The gene/protein map for NC_007492 is currently unavailable.
Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is ccmA

Identifier: 77457804

GI number: 77457804

Start: 1766883

End: 1767518

Strand: Direct

Name: ccmA

Synonym: Pfl01_1577

Alternate gene names: 77457804

Gene position: 1766883-1767518 (Clockwise)

Preceding gene: 77457800

Following gene: 77457805

Centisome position: 27.44

GC content: 63.36

Gene sequence:

>636_bases
TTGACCAGTCCTGTCCTGCAAACCGTTGCCCTCGCGTGTGAGCGTGATCTCAGACTGCTCTTCGATAATCTCGAATTGAG
ACTGGCCAGTGGCGATATGGTGCAGATCAGCGGCCCCAACGGCAGCGGCAAGACCAGTTTGCTGCGTTTGCTGGCCGGTC
TGATGCAGCCGACCGACGGTCAGGTGCTGCTCAACGGCAAGCCGCTAGGCGAGCAACGCAGCGAGCTGGCGCGCAATCTG
TTGTGGATCGGCCATGCTGCCGGGATCAAGGACTTGCTCACCCCGGAAGAAAACCTCACCTGGCTCTGCGCCCTGCATCA
ACCCGCCGAACGCGACGCGATCTGGCAGGCCCTGGCGGCGGTTGGATTGCGCGGTTTCGAGGATGTTCCCTGCCACAGTC
TGTCCGCCGGCCAGCAGCGCCGCGTGGCGCTGGCGCGGTTGTATCTGGACAGCCCGCCGTTGTGGATTCTCGACGAACCG
TTCACTGCGCTGGACAAGCAGGGCGTGGCACAGCTTGAAGAACACCTGGCCGGGCACTGCGAACGGGGCGGCCTGGTGGT
GCTCACCACACACCACACGCTGAGCCGGATGCCAGCCGGTTATCGCGACATCGATCTGGGGAATTGGGCGGTATGA

Upstream 100 bases:

>100_bases
TTTGACGCAGCTCTCTGGATTGAGCCGTCATTGCATTTATGCTGCAACTCTTTAACGGCCGCGCCAGAGCCGACTTGAAC
CGTATAAGGCCCGTGAACCC

Downstream 100 bases:

>100_bases
GTGTGTTCGGCCTGCTGGTTGCCCGTGAATCCCGACTGCTGTTCCGCCGCCCGGCGGAGCTGGCCAATCCGCTGATTTTC
TTCGCCATCGTCATCGCGCT

Product: cytochrome c biogenesis protein CcmA

Products: NA

Alternate protein names: Heme exporter protein A

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTSPVLQTVALACERDLRLLFDNLELRLASGDMVQISGPNGSGKTSLLRLLAGLMQPTDGQVLLNGKPLGEQRSELARNL
LWIGHAAGIKDLLTPEENLTWLCALHQPAERDAIWQALAAVGLRGFEDVPCHSLSAGQQRRVALARLYLDSPPLWILDEP
FTALDKQGVAQLEEHLAGHCERGGLVVLTTHHTLSRMPAGYRDIDLGNWAV

Sequences:

>Translated_211_residues
MTSPVLQTVALACERDLRLLFDNLELRLASGDMVQISGPNGSGKTSLLRLLAGLMQPTDGQVLLNGKPLGEQRSELARNL
LWIGHAAGIKDLLTPEENLTWLCALHQPAERDAIWQALAAVGLRGFEDVPCHSLSAGQQRRVALARLYLDSPPLWILDEP
FTALDKQGVAQLEEHLAGHCERGGLVVLTTHHTLSRMPAGYRDIDLGNWAV
>Mature_210_residues
TSPVLQTVALACERDLRLLFDNLELRLASGDMVQISGPNGSGKTSLLRLLAGLMQPTDGQVLLNGKPLGEQRSELARNLL
WIGHAAGIKDLLTPEENLTWLCALHQPAERDAIWQALAAVGLRGFEDVPCHSLSAGQQRRVALARLYLDSPPLWILDEPF
TALDKQGVAQLEEHLAGHCERGGLVVLTTHHTLSRMPAGYRDIDLGNWAV

Specific function: Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system

COG id: COG4133

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain

Homologues:

Organism=Homo sapiens, GI27436953, Length=187, Percent_Identity=31.0160427807487, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI105990541, Length=174, Percent_Identity=29.8850574712644, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI9665248, Length=201, Percent_Identity=32.8358208955224, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI46592971, Length=194, Percent_Identity=25.7731958762887, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI46592915, Length=194, Percent_Identity=25.7731958762887, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI46592898, Length=196, Percent_Identity=26.0204081632653, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI46592978, Length=194, Percent_Identity=25.7731958762887, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI46592956, Length=194, Percent_Identity=25.7731958762887, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI46592964, Length=194, Percent_Identity=25.7731958762887, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI153792144, Length=187, Percent_Identity=28.8770053475936, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI21536376, Length=183, Percent_Identity=28.9617486338798, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI215820660, Length=195, Percent_Identity=26.1538461538462, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI20143975, Length=195, Percent_Identity=26.1538461538462, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI27477115, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI27881501, Length=175, Percent_Identity=25.7142857142857, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI30795238, Length=175, Percent_Identity=25.7142857142857, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI150417984, Length=173, Percent_Identity=30.0578034682081, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI6005701, Length=189, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI27262624, Length=148, Percent_Identity=30.4054054054054, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI27262626, Length=148, Percent_Identity=30.4054054054054, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI45446740, Length=176, Percent_Identity=28.4090909090909, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI47078218, Length=176, Percent_Identity=28.4090909090909, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI31657092, Length=180, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=3e-11,
Organism=Escherichia coli, GI87082064, Length=202, Percent_Identity=51.980198019802, Blast_Score=177, Evalue=5e-46,
Organism=Escherichia coli, GI87081709, Length=149, Percent_Identity=38.9261744966443, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI87081791, Length=195, Percent_Identity=32.3076923076923, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787370, Length=193, Percent_Identity=30.0518134715026, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87081782, Length=173, Percent_Identity=27.7456647398844, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1788761, Length=179, Percent_Identity=32.9608938547486, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI87081834, Length=180, Percent_Identity=32.2222222222222, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786654, Length=194, Percent_Identity=31.4432989690722, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786563, Length=177, Percent_Identity=32.7683615819209, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1786803, Length=152, Percent_Identity=32.2368421052632, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082267, Length=154, Percent_Identity=29.8701298701299, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788225, Length=183, Percent_Identity=31.1475409836066, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1789032, Length=195, Percent_Identity=27.1794871794872, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787758, Length=180, Percent_Identity=28.8888888888889, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI48994943, Length=177, Percent_Identity=30.5084745762712, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787029, Length=177, Percent_Identity=30.5084745762712, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786398, Length=184, Percent_Identity=29.8913043478261, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787164, Length=187, Percent_Identity=33.6898395721925, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788053, Length=201, Percent_Identity=29.3532338308458, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1788165, Length=176, Percent_Identity=30.6818181818182, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1789864, Length=219, Percent_Identity=27.3972602739726, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1789586, Length=163, Percent_Identity=31.9018404907975, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1789672, Length=179, Percent_Identity=26.2569832402235, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786345, Length=200, Percent_Identity=29, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1790467, Length=180, Percent_Identity=27.2222222222222, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786319, Length=172, Percent_Identity=25, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787089, Length=184, Percent_Identity=31.5217391304348, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786703, Length=183, Percent_Identity=30.6010928961749, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786872, Length=162, Percent_Identity=27.7777777777778, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1786698, Length=203, Percent_Identity=25.615763546798, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1789593, Length=186, Percent_Identity=26.8817204301075, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788450, Length=179, Percent_Identity=28.4916201117318, Blast_Score=60, Evalue=7e-11,
Organism=Escherichia coli, GI1788506, Length=208, Percent_Identity=28.3653846153846, Blast_Score=60, Evalue=8e-11,
Organism=Escherichia coli, GI1789891, Length=159, Percent_Identity=31.4465408805031, Blast_Score=60, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=175, Percent_Identity=32, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71983523, Length=191, Percent_Identity=27.2251308900524, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=191, Percent_Identity=27.2251308900524, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=191, Percent_Identity=27.2251308900524, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=167, Percent_Identity=27.5449101796407, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6321720, Length=199, Percent_Identity=28.643216080402, Blast_Score=65, Evalue=8e-12,
Organism=Drosophila melanogaster, GI19920532, Length=174, Percent_Identity=31.6091954022989, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24580930, Length=174, Percent_Identity=31.6091954022989, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24581383, Length=189, Percent_Identity=29.1005291005291, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581385, Length=189, Percent_Identity=29.1005291005291, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581387, Length=189, Percent_Identity=29.1005291005291, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574533, Length=200, Percent_Identity=27.5, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI85724864, Length=177, Percent_Identity=27.683615819209, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24580555, Length=177, Percent_Identity=27.683615819209, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI85816269, Length=177, Percent_Identity=27.683615819209, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24580553, Length=177, Percent_Identity=27.683615819209, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24666092, Length=178, Percent_Identity=26.9662921348315, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI161076682, Length=189, Percent_Identity=24.3386243386243, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI161076684, Length=189, Percent_Identity=24.3386243386243, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581617, Length=189, Percent_Identity=24.3386243386243, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581615, Length=189, Percent_Identity=24.3386243386243, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CCMA_PSEPF (Q3KFY6)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_347309.1
- ProteinModelPortal:   Q3KFY6
- SMR:   Q3KFY6
- STRING:   Q3KFY6
- GeneID:   3716945
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_1577
- eggNOG:   COG4133
- HOGENOM:   HBG758042
- OMA:   VRRPIWL
- ProtClustDB:   PRK13538
- BioCyc:   PFLU205922:PFL_1577-MONOMER
- HAMAP:   MF_01707
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR005895
- InterPro:   IPR003593
- PANTHER:   PTHR19222:SF5
- SMART:   SM00382
- TIGRFAMs:   TIGR01189

Pfam domain/function: PF00005 ABC_tran

EC number: =3.6.3.41

Molecular weight: Translated: 23048; Mature: 22917

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2; PS51243 CCMA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MTSPVLQTVALACERDLRLLFDNLELRLASGDMVQISGPNGSGKTSLLRLLAGLMQPTDG
CCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCC
QVLLNGKPLGEQRSELARNLLWIGHAAGIKDLLTPEENLTWLCALHQPAERDAIWQALAA
EEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHH
VGLRGFEDVPCHSLSAGQQRRVALARLYLDSPPLWILDEPFTALDKQGVAQLEEHLAGHC
HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC
ERGGLVVLTTHHTLSRMPAGYRDIDLGNWAV
CCCCEEEEEECHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSPVLQTVALACERDLRLLFDNLELRLASGDMVQISGPNGSGKTSLLRLLAGLMQPTDG
CCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCC
QVLLNGKPLGEQRSELARNLLWIGHAAGIKDLLTPEENLTWLCALHQPAERDAIWQALAA
EEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHH
VGLRGFEDVPCHSLSAGQQRRVALARLYLDSPPLWILDEPFTALDKQGVAQLEEHLAGHC
HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC
ERGGLVVLTTHHTLSRMPAGYRDIDLGNWAV
CCCCEEEEEECHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA