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The map label for this gene is ylbK [H]

Identifier: 77457698

GI number: 77457698

Start: 1652414

End: 1654615

Strand: Reverse

Name: ylbK [H]

Synonym: Pfl01_1471

Alternate gene names: 77457698

Gene position: 1654615-1652414 (Counterclockwise)

Preceding gene: 77457700

Following gene: 77457694

Centisome position: 25.7

GC content: 62.76

Gene sequence:

>2202_bases
ATGCGTCGTCTGCTGATCTGCCTGTTGCTTGGTTTCCTTCCCCTGTTCGCTGGTGTCAGCGTCCATGCCAGTGAGGCCAC
ACGCCCGAAAGTCGGCCTGGTGCTGTCCGGCGGCGCGGCCCGTGGACTGGCGCACATCGGTGTGCTCAAGGCCTTGGAAG
AGCAAGGCATCAAGATCGATGCGATTGCCGGCACCAGCATGGGCGCGGTGGTCGGCGGGCTGTATGCCTCGGGCTACAAG
ATCGACGAGCTGGAAAAACTCGCCCTGACCATCGACTGGCAGCAGGCGCTGTCCGACGCCCCGCCCCGTGAAGACGTACC
GTTCCGGCGCAAGCAGGACGACCGCGACTTTCTGGTGAAACAGAAACTGAGCTTTCGTGACGATGGCAGCCTCGGCCTGC
CATTGGGCGTGATTCAAGGCCAGAACCTCGCGCTGCTGCTGGAAAGCCTGCTGGCCCACACCAGCGACACCCGGGATTTC
GACAAGCTGCCGATCCCGTTTCGCGCCGTGACCACCGATATCGACAACGGCGAAAAAGTGGTGTTCCGCAAGGGCCACCT
GCCGCAGGTGATCCGCGCCAGCATGTCGATCCCGGCGGTGTTCGCCCCGGTCGAACTCGACGGCCGATTGCTGGTGGATG
GCGGCATGACCGACAACATTCCTCTCGATGTGGCCCGTGAAATGGGCGTCGACGTGGCCATCGTGGTCGACATCGGCACC
CCGCTGCGCAACCGCAAGCAACTGGTGACCGTGGTCGATGTGCTGAACCAGTCAATCACCCTGATGACACGGCGCAACTC
CGAAGAGCAACTGGCGACCCTGCATCCCGATGACGTGCTGATCCAGCCGCCGCTGGCCAGTTTCGGCGCCACCGACTTCG
GTCGCGGCCAGGAGATGATCGACGCCGGCTACCGCGCGACCCAGGCTCTGGACGTGCGCCTCGCCCGCCTCAAACCCGCG
CAATCGCAGGACGCCGAGCTCAACGCCGCCCGCGCGCCAGGCCAGCGCACACCGATCATCACCGCGATCAAGGTCGAGAA
CGACTCGAAAGTCGGCGATGACGTGATCCGCTATTACATCCGCCAGCACATCGGTGAACCGCTGGACCTGGGTCGCCTGC
AAACCGACATGGGCACCCTGTACGGCCTCGATTACTTCGAGCAGGTGCAATACCGCGTGGTGCACAAGGGATCGGATCAC
ACGCTGGTGATCAGCGCGCGGGGTAAACGTACTGGCACGGATTACCTGCGAGTCGGCCTCAACCTGTCGGATGACATGCG
CGGCGACAGCGCCTTCAACCTCGGTGCCAGTTACCGCGTGAACGGCATCAACCGGCTCGGCGCGGAATGGCTGACCCGGG
CGCAGATCGGCGATAAACAAGAGTTGTACAGCGAGTTCTATCAGCCGCTGGACGTGGGCTCTCGCTACTTTTTGGCGCCT
TATGCGTCGTTTGCCGCACAGAACGTCGACTCGGTGCTGGACAACGATCCGATTGCCCAGTATCGCGTCGAGCGCTACGG
CTTCGGCCTCAATGTTGGTCGGCAGATCGGCAACAGCGGTGAAGTGCGCTTCGGGGTCGGCGAGGCCTGGGGCAAGGCGG
ATGTGCGGATCGGCGACCAGGATCTGCCGAGCGAAAGTTTCAACGAAGGGTTCTACGCGTTGAAGTATTCCTTCGACTCG
CTGGACAACGTCTACTTCCCCCACGAGGGCGAAGACATCGGCCTGACCCTGGTTCAGTTCGAACCGAGCCTGGGTTCCGA
CACACGCTACCGGCAGTGGGAGTTCAAACTGGACAAGGCCATGAGCAGTGGACCTGACACGCTGATTCTGGGTGGTCGTT
ACGGCCGCACGCTGGACGATGCCAACGTGGTGACCTCCAGTTTCCTGCTCGGCGGCGCCCGGCAATTGTCCGGTTTCCGC
GAAGACGCGATCTCCGGGCAGAACGTCAGTCTGATGCGGGCGGTGTATTACCGCCGCCTCACTCCACGCTCCTACCTGCC
GCTGGACTTCCCGTTGTACGCCGGTGCGTCACTGGAACGCGGCCGGGCCTGGAACAACGACAATGAGTTCGACAGCGGCT
ACATCAACGCCGCCAGCGTGTTCATCGGCTTCGATACGCCGCTGGGGCCGCTGAATTTCAGCTATGGCCTGAACGATGCG
GATGAACAGGCGGTGTACCTGAACCTCGGGCAGACCTTCTGA

