Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 255961276

Identifier: 255961276

GI number: 255961276

Start: 1742354

End: 1744240

Strand: Reverse

Name: 255961276

Synonym: Pfl01_1555

Alternate gene names: NA

Gene position: 1744240-1742354 (Counterclockwise)

Preceding gene: 77457783

Following gene: 255961277

Centisome position: 27.09

GC content: 53.15

Gene sequence:

>1887_bases
ATGAACACCAGTACGAACGCAGTTCCGACCGTCAGACAGGTAGCAATCATGGGAGTGCCTGAAGTAGGAGGAACACTGAC
CGGCAGCTATATATATGAAAACCCTGATGAGAATCCCGAAGGGTTATCTACTTTCTGTTGGTATGACGGTGGAACCAGCG
GAAAAATTATTGCAACTTCAATCGACCTGACCTTGGTTGCTACACATGCAGGAATGAAACTTACGTTTTCGGTGACCCCC
ATTGCTGCATCGGGAGAAAAAGGCGTGGAATCGTTTTCTGACCCCCTTCAAGTGATAAAAGAGGGATTTCAGAATATCTC
GGATGAAGAAAGTGAAAACAGCTTTCTGAAACAAAGAGGTCAGTTCGCTTTTCATGCGAACGGTCCAAAGGACGGAGTAT
TCACCTCGACCGCAGGAGCATTTGCCCTGAAGAGCAGAGTCACACAAAACGTCGCTGTTGTAGGCACGCAAAGTTTTGGT
GGCGTAGTCCCTCCAGAGATAGCGACATACTTGAGAAACAACCCCGCTATAACAATGTTCACCACCACAACAAATTTTGG
TGCCCTGGTCCCCATAGGTGAACACAATCAGTTGCTCGTCTGGGGACCCGGGATACCGGCGACGTTACCCAACCTTCAAG
ACATCAAGTCGGTCTACAGCAACGACTCCTCGCTAGCATTTATATATAAGGATCCACCCTCCGGCGAAAACACTATCGGC
GCCGTCGGAACGGCAGCAACAGGCGGTGTCGTGCCGGTCGAAGTGCAAAACAAACTGATGTTTGATCGCCCGAAAGCCAT
CTACGCCACCCTCGATGCTTTCACTGTGCTGACAGACAGCGGACGCGTATATGCCTGGGGTAATGCGGCGAATGGCGGAA
CAATTCCGATCGATGTACAGACTCAATTGAATTCTATGAAAGTCGATCGCATTGTTGCTTCCCGAACTGCATTTTGTGCC
CTGACGGAATCCGGAGAAATCATTGCGTGGGGCGCTAACGGCGCTATTCCCGCTGTGACTCTGGAGAAGATATATGACGA
TGACGGAGCGCTCACGGTCATTGCCAATGACAGCGCATTCATCGCCATAACGAGAGGCCGCAGAAAAGCCGCTACATGGG
GGTTGGCGGCACACGGCGGAACTATGTCAGAGGCGGCCGCCAGTCTTGCTGCCCGAGGAAACCTCACGCTTTGCACGGCT
GCGCCTTGGGCGATGTGCTTCATCAATGAAAGCGGACAAGCCGCTGCCTGGGGATCGGCTGGCCATGGTGGCGGGACCAT
CCCTGCCCAAAGCGCCGGTGAAGAAACCTCGACTTTGCCCTTGAATGCTCAGGCGTTATTGGAGCAAGGCGATATCGCAG
CGCAGATCGAGACCATGTTCAGCAATGCCAGATTCTCAAAAAGCCTACAACGCCGCGTGTCTTCCAGTGTCACCCTGACC
AACGGCGAAGCAATCGAACTAACGCGCAACGATGGCAGCTTTGTCTTGCTCAACCGCCATCCCGATGGCCGCACAAAAAA
TCTGGTTTCTTGGGGTTTAGCTGCGACGGGAGGCACGATACCCGGTGATATCAAGCAAACACTGATGGCCAGTCGCATTC
GAAAAATCTACTGCAGCAATGGCGCTTACGCAGCTCTGGTTGACCAAGGCACAACCGAAGGTGTGGTCGTCACCTGGGGA
CGAGCCTCACAGGATGGCGGGATGATTCCGGCCGCTCTTCGAGACGCATTGAGTAGCGGTGTTGTCGAAATATATACCAT
CCAGGCAGCTCCAGCACCTTCGACCGCGACGGTTCCAGCCGCCTTCGCGGCACGCAAATCGAACAACAAATATGTGACGT
GGGGTGCCCACGTCAAACAAGAAGAGTTTGAGCCAGGACGCAGTTGA

Upstream 100 bases:

>100_bases
TCAACTGCTATCGGCAGGCCCCAATGCGCCCGATCTTGCGGCCTTGTCGGGCCTGGTCTCATACAGCGAATAAGTTTTTT
TCGTGAAGGGAGTTACCAAC

Downstream 100 bases:

>100_bases
GCTTGTTCAACCGACAGACTATTTGTACGTTGAGGAGTATTGCTATGAGTACTACAGCCGAACCAATTGCGCGGAATGTC
ATGATCATTGGAGAGCCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MNTSTNAVPTVRQVAIMGVPEVGGTLTGSYIYENPDENPEGLSTFCWYDGGTSGKIIATSIDLTLVATHAGMKLTFSVTP
IAASGEKGVESFSDPLQVIKEGFQNISDEESENSFLKQRGQFAFHANGPKDGVFTSTAGAFALKSRVTQNVAVVGTQSFG
GVVPPEIATYLRNNPAITMFTTTTNFGALVPIGEHNQLLVWGPGIPATLPNLQDIKSVYSNDSSLAFIYKDPPSGENTIG
AVGTAATGGVVPVEVQNKLMFDRPKAIYATLDAFTVLTDSGRVYAWGNAANGGTIPIDVQTQLNSMKVDRIVASRTAFCA
LTESGEIIAWGANGAIPAVTLEKIYDDDGALTVIANDSAFIAITRGRRKAATWGLAAHGGTMSEAAASLAARGNLTLCTA
APWAMCFINESGQAAAWGSAGHGGGTIPAQSAGEETSTLPLNAQALLEQGDIAAQIETMFSNARFSKSLQRRVSSSVTLT
NGEAIELTRNDGSFVLLNRHPDGRTKNLVSWGLAATGGTIPGDIKQTLMASRIRKIYCSNGAYAALVDQGTTEGVVVTWG
RASQDGGMIPAALRDALSSGVVEIYTIQAAPAPSTATVPAAFAARKSNNKYVTWGAHVKQEEFEPGRS

Sequences:

>Translated_628_residues
MNTSTNAVPTVRQVAIMGVPEVGGTLTGSYIYENPDENPEGLSTFCWYDGGTSGKIIATSIDLTLVATHAGMKLTFSVTP
IAASGEKGVESFSDPLQVIKEGFQNISDEESENSFLKQRGQFAFHANGPKDGVFTSTAGAFALKSRVTQNVAVVGTQSFG
GVVPPEIATYLRNNPAITMFTTTTNFGALVPIGEHNQLLVWGPGIPATLPNLQDIKSVYSNDSSLAFIYKDPPSGENTIG
AVGTAATGGVVPVEVQNKLMFDRPKAIYATLDAFTVLTDSGRVYAWGNAANGGTIPIDVQTQLNSMKVDRIVASRTAFCA
LTESGEIIAWGANGAIPAVTLEKIYDDDGALTVIANDSAFIAITRGRRKAATWGLAAHGGTMSEAAASLAARGNLTLCTA
APWAMCFINESGQAAAWGSAGHGGGTIPAQSAGEETSTLPLNAQALLEQGDIAAQIETMFSNARFSKSLQRRVSSSVTLT
NGEAIELTRNDGSFVLLNRHPDGRTKNLVSWGLAATGGTIPGDIKQTLMASRIRKIYCSNGAYAALVDQGTTEGVVVTWG
RASQDGGMIPAALRDALSSGVVEIYTIQAAPAPSTATVPAAFAARKSNNKYVTWGAHVKQEEFEPGRS
>Mature_628_residues
MNTSTNAVPTVRQVAIMGVPEVGGTLTGSYIYENPDENPEGLSTFCWYDGGTSGKIIATSIDLTLVATHAGMKLTFSVTP
IAASGEKGVESFSDPLQVIKEGFQNISDEESENSFLKQRGQFAFHANGPKDGVFTSTAGAFALKSRVTQNVAVVGTQSFG
GVVPPEIATYLRNNPAITMFTTTTNFGALVPIGEHNQLLVWGPGIPATLPNLQDIKSVYSNDSSLAFIYKDPPSGENTIG
AVGTAATGGVVPVEVQNKLMFDRPKAIYATLDAFTVLTDSGRVYAWGNAANGGTIPIDVQTQLNSMKVDRIVASRTAFCA
LTESGEIIAWGANGAIPAVTLEKIYDDDGALTVIANDSAFIAITRGRRKAATWGLAAHGGTMSEAAASLAARGNLTLCTA
APWAMCFINESGQAAAWGSAGHGGGTIPAQSAGEETSTLPLNAQALLEQGDIAAQIETMFSNARFSKSLQRRVSSSVTLT
NGEAIELTRNDGSFVLLNRHPDGRTKNLVSWGLAATGGTIPGDIKQTLMASRIRKIYCSNGAYAALVDQGTTEGVVVTWG
RASQDGGMIPAALRDALSSGVVEIYTIQAAPAPSTATVPAAFAARKSNNKYVTWGAHVKQEEFEPGRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65732; Mature: 65732

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSTNAVPTVRQVAIMGVPEVGGTLTGSYIYENPDENPEGLSTFCWYDGGTSGKIIATS
CCCCCCCCCCEEEEEEEECCCCCCEEECCEEECCCCCCCCCCEEEEEECCCCCCCEEEEE
IDLTLVATHAGMKLTFSVTPIAASGEKGVESFSDPLQVIKEGFQNISDEESENSFLKQRG
EEEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
QFAFHANGPKDGVFTSTAGAFALKSRVTQNVAVVGTQSFGGVVPPEIATYLRNNPAITMF
CEEEECCCCCCCEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEE
TTTTNFGALVPIGEHNQLLVWGPGIPATLPNLQDIKSVYSNDSSLAFIYKDPPSGENTIG
EEECCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEE
AVGTAATGGVVPVEVQNKLMFDRPKAIYATLDAFTVLTDSGRVYAWGNAANGGTIPIDVQ
ECCCCCCCCEEEEEECCCEEECCCCEEEEEEEEEEEEECCCCEEEECCCCCCCEEEEEEE
TQLNSMKVDRIVASRTAFCALTESGEIIAWGANGAIPAVTLEKIYDDDGALTVIANDSAF
CCCCCEEHHHHHHCCEEEEEEECCCCEEEECCCCCCCEEEEEEEECCCCCEEEEECCCEE
IAITRGRRKAATWGLAAHGGTMSEAAASLAARGNLTLCTAAPWAMCFINESGQAAAWGSA
EEEECCCCCCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCEEECCCC
GHGGGTIPAQSAGEETSTLPLNAQALLEQGDIAAQIETMFSNARFSKSLQRRVSSSVTLT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
NGEAIELTRNDGSFVLLNRHPDGRTKNLVSWGLAATGGTIPGDIKQTLMASRIRKIYCSN
CCCEEEEEECCCCEEEEECCCCCCCCCHHEECEEECCCCCCHHHHHHHHHHHHHEEEECC
GAYAALVDQGTTEGVVVTWGRASQDGGMIPAALRDALSSGVVEIYTIQAAPAPSTATVPA
CCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCH
AFAARKSNNKYVTWGAHVKQEEFEPGRS
HHHHHCCCCCEEEECCCCCHHCCCCCCC
>Mature Secondary Structure
MNTSTNAVPTVRQVAIMGVPEVGGTLTGSYIYENPDENPEGLSTFCWYDGGTSGKIIATS
CCCCCCCCCCEEEEEEEECCCCCCEEECCEEECCCCCCCCCCEEEEEECCCCCCCEEEEE
IDLTLVATHAGMKLTFSVTPIAASGEKGVESFSDPLQVIKEGFQNISDEESENSFLKQRG
EEEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
QFAFHANGPKDGVFTSTAGAFALKSRVTQNVAVVGTQSFGGVVPPEIATYLRNNPAITMF
CEEEECCCCCCCEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEE
TTTTNFGALVPIGEHNQLLVWGPGIPATLPNLQDIKSVYSNDSSLAFIYKDPPSGENTIG
EEECCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEE
AVGTAATGGVVPVEVQNKLMFDRPKAIYATLDAFTVLTDSGRVYAWGNAANGGTIPIDVQ
ECCCCCCCCEEEEEECCCEEECCCCEEEEEEEEEEEEECCCCEEEECCCCCCCEEEEEEE
TQLNSMKVDRIVASRTAFCALTESGEIIAWGANGAIPAVTLEKIYDDDGALTVIANDSAF
CCCCCEEHHHHHHCCEEEEEEECCCCEEEECCCCCCCEEEEEEEECCCCCEEEEECCCEE
IAITRGRRKAATWGLAAHGGTMSEAAASLAARGNLTLCTAAPWAMCFINESGQAAAWGSA
EEEECCCCCCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCEEECCCC
GHGGGTIPAQSAGEETSTLPLNAQALLEQGDIAAQIETMFSNARFSKSLQRRVSSSVTLT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
NGEAIELTRNDGSFVLLNRHPDGRTKNLVSWGLAATGGTIPGDIKQTLMASRIRKIYCSN
CCCEEEEEECCCCEEEEECCCCCCCCCHHEECEEECCCCCCHHHHHHHHHHHHHEEEECC
GAYAALVDQGTTEGVVVTWGRASQDGGMIPAALRDALSSGVVEIYTIQAAPAPSTATVPA
CCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCH
AFAARKSNNKYVTWGAHVKQEEFEPGRS
HHHHHCCCCCEEEECCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA