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The map label for this gene is lumQ [H]

Identifier: 77457701

GI number: 77457701

Start: 1655934

End: 1656698

Strand: Reverse

Name: lumQ [H]

Synonym: Pfl01_1474

Alternate gene names: 77457701

Gene position: 1656698-1655934 (Counterclockwise)

Preceding gene: 77457703

Following gene: 77457700

Centisome position: 25.73

GC content: 64.97

Gene sequence:

>765_bases
ATGCACCCGATCCTGACCCTGCGCCATTACAGCCACGACCTGATCGCCCACAGCCACGACCACGCGCAACTGGTGTTCGG
CCTGTCAGGCGCGCTGGATTTCGAAGTCGAAGGGCGTGGCAGTCAGGTATTGCAGCAGAGCTTCGTGGTGATCCCCGCCG
GCGCGCATCACGCGTGCGGCAGCCCCAAGGGCAGCCGCTGTCTGGTGCTGGATGTGCCGGACGAACAATGGCTGGAGCGC
TCGCTGGGCAATCACGCCGATGCCAGCCGCCGCCTGCTGGACAACGCCGCCCGATTGTCGCTGGATGCCGGGCAAGGTCA
ACTGGTCAACTGGCTGGCGAACAGTCCGGTGGACGACCCGTTGATTGCGCAACAAGGCGCGGTGTTGCTGCTGGCGAGCC
TGAACCACGTGCCACCCGTCGAGATCGTCGCGCGCCGCCTGCCCTACGCGGCACTCGATGCGCACATCGAGCAGTACGCG
GCCTATCCGCTGCAAGTCGCGGATCTGGCGCGCGTCGCCGGATTATCCAGCGCCCGGCTGCATGCGCGGTTCGTCGCTGA
ATGCGGGCAGACACCGATGGACTACATTCGCAGTCGCCGGCTGCATAAAGCCGTGGCGCTGTTGCGCAACACCACGCTGC
CCATCGGTGAAGTGGCCAGCCGTGTCGGCTACAACTCGCAAAGCGCATTTTCGGCCGCCGTCCTGCGTGAGTTCGGCACC
TCTCCTACACAATTGCGACGCGAGGCTGACGACAAAAGTCGATAG

Upstream 100 bases:

>100_bases
GCGCGCCCGGTTAATCGACCATGACAGGTGTGCGTCAGTCGTGTGACAAAGGCGTCGCCCCCTGCGCCGGTGTAGACTGG
CGGCTCGCCCGGAGACCACC

Downstream 100 bases:

>100_bases
CCTGCCGAAAGACTTTTGCGTCGTGACACGCTTCAATGTGTGTCTGTAATGGTGTTTGGAAAAAGGACTGCAATGACTCC
TCGTACCGCCCTCGGCGCCC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MHPILTLRHYSHDLIAHSHDHAQLVFGLSGALDFEVEGRGSQVLQQSFVVIPAGAHHACGSPKGSRCLVLDVPDEQWLER
SLGNHADASRRLLDNAARLSLDAGQGQLVNWLANSPVDDPLIAQQGAVLLLASLNHVPPVEIVARRLPYAALDAHIEQYA
AYPLQVADLARVAGLSSARLHARFVAECGQTPMDYIRSRRLHKAVALLRNTTLPIGEVASRVGYNSQSAFSAAVLREFGT
SPTQLRREADDKSR

Sequences:

>Translated_254_residues
MHPILTLRHYSHDLIAHSHDHAQLVFGLSGALDFEVEGRGSQVLQQSFVVIPAGAHHACGSPKGSRCLVLDVPDEQWLER
SLGNHADASRRLLDNAARLSLDAGQGQLVNWLANSPVDDPLIAQQGAVLLLASLNHVPPVEIVARRLPYAALDAHIEQYA
AYPLQVADLARVAGLSSARLHARFVAECGQTPMDYIRSRRLHKAVALLRNTTLPIGEVASRVGYNSQSAFSAAVLREFGT
SPTQLRREADDKSR
>Mature_254_residues
MHPILTLRHYSHDLIAHSHDHAQLVFGLSGALDFEVEGRGSQVLQQSFVVIPAGAHHACGSPKGSRCLVLDVPDEQWLER
SLGNHADASRRLLDNAARLSLDAGQGQLVNWLANSPVDDPLIAQQGAVLLLASLNHVPPVEIVARRLPYAALDAHIEQYA
AYPLQVADLARVAGLSSARLHARFVAECGQTPMDYIRSRRLHKAVALLRNTTLPIGEVASRVGYNSQSAFSAAVLREFGT
SPTQLRREADDKSR

Specific function: Probable transcriptional regulator. Its target gene(s) is not yet known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 2500 (L-broth) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 27645; Mature: 27645

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPILTLRHYSHDLIAHSHDHAQLVFGLSGALDFEVEGRGSQVLQQSFVVIPAGAHHACG
CCCEEEHHHCCHHHHHCCCCCCEEEEECCCEEEEEECCCHHHHHHHCCEEEECCCCCCCC
SPKGSRCLVLDVPDEQWLERSLGNHADASRRLLDNAARLSLDAGQGQLVNWLANSPVDDP
CCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCCC
LIAQQGAVLLLASLNHVPPVEIVARRLPYAALDAHIEQYAAYPLQVADLARVAGLSSARL
HHHHCCCEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH
HARFVAECGQTPMDYIRSRRLHKAVALLRNTTLPIGEVASRVGYNSQSAFSAAVLREFGT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCC
SPTQLRREADDKSR
CHHHHHHHHHCCCC
>Mature Secondary Structure
MHPILTLRHYSHDLIAHSHDHAQLVFGLSGALDFEVEGRGSQVLQQSFVVIPAGAHHACG
CCCEEEHHHCCHHHHHCCCCCCEEEEECCCEEEEEECCCHHHHHHHCCEEEECCCCCCCC
SPKGSRCLVLDVPDEQWLERSLGNHADASRRLLDNAARLSLDAGQGQLVNWLANSPVDDP
CCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCCC
LIAQQGAVLLLASLNHVPPVEIVARRLPYAALDAHIEQYAAYPLQVADLARVAGLSSARL
HHHHCCCEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH
HARFVAECGQTPMDYIRSRRLHKAVALLRNTTLPIGEVASRVGYNSQSAFSAAVLREFGT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCC
SPTQLRREADDKSR
CHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7503752 [H]