| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yijE [C]
Identifier: 77457700
GI number: 77457700
Start: 1654968
End: 1655861
Strand: Reverse
Name: yijE [C]
Synonym: Pfl01_1473
Alternate gene names: 77457700
Gene position: 1655861-1654968 (Counterclockwise)
Preceding gene: 77457701
Following gene: 77457698
Centisome position: 25.72
GC content: 65.32
Gene sequence:
>894_bases ATGACTCCTCGTACCGCCCTCGGCGCCCTGCATATCGGCGCACTGATGTTCGGCCTGACCGGCGTCTTCGGCAAACTCGC GGCCGCAACGCCTGCCGTCATCGTGTTCGGACGCGCCGCGTTTGCCGTGCTGGCCCTGGCGTTTTTCGCCCGCTTCGCCC AACAGGGCGGCTGGCAGAAACTGCAGGCCGTCGACTGGCGACGACTGGCTCTGAGCGGCGTGCTGCTGGCCGGACACTGG GTGAGTTTCTTCATTGCGGTCAAGGTCGCGGGCGTCGCCATTGCGACCTTGGGTTTCGCCAGTTTCCCGGCCTTCACGGT GATCCTCGAAGGGCTGATCTTCCGCGAACGCATCCGCGCCAATGAAATCGTGCTGGTAGCGTTGGTCAGTATCGGGCTGG TGCTGGTGACCCCGGCGTTCGATCTGGCCAGCGGCGCGACCACGGGCCTGCTCTGGGCGATCCTGTCCGGCCTGCTGTTT TCGCTGTTGTCGCTGACCAACCGCGCCAGCTCCGGGCGCATCCCGGCGGTGCAGGCGGCGCTGTGTCAGAACGTGGTGGT GGCGTTGTGTCTGCTGCCGGTGGCGGCGCCGCAACTGAGCGAAGTGCGCGCCATCGACTGGTTGTGGATCGGTCTGCTCG GGGTGTTCTGCACCGGCGTCGCCCACAGTTTGTTCGTTGCCAGCCTCGCGGTAATCAAGGCGCGCACCGCTGCGGTAGTG TTCGCCATGGAGCCGGTGTACGGGATTACCGTGGCCTGGCTGCTGTTCGATGAAGATCCGACCTTGCGCATGCTGATCGG CGGCGCGCTGATCATCGTCGCGATCGTGGTGTCGAGCCGGATGTCAGGCAGCAACGACAAGAAAACCGTCGCGGCCGAAG CGGCTTCTCACTGA
Upstream 100 bases:
>100_bases ACGCGAGGCTGACGACAAAAGTCGATAGCCTGCCGAAAGACTTTTGCGTCGTGACACGCTTCAATGTGTGTCTGTAATGG TGTTTGGAAAAAGGACTGCA
Downstream 100 bases:
>100_bases GTACGGTCGTTGTGGCCGAGGTCGCGGTCCGGGTCGATCTGGTCGCGCACCCGCTGCTTGAGCACCTTGGCTTCGGGGAA GCCGCCGTCGGCCTTGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTPRTALGALHIGALMFGLTGVFGKLAAATPAVIVFGRAAFAVLALAFFARFAQQGGWQKLQAVDWRRLALSGVLLAGHW VSFFIAVKVAGVAIATLGFASFPAFTVILEGLIFRERIRANEIVLVALVSIGLVLVTPAFDLASGATTGLLWAILSGLLF SLLSLTNRASSGRIPAVQAALCQNVVVALCLLPVAAPQLSEVRAIDWLWIGLLGVFCTGVAHSLFVASLAVIKARTAAVV FAMEPVYGITVAWLLFDEDPTLRMLIGGALIIVAIVVSSRMSGSNDKKTVAAEAASH
Sequences:
>Translated_297_residues MTPRTALGALHIGALMFGLTGVFGKLAAATPAVIVFGRAAFAVLALAFFARFAQQGGWQKLQAVDWRRLALSGVLLAGHW VSFFIAVKVAGVAIATLGFASFPAFTVILEGLIFRERIRANEIVLVALVSIGLVLVTPAFDLASGATTGLLWAILSGLLF SLLSLTNRASSGRIPAVQAALCQNVVVALCLLPVAAPQLSEVRAIDWLWIGLLGVFCTGVAHSLFVASLAVIKARTAAVV FAMEPVYGITVAWLLFDEDPTLRMLIGGALIIVAIVVSSRMSGSNDKKTVAAEAASH >Mature_296_residues TPRTALGALHIGALMFGLTGVFGKLAAATPAVIVFGRAAFAVLALAFFARFAQQGGWQKLQAVDWRRLALSGVLLAGHWV SFFIAVKVAGVAIATLGFASFPAFTVILEGLIFRERIRANEIVLVALVSIGLVLVTPAFDLASGATTGLLWAILSGLLFS LLSLTNRASSGRIPAVQAALCQNVVVALCLLPVAAPQLSEVRAIDWLWIGLLGVFCTGVAHSLFVASLAVIKARTAAVVF AMEPVYGITVAWLLFDEDPTLRMLIGGALIIVAIVVSSRMSGSNDKKTVAAEAASH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31094; Mature: 30963
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: PS00089 RIBORED_LARGE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRTALGALHIGALMFGLTGVFGKLAAATPAVIVFGRAAFAVLALAFFARFAQQGGWQK CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LQAVDWRRLALSGVLLAGHWVSFFIAVKVAGVAIATLGFASFPAFTVILEGLIFRERIRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NEIVLVALVSIGLVLVTPAFDLASGATTGLLWAILSGLLFSLLSLTNRASSGRIPAVQAA CHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LCQNVVVALCLLPVAAPQLSEVRAIDWLWIGLLGVFCTGVAHSLFVASLAVIKARTAAVV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE FAMEPVYGITVAWLLFDEDPTLRMLIGGALIIVAIVVSSRMSGSNDKKTVAAEAASH EEECCHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCC >Mature Secondary Structure TPRTALGALHIGALMFGLTGVFGKLAAATPAVIVFGRAAFAVLALAFFARFAQQGGWQK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LQAVDWRRLALSGVLLAGHWVSFFIAVKVAGVAIATLGFASFPAFTVILEGLIFRERIRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NEIVLVALVSIGLVLVTPAFDLASGATTGLLWAILSGLLFSLLSLTNRASSGRIPAVQAA CHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LCQNVVVALCLLPVAAPQLSEVRAIDWLWIGLLGVFCTGVAHSLFVASLAVIKARTAAVV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE FAMEPVYGITVAWLLFDEDPTLRMLIGGALIIVAIVVSSRMSGSNDKKTVAAEAASH EEECCHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA