| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457783
Identifier: 77457783
GI number: 77457783
Start: 1744268
End: 1746748
Strand: Reverse
Name: 77457783
Synonym: Pfl01_1556
Alternate gene names: NA
Gene position: 1746748-1744268 (Counterclockwise)
Preceding gene: 77457784
Following gene: 255961276
Centisome position: 27.13
GC content: 55.5
Gene sequence:
>2481_bases TTGACGACTTCAACCCCACCGGACAACACCGTTTTCGTTCTCTATCCGCCAATCGTCAATGGCCAGACCACGCCCGTGGA AGGTGCACATATCGGCGTGCCCTTGGTCGCCTATGATCTGGTCACCGATGGTGAAGGTGCAGTCGTTCTCGTCGATCCGC CGTCGACGGGCACCATGGATCCCGGAGACGTCATGGAGCTTTGGCTTGAGGGGGAACCGGCAGCACTGGACAGCGAAACC ATTGTCGACCCGAACGCACGCACCACGCTGCGTATTCCCAAGGGTCGACTACATCCGGACCGGGTCAACAAGCTGTACTA CACGATCAGGCGTGGAAGCAGCAATTTAGGGACGTCCACGCCCCCGCTCGAAATACTCTATAACCGCATCCGTCCCGGCC TGAAGGATCGCCTGACCGATCCCGGTGGCCACTCTGAACTCAAGCTCCTTCTGTCTGACGCGATCAAGAACGGCGTCGGC CCGGATTTCGTCAGCGCCGAAGTGTGTGTGGCCTATCCATATTGCCGGGCGTATGACCTCATCACCCTAAAGTGCAATGG CGAACTACTGGAGCCCAAGCCCAAGGTCAATCCGAATCAGGCGCCGCAACCGCCGAATCCCGGTGACGAAATCCCCATTA CCATTTGCTTCACCATCACCCGCGCATATCTGGACAAGGCGAAACGTCAGGACAAAAAACTGCATTTCTCCTACACCGTC ACCGATCAGCTCGGCAACGGCCCGGACACCGATGCGCCGTGGTCGCCGGTGCAGAGTGTGGATGAGGATCTGGATGGCGT CTTACTTCCAATGCCAATTCTGCTTGAACGTAAAGAGGACTATCCCGGTGATGACGCGAGCATCATTGATCTGGAAAAAC TGGCGGGTAATCCATTGCTGCTGGTCGTGATCACCAAAGACAACCGCTTTGTGGTGGGTGACGAGATTGTGGCGACCTAT ACCACTACAGGGCAATCCGACCCCGTGGTAGTCCGGGGCAAAGTCGAAGAGGATCCCTTCACTGGGAAACTGCCCTGTTT CCTTGAAGTGCCCAATGACAAGGTCTTCGCTGGCAGCAAGGTGACTGCGACTTATGAACTGCGCAGGTCCAACGGCGATC TGGTGGGGAGTTCCAACACGGCCAAAGCTTTCGTGATCGGCATCGGTCAGCTCAGCGTCGCGGGCAACCGATCACAGACC TCACCACGCTACCATTCGAACTTGAGCCGCCTGACGGCCTCTTCTCTAGCAAGTAAAGGCGTCTCCACCGCGACTGAAGT TAAGTGGACTTATGCAGGCGACACCGAAGGTGTCCAAGGTCGGACTTTTCTTGATACCGAGCCAGAACGAACCTTAATCG TCTCGCTGCAGGACGAAGAGCACATCATTGCTCGTACGGTACTTCGTCCTGGCAACGTCAGCGGAATATTCAATCTCCGT AACCATCACAGCGGTTGCATTGTTAAGAACGATGGAAGTGTTTTTGGCTGGAGTGAAAATAAGGAAATGTTGCCCCCTCC CGGTTTGAAAGATGTGCGTTATGTGACCGCTGGCGGCCATGCTTATGTTGCGCTTAAAAATGACGACACCGTCGCAGCCT GGGGAGATGCCTCCCGTGGGGGGAGTATTGCACCCGAAATTGATAAAGAGCTCAGAGATGTGAAGAAACTGGCAGCCACC GATGGCGCCTTCCTAGCACTCCGGAATGACGGCCAACTTGTCGCATGGGGCCATCCTGACTATGGAAGTGCGATCCCCAC ATCGGTAATTTCTCAGCTCAGCCCCGTCGACAAAATCATCGGTAACACTGGCGACTTCACAGCGTTGTTACGCGACGGTC GAGTCTGCAGCTGGGGAGCAAGTTGGCCTGATGGTTTTTGGGTATCTGATGCGCGTGGTGCTATTCAGCTATGTGCGAGT GATCGAGCCTTCTGCGCACTGAAGTCAGATCGCCGCGTTGCTGCATGGGGGTCACCCGAGCACGGCGGAGTCATTTCTGA