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The map label for this gene is scpB [H]

Identifier: 77457717

GI number: 77457717

Start: 1668463

End: 1669476

Strand: Direct

Name: scpB [H]

Synonym: Pfl01_1490

Alternate gene names: 77457717

Gene position: 1668463-1669476 (Clockwise)

Preceding gene: 77457716

Following gene: 77457718

Centisome position: 25.91

GC content: 63.21

Gene sequence:

>1014_bases
ATGAACCTGACTGAACCCCGCGAGCTGGCGTCCCTGCTTGAAGCCTTTCTGTTGGCCTCGGGAAAGCCGCAATCCCTCGA
GCGCCTGTATGAACTGTTCGAAGAAGGCGAACGCCCGGAGCCACCGGTCTTCAAGAAAGCCCTGACCCTGCTTGGCAAAT
CCTGCGAGGGCCGGGCGTTCGAGCTCAAGGAAGTCGCTTCCGGCTATCGTCTGCAAATCCGCGAAAAGTTCGCGCCGTGG
GTCGGTCGTTTGTGGGAAGAGCGCCCGCAGCGCTATTCCCGGGCGCTGCTGGAAACCATGGCGCTGATCGCCTATCGCCA
GCCGATCACCCGGGGCGAGATCGAGGATGTGCGGGGCGTGGCGGTCAACACCAACATCGTCAAGACGCTGATGGAACGTG
AGTGGATCCGCATCGTCGGTTACCGCGACGTGCCGGGCAAACCCGCGATGTTCGCCACCACCAAGGCGTTTCTCGACCAC
TTCAACCTGAAGAACCTTGACGACCTGCCGCCGCTGGCCGAGTTGCGCGAAATCGAGGCAGATCCGGTGCTCGACTTCGA
CGACGCTCCGGTGCCGCCGGGCTTGCAGGAGCTGGCCGACGCCAGCGCCGAGCCGGAGGAGGCGAAGGAGGAAACCAGTT
TCCACACCTTGCTGCTGGAACTGGACAGCATGGAGGAGGGGATCAAGACCGACTTCGACGACTTGCTGCGTGACGGGGCG
GGCGGTGAATCGATGCCGACCGGGGTTGAGTCCGATCCGCTCGAGCCGCCGGTTGAGGGTGAGTTCGAAACTGAATTCGA
GCCTGAACCTGAGTTTGAGCCTGAATTTGAGCCCGAGCAGGAAGACGATGTGCTCGGCGTGGCCGAAGCCCGGGAAAAAC
TGCTCGCTGCCGTCGCCCGGCTGGAACAGCCCGCGCCGGAACCCGCCGCTGAGGAAGAACTGAGCGAAGAAGAAGCCGAA
GCCCGCGCCCTGGCCGAAGCCATCGAAGCCGAACGCCGCGAGTTCGAGGATTGA

Upstream 100 bases:

>100_bases
CCATCCTTGAACTGGTCAAGGAATCCCTGATCGAGCTGGTGCAGAATGAGCCGTTCGCCGCGATCCACGTGCGAGCCCGA
GCCGAATAACGAGTCCCGAT

Downstream 100 bases:

>100_bases
GCATGAGCTCGACCAAAGACCCGTGCATCAGCGTCTGCAAGTTCAGCGACGACATCTGTCTGGGCTGCGGCCGCAGCAAG
CGCGAGATACGGGCCTGGAA

Product: condensin subunit ScpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MNLTEPRELASLLEAFLLASGKPQSLERLYELFEEGERPEPPVFKKALTLLGKSCEGRAFELKEVASGYRLQIREKFAPW
VGRLWEERPQRYSRALLETMALIAYRQPITRGEIEDVRGVAVNTNIVKTLMEREWIRIVGYRDVPGKPAMFATTKAFLDH
FNLKNLDDLPPLAELREIEADPVLDFDDAPVPPGLQELADASAEPEEAKEETSFHTLLLELDSMEEGIKTDFDDLLRDGA
GGESMPTGVESDPLEPPVEGEFETEFEPEPEFEPEFEPEQEDDVLGVAEAREKLLAAVARLEQPAPEPAAEEELSEEEAE
ARALAEAIEAERREFED

Sequences:

>Translated_337_residues
MNLTEPRELASLLEAFLLASGKPQSLERLYELFEEGERPEPPVFKKALTLLGKSCEGRAFELKEVASGYRLQIREKFAPW
VGRLWEERPQRYSRALLETMALIAYRQPITRGEIEDVRGVAVNTNIVKTLMEREWIRIVGYRDVPGKPAMFATTKAFLDH
FNLKNLDDLPPLAELREIEADPVLDFDDAPVPPGLQELADASAEPEEAKEETSFHTLLLELDSMEEGIKTDFDDLLRDGA
GGESMPTGVESDPLEPPVEGEFETEFEPEPEFEPEFEPEQEDDVLGVAEAREKLLAAVARLEQPAPEPAAEEELSEEEAE
ARALAEAIEAERREFED
>Mature_337_residues
MNLTEPRELASLLEAFLLASGKPQSLERLYELFEEGERPEPPVFKKALTLLGKSCEGRAFELKEVASGYRLQIREKFAPW
VGRLWEERPQRYSRALLETMALIAYRQPITRGEIEDVRGVAVNTNIVKTLMEREWIRIVGYRDVPGKPAMFATTKAFLDH
FNLKNLDDLPPLAELREIEADPVLDFDDAPVPPGLQELADASAEPEEAKEETSFHTLLLELDSMEEGIKTDFDDLLRDGA
GGESMPTGVESDPLEPPVEGEFETEFEPEPEFEPEFEPEQEDDVLGVAEAREKLLAAVARLEQPAPEPAAEEELSEEEAE
ARALAEAIEAERREFED

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 37981; Mature: 37981

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTEPRELASLLEAFLLASGKPQSLERLYELFEEGERPEPPVFKKALTLLGKSCEGRAF
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHH
ELKEVASGYRLQIREKFAPWVGRLWEERPQRYSRALLETMALIAYRQPITRGEIEDVRGV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCE
AVNTNIVKTLMEREWIRIVGYRDVPGKPAMFATTKAFLDHFNLKNLDDLPPLAELREIEA
EECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC
DPVLDFDDAPVPPGLQELADASAEPEEAKEETSFHTLLLELDSMEEGIKTDFDDLLRDGA
CCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
GGESMPTGVESDPLEPPVEGEFETEFEPEPEFEPEFEPEQEDDVLGVAEAREKLLAAVAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LEQPAPEPAAEEELSEEEAEARALAEAIEAERREFED
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLTEPRELASLLEAFLLASGKPQSLERLYELFEEGERPEPPVFKKALTLLGKSCEGRAF
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHH
ELKEVASGYRLQIREKFAPWVGRLWEERPQRYSRALLETMALIAYRQPITRGEIEDVRGV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCE
AVNTNIVKTLMEREWIRIVGYRDVPGKPAMFATTKAFLDHFNLKNLDDLPPLAELREIEA
EECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC
DPVLDFDDAPVPPGLQELADASAEPEEAKEETSFHTLLLELDSMEEGIKTDFDDLLRDGA
CCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
GGESMPTGVESDPLEPPVEGEFETEFEPEPEFEPEFEPEQEDDVLGVAEAREKLLAAVAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LEQPAPEPAAEEELSEEEAEARALAEAIEAERREFED
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]