Upstream 100 bases:

>100_bases
ATGACGATTTCCGGTTTTGTGACGGTCATGATTGCTGAAACTCCTGAGCCAGAGGGCGCCGCTATAATAGCCGGCTTTAT
CGCTCGCCCCGAGACTCACG

Downstream 100 bases:

>100_bases
AGGCGGTCAGCGAATCCCCGCCAACAGCGTGCGCGCCGTTTGCTTGAGGGGTTCGTCGGCTTCCTTGAGCAGTTCGTTGA
GCAAGGCAATGGCGCTGTCG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 733; Mature: 733

Protein sequence:

>733_residues
MRRLLICLLLGFLPLFAGVSVHASEATRPKVGLVLSGGAARGLAHIGVLKALEEQGIKIDAIAGTSMGAVVGGLYASGYK
IDELEKLALTIDWQQALSDAPPREDVPFRRKQDDRDFLVKQKLSFRDDGSLGLPLGVIQGQNLALLLESLLAHTSDTRDF
DKLPIPFRAVTTDIDNGEKVVFRKGHLPQVIRASMSIPAVFAPVELDGRLLVDGGMTDNIPLDVAREMGVDVAIVVDIGT
PLRNRKQLVTVVDVLNQSITLMTRRNSEEQLATLHPDDVLIQPPLASFGATDFGRGQEMIDAGYRATQALDVRLARLKPA
QSQDAELNAARAPGQRTPIITAIKVENDSKVGDDVIRYYIRQHIGEPLDLGRLQTDMGTLYGLDYFEQVQYRVVHKGSDH
TLVISARGKRTGTDYLRVGLNLSDDMRGDSAFNLGASYRVNGINRLGAEWLTRAQIGDKQELYSEFYQPLDVGSRYFLAP
YASFAAQNVDSVLDNDPIAQYRVERYGFGLNVGRQIGNSGEVRFGVGEAWGKADVRIGDQDLPSESFNEGFYALKYSFDS
LDNVYFPHEGEDIGLTLVQFEPSLGSDTRYRQWEFKLDKAMSSGPDTLILGGRYGRTLDDANVVTSSFLLGGARQLSGFR
EDAISGQNVSLMRAVYYRRLTPRSYLPLDFPLYAGASLERGRAWNNDNEFDSGYINAASVFIGFDTPLGPLNFSYGLNDA
DEQAVYLNLGQTF

Sequences:

