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The map label for this gene is slyA [H]

Identifier: 77457696

GI number: 77457696

Start: 1650058

End: 1650492

Strand: Direct

Name: slyA [H]

Synonym: Pfl01_1469

Alternate gene names: 77457696

Gene position: 1650058-1650492 (Clockwise)

Preceding gene: 77457695

Following gene: 77457697

Centisome position: 25.63

GC content: 62.07

Gene sequence:

>435_bases
ATGCCGTTAACCGATCAACACCGTTTTGGCATGCAATTGGCCCAGATGTCCCGTGGCTGGCGTGCCGAACTGGATCGCCG
GCTGGCTGGCCTGGGCCTGTCCCAGGCACGCTGGCTGGTGCTGCTGCATCTGGCGCGTTTCGAAGAGGCGCCGACCCAGC
GGGAGCTGGCGCAGAGCGTCGGCGTCGAAGGGCCGACCCTGGCTCGTCTGCTCGACAGTCTGGAAAGCCAGGGCCTGGTG
CAACGCCAGTCCGTGATGGAAGACCGCCGGGCGAAAAAAATCGTGCTGTGCTCACCGGCGCTGCCGCTGATCGAACAGAT
CGAAACCATTGCCACGCAACTGCGCAAGGAATTGTTCGAAGGCGTCGACGAGGCGGATCTGAAGGTCTGTATGCGGGTTC
ACGGGCACATTCTGGCCAATCTGGAAAAGTCTTGA

Upstream 100 bases:

>100_bases
CGATTCAGTACAGGACGCCTCTTGCCTATAGGCAAATGTCATGCTTAGCTGACTAATAATTAGTTTTTCTCTATTTGTTA
AGTCTACTCATGAGTGTTTT

Downstream 100 bases:

>100_bases
GGCACAACCGCGTGCCGTTTTTTTGAGAGATCGCGCTGGGCAGACTATAAGAACTACTGGGCAATATCGTGTTCGTACCG
GATGTGCGAACGCATAGAAG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MPLTDQHRFGMQLAQMSRGWRAELDRRLAGLGLSQARWLVLLHLARFEEAPTQRELAQSVGVEGPTLARLLDSLESQGLV
QRQSVMEDRRAKKIVLCSPALPLIEQIETIATQLRKELFEGVDEADLKVCMRVHGHILANLEKS

Sequences:

>Translated_144_residues
MPLTDQHRFGMQLAQMSRGWRAELDRRLAGLGLSQARWLVLLHLARFEEAPTQRELAQSVGVEGPTLARLLDSLESQGLV
QRQSVMEDRRAKKIVLCSPALPLIEQIETIATQLRKELFEGVDEADLKVCMRVHGHILANLEKS
>Mature_143_residues
PLTDQHRFGMQLAQMSRGWRAELDRRLAGLGLSQARWLVLLHLARFEEAPTQRELAQSVGVEGPTLARLLDSLESQGLVQ
RQSVMEDRRAKKIVLCSPALPLIEQIETIATQLRKELFEGVDEADLKVCMRVHGHILANLEKS

Specific function: Transcription regulator that can both activate or repress expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081950, Length=120, Percent_Identity=39.1666666666667, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023071
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16262; Mature: 16131

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTDQHRFGMQLAQMSRGWRAELDRRLAGLGLSQARWLVLLHLARFEEAPTQRELAQSV
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GVEGPTLARLLDSLESQGLVQRQSVMEDRRAKKIVLCSPALPLIEQIETIATQLRKELFE
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHC
GVDEADLKVCMRVHGHILANLEKS
CCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLTDQHRFGMQLAQMSRGWRAELDRRLAGLGLSQARWLVLLHLARFEEAPTQRELAQSV
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GVEGPTLARLLDSLESQGLVQRQSVMEDRRAKKIVLCSPALPLIEQIETIATQLRKELFE
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHC
GVDEADLKVCMRVHGHILANLEKS
CCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA