| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457744
Identifier: 77457744
GI number: 77457744
Start: 1703851
End: 1706775
Strand: Direct
Name: 77457744
Synonym: Pfl01_1517
Alternate gene names: NA
Gene position: 1703851-1706775 (Clockwise)
Preceding gene: 77457743
Following gene: 77457745
Centisome position: 26.46
GC content: 60.79
Gene sequence:
>2925_bases ATGCAAGGCAAGAACAGTTCTGGACACGGTTTGGCACTCAACGAACAGTTGACCGTTGTGCTGATATCTCACGAACGCCC GGCGTTTCTGCGCAGGGCCGTGCGTTTCTACAGCACCCTGCCGTGCAGGATCCTGGTGCTGGATTCTTCGGCCGAGGCAC AACCGGACATGCTCGGGCAGTTTGCCAACGTCGACTACCAGCACTTGCCGCAGTATGGCTACTGGGGCATCTGCGCCAAG CTGGCCTACGGTGTCGAGCAATTGCAGACGCCGTACATGGTGTTTGCGGCGGACGACGACTTCCTCGTGCACGATGCCTT GCATGAAGCCGTCGCCTTCATGAATGCCAACCCCGATTACAGCCTGTGCCATGGCTACAGCATGATGTACCTGTCGCTGG CCAACAGCGTCAGCTACTACCGTCGCGACAAGAAGGTCTGCGAGGACTACTCGGCCGATCTCGCCCAGGATCGCCTGATC GACTACATGTATCAGTACCTGCCGCCGTTCTATGCCGTGCAACGTACGGAGATTCTGCGCGACTGGTATGCGGCCATGCC GCAAGACACGATCTTCCAGTGGCAGGAAGTCGGTCACACCTACTACATGCTGGCGCGGGGCAAGGCGCGGATTCTGCCGA TCCCGTACGTGGTGCGTGAGCTCAACTATCAGCACTCCGACCACAACACCGAGATTTATCACTCGCTGGCCTACACCGAC GCCAGGCACGTCGCCGAACGCGAAGCCTTTGCCGGTTTCCTTGCCGGGTTGCCGACCCAGGTCAAGCATCAGGATCCGGA GCAGGGCAAACAGTTCGTGCTGGATAGCTTCGAAGCACTGGCCGATAGCCTGCGCGCCGGTCGCGCGTTGACTGCCGAGC TGGTATTCGAGTCGGCCTGGACCGATATCGAGGCGGGCCCACAGCGCCGTTTCGGCCCGAAACAGTACGTCGAGATGCCG TTCTACAATCAGGCGTTCTTCGATCAATTGACCCAGTTCGAATTCCTGCTGCACTCGATGCCGGCAGGGCGCCTGCAGTT GCAAGGCCTGGAAGGCATCTGGGCGCGCCAGCAGAACCTGATGCTGGCCCGCAACAACGACACCCCGGAAAGTGTGGTCG ACCGTTTGTGGCAGGCCCACGACAGCAACGTGTTCAACCGCCAGGTCATCACGCGTCTGATTGACCAGTTGCAATCGATG GGCGAAGAAGAGGACGCGCAAAAACTGCGCGACTGGATCGCGCGTCTGCAAGCGACCTCCCTCAAAGGCAACGATCAGGC ATTCGGCAAGATGAGGACCGGTCGCCTGCTTGAATGGCTCGCGGCGCGTCAACCGGATGCCGGACAGCTCGAGGCTATCG CCGGTCACCTGGCAGCCCACGATGGCGGTCCGCAGTTCGGCATCTTCCTGCTCGATCTGGACAACGACATCGACAAGTTG CAGATCACCCTGGACAGCCTGCTCGAAGGTCACAGCAAGGCCTTCAAGGTGGTGGTGTTCACCACGGGTGAGCCGCCGGC CGCGACCACTGCGCAAAACACTTTGCACTTTGTCCGGGTCTCGCCGAGCAATTTTGTCGACAAGCTGAACCTGAGCGTCA ATCAGTCGCCGTGCGACTGGCTGTTGCTGGCCGAAGCGGGCGACGAGTTCACCGCCGGCGGTCTGTTGCGCGCCGGTCTG GAGCTGGCGTCTGCCGACGGGTGCCGCGCGGTGGCCACCGACGAAATCCAGCGCACCGCCGATGGCGCACTGGTGGATGT