>Translated_733_residues
MRRLLICLLLGFLPLFAGVSVHASEATRPKVGLVLSGGAARGLAHIGVLKALEEQGIKIDAIAGTSMGAVVGGLYASGYK
IDELEKLALTIDWQQALSDAPPREDVPFRRKQDDRDFLVKQKLSFRDDGSLGLPLGVIQGQNLALLLESLLAHTSDTRDF
DKLPIPFRAVTTDIDNGEKVVFRKGHLPQVIRASMSIPAVFAPVELDGRLLVDGGMTDNIPLDVAREMGVDVAIVVDIGT
PLRNRKQLVTVVDVLNQSITLMTRRNSEEQLATLHPDDVLIQPPLASFGATDFGRGQEMIDAGYRATQALDVRLARLKPA
QSQDAELNAARAPGQRTPIITAIKVENDSKVGDDVIRYYIRQHIGEPLDLGRLQTDMGTLYGLDYFEQVQYRVVHKGSDH
TLVISARGKRTGTDYLRVGLNLSDDMRGDSAFNLGASYRVNGINRLGAEWLTRAQIGDKQELYSEFYQPLDVGSRYFLAP
YASFAAQNVDSVLDNDPIAQYRVERYGFGLNVGRQIGNSGEVRFGVGEAWGKADVRIGDQDLPSESFNEGFYALKYSFDS
LDNVYFPHEGEDIGLTLVQFEPSLGSDTRYRQWEFKLDKAMSSGPDTLILGGRYGRTLDDANVVTSSFLLGGARQLSGFR
EDAISGQNVSLMRAVYYRRLTPRSYLPLDFPLYAGASLERGRAWNNDNEFDSGYINAASVFIGFDTPLGPLNFSYGLNDA
DEQAVYLNLGQTF
>Mature_733_residues
MRRLLICLLLGFLPLFAGVSVHASEATRPKVGLVLSGGAARGLAHIGVLKALEEQGIKIDAIAGTSMGAVVGGLYASGYK
IDELEKLALTIDWQQALSDAPPREDVPFRRKQDDRDFLVKQKLSFRDDGSLGLPLGVIQGQNLALLLESLLAHTSDTRDF
DKLPIPFRAVTTDIDNGEKVVFRKGHLPQVIRASMSIPAVFAPVELDGRLLVDGGMTDNIPLDVAREMGVDVAIVVDIGT
PLRNRKQLVTVVDVLNQSITLMTRRNSEEQLATLHPDDVLIQPPLASFGATDFGRGQEMIDAGYRATQALDVRLARLKPA
QSQDAELNAARAPGQRTPIITAIKVENDSKVGDDVIRYYIRQHIGEPLDLGRLQTDMGTLYGLDYFEQVQYRVVHKGSDH
TLVISARGKRTGTDYLRVGLNLSDDMRGDSAFNLGASYRVNGINRLGAEWLTRAQIGDKQELYSEFYQPLDVGSRYFLAP
YASFAAQNVDSVLDNDPIAQYRVERYGFGLNVGRQIGNSGEVRFGVGEAWGKADVRIGDQDLPSESFNEGFYALKYSFDS
LDNVYFPHEGEDIGLTLVQFEPSLGSDTRYRQWEFKLDKAMSSGPDTLILGGRYGRTLDDANVVTSSFLLGGARQLSGFR
EDAISGQNVSLMRAVYYRRLTPRSYLPLDFPLYAGASLERGRAWNNDNEFDSGYINAASVFIGFDTPLGPLNFSYGLNDA
DEQAVYLNLGQTF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=299, Percent_Identity=31.7725752508361, Blast_Score=115, Evalue=2e-25,
Organism=Homo sapiens, GI148727290, Length=299, Percent_Identity=31.7725752508361, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI260656039, Length=308, Percent_Identity=28.8961038961039, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI260656043, Length=308, Percent_Identity=28.8961038961039, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI260656041, Length=308, Percent_Identity=28.8961038961039, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI116256487, Length=308, Percent_Identity=28.8961038961039, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI260656037, Length=308, Percent_Identity=28.8961038961039, Blast_Score=110, Evalue=6e-24,
Organism=Escherichia coli, GI226510936, Length=317, Percent_Identity=27.7602523659306, Blast_Score=114, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI71997289, Length=284, Percent_Identity=26.7605633802817, Blast_Score=82, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71997299, Length=284, Percent_Identity=26.7605633802817, Blast_Score=82, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6323581, Length=51, Percent_Identity=60.7843137254902, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 80689; Mature: 80689

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLICLLLGFLPLFAGVSVHASEATRPKVGLVLSGGAARGLAHIGVLKALEEQGIKID
CHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEE
AIAGTSMGAVVGGLYASGYKIDELEKLALTIDWQQALSDAPPREDVPFRRKQDDRDFLVK
EECCCCHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHH
QKLSFRDDGSLGLPLGVIQGQNLALLLESLLAHTSDTRDFDKLPIPFRAVTTDIDNGEKV
HHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCEE
VFRKGHLPQVIRASMSIPAVFAPVELDGRLLVDGGMTDNIPLDVAREMGVDVAIVVDIGT
EEECCCCHHHHHHHCCCCEEEEEEEECCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCC
PLRNRKQLVTVVDVLNQSITLMTRRNSEEQLATLHPDDVLIQPPLASFGATDFGRGQEMI
CCCCHHHHHHHHHHHCCCEEEEEECCCHHHEEEECCCCEEECCCHHHCCCCCCCCCHHHH
DAGYRATQALDVRLARLKPAQSQDAELNAARAPGQRTPIITAIKVENDSKVGDDVIRYYI
HHCCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHH
RQHIGEPLDLGRLQTDMGTLYGLDYFEQVQYRVVHKGSDHTLVISARGKRTGTDYLRVGL
HHHCCCCCCCCHHHHHHHHHHCCHHHHHHHEEEEECCCCCEEEEEECCCCCCCCEEEEEC
NLSDDMRGDSAFNLGASYRVNGINRLGAEWLTRAQIGDKQELYSEFYQPLDVGSRYFLAP
CCCCCCCCCCEEECCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHCCCEEEEHH
YASFAAQNVDSVLDNDPIAQYRVERYGFGLNVGRQIGNSGEVRFGVGEAWGKADVRIGDQ
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCCCCCEEECCC
DLPSESFNEGFYALKYSFDSLDNVYFPHEGEDIGLTLVQFEPSLGSDTRYRQWEFKLDKA
CCCCCHHCCCEEEEEEECCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEHHHH
MSSGPDTLILGGRYGRTLDDANVVTSSFLLGGARQLSGFREDAISGQNVSLMRAVYYRRL
HCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCHHHHCCHHHHHCCCCCHHHHHHHHHHHC
TPRSYLPLDFPLYAGASLERGRAWNNDNEFDSGYINAASVFIGFDTPLGPLNFSYGLNDA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEECCCCCCC
DEQAVYLNLGQTF
CCCEEEEECCCCC
>Mature Secondary Structure
MRRLLICLLLGFLPLFAGVSVHASEATRPKVGLVLSGGAARGLAHIGVLKALEEQGIKID
CHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEE
AIAGTSMGAVVGGLYASGYKIDELEKLALTIDWQQALSDAPPREDVPFRRKQDDRDFLVK
EECCCCHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHH
QKLSFRDDGSLGLPLGVIQGQNLALLLESLLAHTSDTRDFDKLPIPFRAVTTDIDNGEKV
HHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCEE
VFRKGHLPQVIRASMSIPAVFAPVELDGRLLVDGGMTDNIPLDVAREMGVDVAIVVDIGT
EEECCCCHHHHHHHCCCCEEEEEEEECCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCC
PLRNRKQLVTVVDVLNQSITLMTRRNSEEQLATLHPDDVLIQPPLASFGATDFGRGQEMI
CCCCHHHHHHHHHHHCCCEEEEEECCCHHHEEEECCCCEEECCCHHHCCCCCCCCCHHHH
DAGYRATQALDVRLARLKPAQSQDAELNAARAPGQRTPIITAIKVENDSKVGDDVIRYYI
HHCCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHH
RQHIGEPLDLGRLQTDMGTLYGLDYFEQVQYRVVHKGSDHTLVISARGKRTGTDYLRVGL
HHHCCCCCCCCHHHHHHHHHHCCHHHHHHHEEEEECCCCCEEEEEECCCCCCCCEEEEEC
NLSDDMRGDSAFNLGASYRVNGINRLGAEWLTRAQIGDKQELYSEFYQPLDVGSRYFLAP
CCCCCCCCCCEEECCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHCCCEEEEHH
YASFAAQNVDSVLDNDPIAQYRVERYGFGLNVGRQIGNSGEVRFGVGEAWGKADVRIGDQ
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCCCCCEEECCC
DLPSESFNEGFYALKYSFDSLDNVYFPHEGEDIGLTLVQFEPSLGSDTRYRQWEFKLDKA
CCCCCHHCCCEEEEEEECCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEHHHH
MSSGPDTLILGGRYGRTLDDANVVTSSFLLGGARQLSGFREDAISGQNVSLMRAVYYRRL
HCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCHHHHCCHHHHHCCCCCHHHHHHHHHHHC
TPRSYLPLDFPLYAGASLERGRAWNNDNEFDSGYINAASVFIGFDTPLGPLNFSYGLNDA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEECCCCCCC
DEQAVYLNLGQTF
CCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]