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The map label for this gene is scpA [H]

Identifier: 77457716

GI number: 77457716

Start: 1667633

End: 1668451

Strand: Direct

Name: scpA [H]

Synonym: Pfl01_1489

Alternate gene names: 77457716

Gene position: 1667633-1668451 (Clockwise)

Preceding gene: 77457715

Following gene: 77457717

Centisome position: 25.9

GC content: 63.74

Gene sequence:

>819_bases
ATGTCCGCAGTGGAAACCGTTGATCCCCAGGCCGGTGCCCAGCAGGAACTGCCGTTTGCCATGGTCTATGGCCAGGCCGT
CACGGAAATGCCGCTGGACCTGTACATCCCGCCGGACGCCCTGGAAGTCTTCCTCGAAGCCTTCGAAGGCCCCCTCGACC
TGCTGCTGTACCTGATCCGCAAACAGAACATCAACATCCTCGACATCCCGGTGGCGGAAATCACCCGCCAGTACATGGGT
TATGTCGAGCTGATGCAGTCGGTGCGCCTGGAACTGGCCGCCGAGTATCTGGTGATGGCCGCGATGCTGGCCGAGATCAA
GTCGCGGATGCTGCTGCCCCGGGCCGAAACCGTCGAGGACGAAGAGGACGACCCGCGCGCCGAACTGATCCGCCGTCTGC
AGGAGTACGAACGGTTCAAGGCCGCTGCCGAGGGCATCGATGGCCTGAGTCGGGTCGGCCGCGATGTGATCGTGCCCAAG
CTCGACGCCCCGGAAGCCCGCGCGCGCAAGCTGTTGCCGGACGTGGCGCTGGAAGAAATCCTGATGTCCATGGCCGAAGT
GCTACGCCGCGGCGACATGTTCGAAAGCCATCAGGTCAGCCGCGAGGCGCTGTCCACCCGCGAGCGCATGAGCGACGTGC
TGGAGCGGCTCAAGGGCGGCGGGTTTGTGCCGTTCATCGAGCTGTTCACCGCCGAAGAGGGCAAGCTCGGCGTGGTGGTG
ACCTTCATGGCCATCCTTGAACTGGTCAAGGAATCCCTGATCGAGCTGGTGCAGAATGAGCCGTTCGCCGCGATCCACGT
GCGAGCCCGAGCCGAATAA

Upstream 100 bases:

>100_bases
CGGCATCAAGGCCTCCACCGTGATCGACCTGACCGGCGATGATCCGGAAGTGATCCGCGTCGGTTGCGGCGACCCGGCTC
CATTCATGGTCGAGGCCTGA

Downstream 100 bases:

>100_bases
CGAGTCCCGATATGAACCTGACTGAACCCCGCGAGCTGGCGTCCCTGCTTGAAGCCTTTCTGTTGGCCTCGGGAAAGCCG
CAATCCCTCGAGCGCCTGTA

Product: condensin subunit ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSAVETVDPQAGAQQELPFAMVYGQAVTEMPLDLYIPPDALEVFLEAFEGPLDLLLYLIRKQNINILDIPVAEITRQYMG
YVELMQSVRLELAAEYLVMAAMLAEIKSRMLLPRAETVEDEEDDPRAELIRRLQEYERFKAAAEGIDGLSRVGRDVIVPK
LDAPEARARKLLPDVALEEILMSMAEVLRRGDMFESHQVSREALSTRERMSDVLERLKGGGFVPFIELFTAEEGKLGVVV
TFMAILELVKESLIELVQNEPFAAIHVRARAE

Sequences:

>Translated_272_residues
MSAVETVDPQAGAQQELPFAMVYGQAVTEMPLDLYIPPDALEVFLEAFEGPLDLLLYLIRKQNINILDIPVAEITRQYMG
YVELMQSVRLELAAEYLVMAAMLAEIKSRMLLPRAETVEDEEDDPRAELIRRLQEYERFKAAAEGIDGLSRVGRDVIVPK
LDAPEARARKLLPDVALEEILMSMAEVLRRGDMFESHQVSREALSTRERMSDVLERLKGGGFVPFIELFTAEEGKLGVVV
TFMAILELVKESLIELVQNEPFAAIHVRARAE
>Mature_271_residues
SAVETVDPQAGAQQELPFAMVYGQAVTEMPLDLYIPPDALEVFLEAFEGPLDLLLYLIRKQNINILDIPVAEITRQYMGY
VELMQSVRLELAAEYLVMAAMLAEIKSRMLLPRAETVEDEEDDPRAELIRRLQEYERFKAAAEGIDGLSRVGRDVIVPKL
DAPEARARKLLPDVALEEILMSMAEVLRRGDMFESHQVSREALSTRERMSDVLERLKGGGFVPFIELFTAEEGKLGVVVT
FMAILELVKESLIELVQNEPFAAIHVRARAE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30634; Mature: 30503

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVETVDPQAGAQQELPFAMVYGQAVTEMPLDLYIPPDALEVFLEAFEGPLDLLLYLIR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCHHHHHHHHHH
KQNINILDIPVAEITRQYMGYVELMQSVRLELAAEYLVMAAMLAEIKSRMLLPRAETVED
HCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
EEDDPRAELIRRLQEYERFKAAAEGIDGLSRVGRDVIVPKLDAPEARARKLLPDVALEEI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LMSMAEVLRRGDMFESHQVSREALSTRERMSDVLERLKGGGFVPFIELFTAEEGKLGVVV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHH
TFMAILELVKESLIELVQNEPFAAIHVRARAE
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
>Mature Secondary Structure 
SAVETVDPQAGAQQELPFAMVYGQAVTEMPLDLYIPPDALEVFLEAFEGPLDLLLYLIR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCHHHHHHHHHH
KQNINILDIPVAEITRQYMGYVELMQSVRLELAAEYLVMAAMLAEIKSRMLLPRAETVED
HCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
EEDDPRAELIRRLQEYERFKAAAEGIDGLSRVGRDVIVPKLDAPEARARKLLPDVALEEI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LMSMAEVLRRGDMFESHQVSREALSTRERMSDVLERLKGGGFVPFIELFTAEEGKLGVVV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHH
TFMAILELVKESLIELVQNEPFAAIHVRARAE
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]