CTTCCGTCCGGGCTTCAACCTCGATCTGTTGCAAAGCCTGCCGGCACTGATGGCACGGCACTGGTTGATCCGTCGTGAAG TGTTGATCGAGGCCGGTGGTTATCAGGCCGACTTCAGCAAGGCGCTGGAATTCGATCTGCTGCTGCGCATCATTGAGCAA GGTGGTCTGGATGGCCTGGCTCACCTTGACGAACCGCTGTTGATTGCCGGTGCTTCGGTGCTGGAAGAAAACGCCGATGA GCGTCAGGCGCTGCTGCGTCACCTGGGCAATCGTGGTTACAAGGCGAAAATCACCTCGTCGAAACCGGGCACTTATCAGG TCGACTACCGTCACGGCGAACAGCCATTGGTGTCGGTCATCGTGCCGGCAATCGATGATCTTCCTGCGCTGCAGCGTTGC ATCGAAGGCGTACTGCTGCGAACCCGCTACACCCGCTATGAGGTGTTGATCGCCGCAGGTCCCAATCTGTCCGCCGCGGT CAATGACTGGCTGGGCACACTGCAGCACGCCAAGGTGCGGGTCTTGCGTGCCGATCAGCCACTCGGTGCCGTGGCGCTGA GCAACGCCGCCAGCCAGCAGGCGCAGGGTGAATACCTGGTGCTGATGGCCGCCGACGGTGAAGTGGTCAATCCGAACTGG ATCGAGTCGCTGCTCAACCATGCCCAGCGTCCGGAAGTCGGCGTGGTCGGTGCGAAACTGGTGGACCGCGATGGCAAGAT CGCTCAGGCCGGTCTGATTCTGGGGCTGAACGATGGTGTCGGTTCTGCCTTCATCGGTGAGAAACATGACGCCGAGGGCT ACATGCAGCGTCTGGCCGTGGATCAGAACTACTCGGCGGTGTCGGGCATCTGCCTGATGATTGGCAAAGCACTGTTCAAT GCGCTGGATGGTCTGGATGACGCGCAATTTGCTGACGGCTTCAGCGATGTCGATCTGTGCCTGAAGGCGGGTGAAGCCGG TTTCCTCACCGTCTGGACGCCGCTGGTTCAGGTCATCCATTCGGGCGAGGTGCCGCAGGCTCCACAGGCACTGCAAGCGC TGCGTGAAAAATGGTCCGGCGCTTTTGCCCGGGACACGGCGTATAACCCGAACCTGAGCCTGAGCGGCAAAGGTTTTGTT CTCAACGAAAGTGCTTCGCTGGACTGGGCGCAGTTGCTCGCCTAA
Upstream 100 bases:
>100_bases GTTGCTGATCACTGTCGCGCCGGATGGCTATCTGCGTCGCGTTCGTTAATCGACAAAAACAACGTTGAGTTTTCGGCGAC TCGTCGCTTGTGGGGAATTT
Downstream 100 bases:
>100_bases GCCTTCGCACAGGGAACAGGATTCAAGACATGTTCAACGGTAAATCGATTTTCATCTCCGGTGGCACCGGCTCGTTCGGG CGCAAGTTCATCGCGCGCCT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 974; Mature: 974
Protein sequence:
>974_residues MQGKNSSGHGLALNEQLTVVLISHERPAFLRRAVRFYSTLPCRILVLDSSAEAQPDMLGQFANVDYQHLPQYGYWGICAK LAYGVEQLQTPYMVFAADDDFLVHDALHEAVAFMNANPDYSLCHGYSMMYLSLANSVSYYRRDKKVCEDYSADLAQDRLI DYMYQYLPPFYAVQRTEILRDWYAAMPQDTIFQWQEVGHTYYMLARGKARILPIPYVVRELNYQHSDHNTEIYHSLAYTD ARHVAEREAFAGFLAGLPTQVKHQDPEQGKQFVLDSFEALADSLRAGRALTAELVFESAWTDIEAGPQRRFGPKQYVEMP FYNQAFFDQLTQFEFLLHSMPAGRLQLQGLEGIWARQQNLMLARNNDTPESVVDRLWQAHDSNVFNRQVITRLIDQLQSM GEEEDAQKLRDWIARLQATSLKGNDQAFGKMRTGRLLEWLAARQPDAGQLEAIAGHLAAHDGGPQFGIFLLDLDNDIDKL QITLDSLLEGHSKAFKVVVFTTGEPPAATTAQNTLHFVRVSPSNFVDKLNLSVNQSPCDWLLLAEAGDEFTAGGLLRAGL ELASADGCRAVATDEIQRTADGALVDVFRPGFNLDLLQSLPALMARHWLIRREVLIEAGGYQADFSKALEFDLLLRIIEQ GGLDGLAHLDEPLLIAGASVLEENADERQALLRHLGNRGYKAKITSSKPGTYQVDYRHGEQPLVSVIVPAIDDLPALQRC IEGVLLRTRYTRYEVLIAAGPNLSAAVNDWLGTLQHAKVRVLRADQPLGAVALSNAASQQAQGEYLVLMAADGEVVNPNW IESLLNHAQRPEVGVVGAKLVDRDGKIAQAGLILGLNDGVGSAFIGEKHDAEGYMQRLAVDQNYSAVSGICLMIGKALFN ALDGLDDAQFADGFSDVDLCLKAGEAGFLTVWTPLVQVIHSGEVPQAPQALQALREKWSGAFARDTAYNPNLSLSGKGFV LNESASLDWAQLLA
Sequences:
>Translated_974_residues MQGKNSSGHGLALNEQLTVVLISHERPAFLRRAVRFYSTLPCRILVLDSSAEAQPDMLGQFANVDYQHLPQYGYWGICAK LAYGVEQLQTPYMVFAADDDFLVHDALHEAVAFMNANPDYSLCHGYSMMYLSLANSVSYYRRDKKVCEDYSADLAQDRLI DYMYQYLPPFYAVQRTEILRDWYAAMPQDTIFQWQEVGHTYYMLARGKARILPIPYVVRELNYQHSDHNTEIYHSLAYTD ARHVAEREAFAGFLAGLPTQVKHQDPEQGKQFVLDSFEALADSLRAGRALTAELVFESAWTDIEAGPQRRFGPKQYVEMP FYNQAFFDQLTQFEFLLHSMPAGRLQLQGLEGIWARQQNLMLARNNDTPESVVDRLWQAHDSNVFNRQVITRLIDQLQSM GEEEDAQKLRDWIARLQATSLKGNDQAFGKMRTGRLLEWLAARQPDAGQLEAIAGHLAAHDGGPQFGIFLLDLDNDIDKL QITLDSLLEGHSKAFKVVVFTTGEPPAATTAQNTLHFVRVSPSNFVDKLNLSVNQSPCDWLLLAEAGDEFTAGGLLRAGL ELASADGCRAVATDEIQRTADGALVDVFRPGFNLDLLQSLPALMARHWLIRREVLIEAGGYQADFSKALEFDLLLRIIEQ GGLDGLAHLDEPLLIAGASVLEENADERQALLRHLGNRGYKAKITSSKPGTYQVDYRHGEQPLVSVIVPAIDDLPALQRC IEGVLLRTRYTRYEVLIAAGPNLSAAVNDWLGTLQHAKVRVLRADQPLGAVALSNAASQQAQGEYLVLMAADGEVVNPNW IESLLNHAQRPEVGVVGAKLVDRDGKIAQAGLILGLNDGVGSAFIGEKHDAEGYMQRLAVDQNYSAVSGICLMIGKALFN ALDGLDDAQFADGFSDVDLCLKAGEAGFLTVWTPLVQVIHSGEVPQAPQALQALREKWSGAFARDTAYNPNLSLSGKGFV LNESASLDWAQLLA >Mature_974_residues MQGKNSSGHGLALNEQLTVVLISHERPAFLRRAVRFYSTLPCRILVLDSSAEAQPDMLGQFANVDYQHLPQYGYWGICAK LAYGVEQLQTPYMVFAADDDFLVHDALHEAVAFMNANPDYSLCHGYSMMYLSLANSVSYYRRDKKVCEDYSADLAQDRLI DYMYQYLPPFYAVQRTEILRDWYAAMPQDTIFQWQEVGHTYYMLARGKARILPIPYVVRELNYQHSDHNTEIYHSLAYTD ARHVAEREAFAGFLAGLPTQVKHQDPEQGKQFVLDSFEALADSLRAGRALTAELVFESAWTDIEAGPQRRFGPKQYVEMP FYNQAFFDQLTQFEFLLHSMPAGRLQLQGLEGIWARQQNLMLARNNDTPESVVDRLWQAHDSNVFNRQVITRLIDQLQSM GEEEDAQKLRDWIARLQATSLKGNDQAFGKMRTGRLLEWLAARQPDAGQLEAIAGHLAAHDGGPQFGIFLLDLDNDIDKL QITLDSLLEGHSKAFKVVVFTTGEPPAATTAQNTLHFVRVSPSNFVDKLNLSVNQSPCDWLLLAEAGDEFTAGGLLRAGL ELASADGCRAVATDEIQRTADGALVDVFRPGFNLDLLQSLPALMARHWLIRREVLIEAGGYQADFSKALEFDLLLRIIEQ GGLDGLAHLDEPLLIAGASVLEENADERQALLRHLGNRGYKAKITSSKPGTYQVDYRHGEQPLVSVIVPAIDDLPALQRC IEGVLLRTRYTRYEVLIAAGPNLSAAVNDWLGTLQHAKVRVLRADQPLGAVALSNAASQQAQGEYLVLMAADGEVVNPNW IESLLNHAQRPEVGVVGAKLVDRDGKIAQAGLILGLNDGVGSAFIGEKHDAEGYMQRLAVDQNYSAVSGICLMIGKALFN ALDGLDDAQFADGFSDVDLCLKAGEAGFLTVWTPLVQVIHSGEVPQAPQALQALREKWSGAFARDTAYNPNLSLSGKGFV LNESASLDWAQLLA
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 107956; Mature: 107956
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGKNSSGHGLALNEQLTVVLISHERPAFLRRAVRFYSTLPCRILVLDSSAEAQPDMLGQ CCCCCCCCCCEEECCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH FANVDYQHLPQYGYWGICAKLAYGVEQLQTPYMVFAADDDFLVHDALHEAVAFMNANPDY HHCCCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC SLCHGYSMMYLSLANSVSYYRRDKKVCEDYSADLAQDRLIDYMYQYLPPFYAVQRTEILR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DWYAAMPQDTIFQWQEVGHTYYMLARGKARILPIPYVVRELNYQHSDHNTEIYHSLAYTD HHHHHCCHHHHHHHHHCCCEEEEEECCCEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHH ARHVAEREAFAGFLAGLPTQVKHQDPEQGKQFVLDSFEALADSLRAGRALTAELVFESAW HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC TDIEAGPQRRFGPKQYVEMPFYNQAFFDQLTQFEFLLHSMPAGRLQLQGLEGIWARQQNL CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCE MLARNNDTPESVVDRLWQAHDSNVFNRQVITRLIDQLQSMGEEEDAQKLRDWIARLQATS EEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC LKGNDQAFGKMRTGRLLEWLAARQPDAGQLEAIAGHLAAHDGGPQFGIFLLDLDNDIDKL CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH QITLDSLLEGHSKAFKVVVFTTGEPPAATTAQNTLHFVRVSPSNFVDKLNLSVNQSPCDW HHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHCCCEECCCCCCE LLLAEAGDEFTAGGLLRAGLELASADGCRAVATDEIQRTADGALVDVFRPGFNLDLLQSL EEEECCCCCCCCCHHHHHCHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHH PALMARHWLIRREVLIEAGGYQADFSKALEFDLLLRIIEQGGLDGLAHLDEPLLIAGASV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEECHHH LEENADERQALLRHLGNRGYKAKITSSKPGTYQVDYRHGEQPLVSVIVPAIDDLPALQRC HHCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHH IEGVLLRTRYTRYEVLIAAGPNLSAAVNDWLGTLQHAKVRVLRADQPLGAVALSNAASQQ HHHHHHHEECCEEEEEEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHC AQGEYLVLMAADGEVVNPNWIESLLNHAQRPEVGVVGAKLVDRDGKIAQAGLILGLNDGV CCCCEEEEEECCCCEECCHHHHHHHHHCCCCCCEEECHHEECCCCCEEECEEEEEECCCC GSAFIGEKHDAEGYMQRLAVDQNYSAVSGICLMIGKALFNALDGLDDAQFADGFSDVDLC CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHH LKAGEAGFLTVWTPLVQVIHSGEVPQAPQALQALREKWSGAFARDTAYNPNLSLSGKGFV HHCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEE LNESASLDWAQLLA EECCCCCCHHHHCC >Mature Secondary Structure MQGKNSSGHGLALNEQLTVVLISHERPAFLRRAVRFYSTLPCRILVLDSSAEAQPDMLGQ CCCCCCCCCCEEECCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHH FANVDYQHLPQYGYWGICAKLAYGVEQLQTPYMVFAADDDFLVHDALHEAVAFMNANPDY HHCCCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC SLCHGYSMMYLSLANSVSYYRRDKKVCEDYSADLAQDRLIDYMYQYLPPFYAVQRTEILR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DWYAAMPQDTIFQWQEVGHTYYMLARGKARILPIPYVVRELNYQHSDHNTEIYHSLAYTD HHHHHCCHHHHHHHHHCCCEEEEEECCCEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHH ARHVAEREAFAGFLAGLPTQVKHQDPEQGKQFVLDSFEALADSLRAGRALTAELVFESAW HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC TDIEAGPQRRFGPKQYVEMPFYNQAFFDQLTQFEFLLHSMPAGRLQLQGLEGIWARQQNL CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCE MLARNNDTPESVVDRLWQAHDSNVFNRQVITRLIDQLQSMGEEEDAQKLRDWIARLQATS EEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC LKGNDQAFGKMRTGRLLEWLAARQPDAGQLEAIAGHLAAHDGGPQFGIFLLDLDNDIDKL CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH QITLDSLLEGHSKAFKVVVFTTGEPPAATTAQNTLHFVRVSPSNFVDKLNLSVNQSPCDW HHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHCCCEECCCCCCE LLLAEAGDEFTAGGLLRAGLELASADGCRAVATDEIQRTADGALVDVFRPGFNLDLLQSL EEEECCCCCCCCCHHHHHCHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHH PALMARHWLIRREVLIEAGGYQADFSKALEFDLLLRIIEQGGLDGLAHLDEPLLIAGASV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEECHHH LEENADERQALLRHLGNRGYKAKITSSKPGTYQVDYRHGEQPLVSVIVPAIDDLPALQRC HHCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHH IEGVLLRTRYTRYEVLIAAGPNLSAAVNDWLGTLQHAKVRVLRADQPLGAVALSNAASQQ HHHHHHHEECCEEEEEEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHC AQGEYLVLMAADGEVVNPNWIESLLNHAQRPEVGVVGAKLVDRDGKIAQAGLILGLNDGV CCCCEEEEEECCCCEECCHHHHHHHHHCCCCCCEEECHHEECCCCCEEECEEEEEECCCC GSAFIGEKHDAEGYMQRLAVDQNYSAVSGICLMIGKALFNALDGLDDAQFADGFSDVDLC CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHH LKAGEAGFLTVWTPLVQVIHSGEVPQAPQALQALREKWSGAFARDTAYNPNLSLSGKGFV HHCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEE LNESASLDWAQLLA EECCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]