTGTGGATCTGGCCAGCGAGCTCAAAGCCAAGGTGCAACCGGGCGATAGCGTGTTCATTTTTGCCCGGGCCACCTCGGGC
CCGCCGGCACCGCTGGCGGCCAAGCGCCTGACCGTCGCCGACCTGCCGGTGACCGTCGAACTGGGCGATGCCGACGCAAT
GATGCCGCAATTGAAACTGTCGAACTTCCCCGAAGTCCAACTGGTTGCGCGTATCTCCCGTGCCGGTCAGCCGACCGCCG
GTGAGTGGGTCGGTCGCAGCGGGCCTCTGCCCAGCAGCACCACCGCGCCGCAGACACTGACCATCGACAGCCCGGACAAA
TAG

Upstream 100 bases:

>100_bases
TGATCGTCCGCCGCCGTCGCGGGCAACGCGCCGAGACGCCGCAATCGCTGTCCCCTGAAGAGCGTCAGCGCCTCGACCAA
CTGTTGGATAAAAACCAAGA

Downstream 100 bases:

>100_bases
CCGGAACCAACAGGAAAGCACCGCCATGAACGTCATCGCCCGAATCACAGTCCTCACACTGGCCCTGGGCTTGAGCGCAT
GTGCGGTGCAACGACCGGAG

Product: cytochrome c-type biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MIDFWLAAGLLLLVALSFLLIPVLRERRAQREEDRTALNVALYQERVAELQSQQAEGVLDAAQMDSGRAEAARELLADTE
GVAPARVSRLGKPLPLLAAVLVPVLGLGLYLHFGASDKVELTREFAQAPQSMEEMTQRLERAVAAQPDSAEGVYFLGRTY
MAQDRPADAAKMFERAVNLAGRQPELLGQWAQAQYFADNKKWSDKVQALTDEALKADPKEVTSLGLLGIAAFEGERYQEA
IDYWNRLLAQLPPQDKSREALQGGITRATEKLQASGGKVAQAPAAKAAALLKVRVDLASELKAKVQPGDSVFIFARATSG
PPAPLAAKRLTVADLPVTVELGDADAMMPQLKLSNFPEVQLVARISRAGQPTAGEWVGRSGPLPSSTTAPQTLTIDSPDK

Sequences:

>Translated_400_residues
MIDFWLAAGLLLLVALSFLLIPVLRERRAQREEDRTALNVALYQERVAELQSQQAEGVLDAAQMDSGRAEAARELLADTE
GVAPARVSRLGKPLPLLAAVLVPVLGLGLYLHFGASDKVELTREFAQAPQSMEEMTQRLERAVAAQPDSAEGVYFLGRTY
MAQDRPADAAKMFERAVNLAGRQPELLGQWAQAQYFADNKKWSDKVQALTDEALKADPKEVTSLGLLGIAAFEGERYQEA
IDYWNRLLAQLPPQDKSREALQGGITRATEKLQASGGKVAQAPAAKAAALLKVRVDLASELKAKVQPGDSVFIFARATSG
PPAPLAAKRLTVADLPVTVELGDADAMMPQLKLSNFPEVQLVARISRAGQPTAGEWVGRSGPLPSSTTAPQTLTIDSPDK
>Mature_400_residues
MIDFWLAAGLLLLVALSFLLIPVLRERRAQREEDRTALNVALYQERVAELQSQQAEGVLDAAQMDSGRAEAARELLADTE
GVAPARVSRLGKPLPLLAAVLVPVLGLGLYLHFGASDKVELTREFAQAPQSMEEMTQRLERAVAAQPDSAEGVYFLGRTY
MAQDRPADAAKMFERAVNLAGRQPELLGQWAQAQYFADNKKWSDKVQALTDEALKADPKEVTSLGLLGIAAFEGERYQEA
IDYWNRLLAQLPPQDKSREALQGGITRATEKLQASGGKVAQAPAAKAAALLKVRVDLASELKAKVQPGDSVFIFARATSG
PPAPLAAKRLTVADLPVTVELGDADAMMPQLKLSNFPEVQLVARISRAGQPTAGEWVGRSGPLPSSTTAPQTLTIDSPDK

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017560
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43170; Mature: 43170

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFWLAAGLLLLVALSFLLIPVLRERRAQREEDRTALNVALYQERVAELQSQQAEGVLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AAQMDSGRAEAARELLADTEGVAPARVSRLGKPLPLLAAVLVPVLGLGLYLHFGASDKVE
HHHCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCHHH
LTREFAQAPQSMEEMTQRLERAVAAQPDSAEGVYFLGRTYMAQDRPADAAKMFERAVNLA
HHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCHHHHHHHHHHHHC
GRQPELLGQWAQAQYFADNKKWSDKVQALTDEALKADPKEVTSLGLLGIAAFEGERYQEA
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHH
IDYWNRLLAQLPPQDKSREALQGGITRATEKLQASGGKVAQAPAAKAAALLKVRVDLASE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LKAKVQPGDSVFIFARATSGPPAPLAAKRLTVADLPVTVELGDADAMMPQLKLSNFPEVQ
HHHHCCCCCEEEEEEEECCCCCCCHHHCCEEEECCCEEEEECCCHHHHHHHHCCCCCHHH
LVARISRAGQPTAGEWVGRSGPLPSSTTAPQTLTIDSPDK
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MIDFWLAAGLLLLVALSFLLIPVLRERRAQREEDRTALNVALYQERVAELQSQQAEGVLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AAQMDSGRAEAARELLADTEGVAPARVSRLGKPLPLLAAVLVPVLGLGLYLHFGASDKVE
HHHCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCHHH
LTREFAQAPQSMEEMTQRLERAVAAQPDSAEGVYFLGRTYMAQDRPADAAKMFERAVNLA
HHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCCCCHHHHHHHHHHHHC
GRQPELLGQWAQAQYFADNKKWSDKVQALTDEALKADPKEVTSLGLLGIAAFEGERYQEA
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHH
IDYWNRLLAQLPPQDKSREALQGGITRATEKLQASGGKVAQAPAAKAAALLKVRVDLASE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
LKAKVQPGDSVFIFARATSGPPAPLAAKRLTVADLPVTVELGDADAMMPQLKLSNFPEVQ
HHHHCCCCCEEEEEEEECCCCCCCHHHCCEEEECCCEEEEECCCHHHHHHHHCCCCCHHH
LVARISRAGQPTAGEWVGRSGPLPSSTTAPQTLTIDSPDK
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]