CAACGTGCAGAATTCAACCGAAGAAGTCGTTCTTATCGCATCCACCAGCGCTGCCTTTGCCGCCCTGAAATCCGATGGTT CAGTCGCCGTATGGGGTAATCAACGATTCGGTGGCAAAGCTCCGGACCACCTGCATTCAGTGTCTCATTTGATAGGATCA ACAACAGCTTTTTGTGCAATGACAGCCGATGGCTCGTTGATCACTTGGGGAGTACCTGAAGAAGGTGGGCAAGTGCCTTC AGGGTTATCACCCGCCCTTGCAATATCCTCGTCCTATGGATCATTCAGCGCCGTACTGAATACACGTCGCGCGGTTACGT GGGGGGTGAATACTTCAGCTGCAACCCTTGAATCCATTGTCTGCGTCTACGCTGCCGGCCAACACGTTGTGCTACTGAAT GCTGACAGTCAACTGCTATCGGCAGGCCCCAATGCGCCCGATCTTGCGGCCTTGTCGGGCCTGGTCTCATACAGCGAATA A
Upstream 100 bases:
>100_bases TCGCAAAACCGCCGTAACCTGTCAGATCTGACAGGTGCGAAATTCATCGTTTAGCGCTCTGATAGCTCCTGCCCGTTCCC TCCGCGCAGGAGCCTCATCT
Downstream 100 bases:
>100_bases GTTTTTTTCGTGAAGGGAGTTACCAACATGAACACCAGTACGAACGCAGTTCCGACCGTCAGACAGGTAGCAATCATGGG AGTGCCTGAAGTAGGAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 826; Mature: 825
Protein sequence:
>826_residues MTTSTPPDNTVFVLYPPIVNGQTTPVEGAHIGVPLVAYDLVTDGEGAVVLVDPPSTGTMDPGDVMELWLEGEPAALDSET IVDPNARTTLRIPKGRLHPDRVNKLYYTIRRGSSNLGTSTPPLEILYNRIRPGLKDRLTDPGGHSELKLLLSDAIKNGVG PDFVSAEVCVAYPYCRAYDLITLKCNGELLEPKPKVNPNQAPQPPNPGDEIPITICFTITRAYLDKAKRQDKKLHFSYTV TDQLGNGPDTDAPWSPVQSVDEDLDGVLLPMPILLERKEDYPGDDASIIDLEKLAGNPLLLVVITKDNRFVVGDEIVATY TTTGQSDPVVVRGKVEEDPFTGKLPCFLEVPNDKVFAGSKVTATYELRRSNGDLVGSSNTAKAFVIGIGQLSVAGNRSQT SPRYHSNLSRLTASSLASKGVSTATEVKWTYAGDTEGVQGRTFLDTEPERTLIVSLQDEEHIIARTVLRPGNVSGIFNLR NHHSGCIVKNDGSVFGWSENKEMLPPPGLKDVRYVTAGGHAYVALKNDDTVAAWGDASRGGSIAPEIDKELRDVKKLAAT DGAFLALRNDGQLVAWGHPDYGSAIPTSVISQLSPVDKIIGNTGDFTALLRDGRVCSWGASWPDGFWVSDARGAIQLCAS DRAFCALKSDRRVAAWGSPEHGGVISDNVQNSTEEVVLIASTSAAFAALKSDGSVAVWGNQRFGGKAPDHLHSVSHLIGS TTAFCAMTADGSLITWGVPEEGGQVPSGLSPALAISSSYGSFSAVLNTRRAVTWGVNTSAATLESIVCVYAAGQHVVLLN ADSQLLSAGPNAPDLAALSGLVSYSE
Sequences:
>Translated_826_residues MTTSTPPDNTVFVLYPPIVNGQTTPVEGAHIGVPLVAYDLVTDGEGAVVLVDPPSTGTMDPGDVMELWLEGEPAALDSET IVDPNARTTLRIPKGRLHPDRVNKLYYTIRRGSSNLGTSTPPLEILYNRIRPGLKDRLTDPGGHSELKLLLSDAIKNGVG PDFVSAEVCVAYPYCRAYDLITLKCNGELLEPKPKVNPNQAPQPPNPGDEIPITICFTITRAYLDKAKRQDKKLHFSYTV TDQLGNGPDTDAPWSPVQSVDEDLDGVLLPMPILLERKEDYPGDDASIIDLEKLAGNPLLLVVITKDNRFVVGDEIVATY TTTGQSDPVVVRGKVEEDPFTGKLPCFLEVPNDKVFAGSKVTATYELRRSNGDLVGSSNTAKAFVIGIGQLSVAGNRSQT SPRYHSNLSRLTASSLASKGVSTATEVKWTYAGDTEGVQGRTFLDTEPERTLIVSLQDEEHIIARTVLRPGNVSGIFNLR NHHSGCIVKNDGSVFGWSENKEMLPPPGLKDVRYVTAGGHAYVALKNDDTVAAWGDASRGGSIAPEIDKELRDVKKLAAT DGAFLALRNDGQLVAWGHPDYGSAIPTSVISQLSPVDKIIGNTGDFTALLRDGRVCSWGASWPDGFWVSDARGAIQLCAS DRAFCALKSDRRVAAWGSPEHGGVISDNVQNSTEEVVLIASTSAAFAALKSDGSVAVWGNQRFGGKAPDHLHSVSHLIGS TTAFCAMTADGSLITWGVPEEGGQVPSGLSPALAISSSYGSFSAVLNTRRAVTWGVNTSAATLESIVCVYAAGQHVVLLN ADSQLLSAGPNAPDLAALSGLVSYSE >Mature_825_residues TTSTPPDNTVFVLYPPIVNGQTTPVEGAHIGVPLVAYDLVTDGEGAVVLVDPPSTGTMDPGDVMELWLEGEPAALDSETI VDPNARTTLRIPKGRLHPDRVNKLYYTIRRGSSNLGTSTPPLEILYNRIRPGLKDRLTDPGGHSELKLLLSDAIKNGVGP DFVSAEVCVAYPYCRAYDLITLKCNGELLEPKPKVNPNQAPQPPNPGDEIPITICFTITRAYLDKAKRQDKKLHFSYTVT DQLGNGPDTDAPWSPVQSVDEDLDGVLLPMPILLERKEDYPGDDASIIDLEKLAGNPLLLVVITKDNRFVVGDEIVATYT TTGQSDPVVVRGKVEEDPFTGKLPCFLEVPNDKVFAGSKVTATYELRRSNGDLVGSSNTAKAFVIGIGQLSVAGNRSQTS PRYHSNLSRLTASSLASKGVSTATEVKWTYAGDTEGVQGRTFLDTEPERTLIVSLQDEEHIIARTVLRPGNVSGIFNLRN HHSGCIVKNDGSVFGWSENKEMLPPPGLKDVRYVTAGGHAYVALKNDDTVAAWGDASRGGSIAPEIDKELRDVKKLAATD GAFLALRNDGQLVAWGHPDYGSAIPTSVISQLSPVDKIIGNTGDFTALLRDGRVCSWGASWPDGFWVSDARGAIQLCASD RAFCALKSDRRVAAWGSPEHGGVISDNVQNSTEEVVLIASTSAAFAALKSDGSVAVWGNQRFGGKAPDHLHSVSHLIGST TAFCAMTADGSLITWGVPEEGGQVPSGLSPALAISSSYGSFSAVLNTRRAVTWGVNTSAATLESIVCVYAAGQHVVLLNA DSQLLSAGPNAPDLAALSGLVSYSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88005; Mature: 87873
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSTPPDNTVFVLYPPIVNGQTTPVEGAHIGVPLVAYDLVTDGEGAVVLVDPPSTGTMD CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCC PGDVMELWLEGEPAALDSETIVDPNARTTLRIPKGRLHPDRVNKLYYTIRRGSSNLGTST CHHHEEEEECCCCCCCCCCEEECCCCCEEEECCCCCCCHHHHCEEEEEEECCCCCCCCCC PPLEILYNRIRPGLKDRLTDPGGHSELKLLLSDAIKNGVGPDFVSAEVCVAYPYCRAYDL CHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEE ITLKCNGELLEPKPKVNPNQAPQPPNPGDEIPITICFTITRAYLDKAKRQDKKLHFSYTV EEEEECCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEEEEE TDQLGNGPDTDAPWSPVQSVDEDLDGVLLPMPILLERKEDYPGDDASIIDLEKLAGNPLL ECCCCCCCCCCCCCCHHHHHHHHCCCEEECCCEEEECCCCCCCCCCEEEEHHHHCCCCEE LVVITKDNRFVVGDEIVATYTTTGQSDPVVVRGKVEEDPFTGKLPCFLEVPNDKVFAGSK EEEEECCCEEEECCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEECCCE VTATYELRRSNGDLVGSSNTAKAFVIGIGQLSVAGNRSQTSPRYHSNLSRLTASSLASKG EEEEEEEECCCCCEECCCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC VSTATEVKWTYAGDTEGVQGRTFLDTEPERTLIVSLQDEEHIIARTVLRPGNVSGIFNLR CCCCCEEEEEECCCCCCCCCCEEECCCCCCEEEEEECCCCCEEEHEEECCCCCCEEEEEC NHHSGCIVKNDGSVFGWSENKEMLPPPGLKDVRYVTAGGHAYVALKNDDTVAAWGDASRG CCCCCCEEECCCCEEEECCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEECCCCCCC GSIAPEIDKELRDVKKLAATDGAFLALRNDGQLVAWGHPDYGSAIPTSVISQLSPVDKII CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHCHHHHHH GNTGDFTALLRDGRVCSWGASWPDGFWVSDARGAIQLCASDRAFCALKSDRRVAAWGSPE CCCCCEEEEEECCCEEECCCCCCCCEEECCCCCEEEEECCCCEEEEECCCCEEEECCCCC HGGVISDNVQNSTEEVVLIASTSAAFAALKSDGSVAVWGNQRFGGKAPDHLHSVSHLIGS CCCEECCCCCCCCCCEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCC TTAFCAMTADGSLITWGVPEEGGQVPSGLSPALAISSSYGSFSAVLNTRRAVTWGVNTSA CEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCEEEEECCCCCH ATLESIVCVYAAGQHVVLLNADSQLLSAGPNAPDLAALSGLVSYSE HHHHHEEEEEECCCEEEEECCCCHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TTSTPPDNTVFVLYPPIVNGQTTPVEGAHIGVPLVAYDLVTDGEGAVVLVDPPSTGTMD CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCC PGDVMELWLEGEPAALDSETIVDPNARTTLRIPKGRLHPDRVNKLYYTIRRGSSNLGTST CHHHEEEEECCCCCCCCCCEEECCCCCEEEECCCCCCCHHHHCEEEEEEECCCCCCCCCC PPLEILYNRIRPGLKDRLTDPGGHSELKLLLSDAIKNGVGPDFVSAEVCVAYPYCRAYDL CHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEE ITLKCNGELLEPKPKVNPNQAPQPPNPGDEIPITICFTITRAYLDKAKRQDKKLHFSYTV EEEEECCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEEEEE TDQLGNGPDTDAPWSPVQSVDEDLDGVLLPMPILLERKEDYPGDDASIIDLEKLAGNPLL ECCCCCCCCCCCCCCHHHHHHHHCCCEEECCCEEEECCCCCCCCCCEEEEHHHHCCCCEE LVVITKDNRFVVGDEIVATYTTTGQSDPVVVRGKVEEDPFTGKLPCFLEVPNDKVFAGSK EEEEECCCEEEECCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEECCCE VTATYELRRSNGDLVGSSNTAKAFVIGIGQLSVAGNRSQTSPRYHSNLSRLTASSLASKG EEEEEEEECCCCCEECCCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC VSTATEVKWTYAGDTEGVQGRTFLDTEPERTLIVSLQDEEHIIARTVLRPGNVSGIFNLR CCCCCEEEEEECCCCCCCCCCEEECCCCCCEEEEEECCCCCEEEHEEECCCCCCEEEEEC NHHSGCIVKNDGSVFGWSENKEMLPPPGLKDVRYVTAGGHAYVALKNDDTVAAWGDASRG CCCCCCEEECCCCEEEECCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEECCCCCCC GSIAPEIDKELRDVKKLAATDGAFLALRNDGQLVAWGHPDYGSAIPTSVISQLSPVDKII CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHCHHHHHH GNTGDFTALLRDGRVCSWGASWPDGFWVSDARGAIQLCASDRAFCALKSDRRVAAWGSPE CCCCCEEEEEECCCEEECCCCCCCCEEECCCCCEEEEECCCCEEEEECCCCEEEECCCCC HGGVISDNVQNSTEEVVLIASTSAAFAALKSDGSVAVWGNQRFGGKAPDHLHSVSHLIGS CCCEECCCCCCCCCCEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCC TTAFCAMTADGSLITWGVPEEGGQVPSGLSPALAISSSYGSFSAVLNTRRAVTWGVNTSA CEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCEEEEECCCCCH ATLESIVCVYAAGQHVVLLNADSQLLSAGPNAPDLAALSGLVSYSE HHHHHEEEEEECCCEEEEECCCCHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA