| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457683
Identifier: 77457683
GI number: 77457683
Start: 1628065
End: 1628487
Strand: Reverse
Name: 77457683
Synonym: Pfl01_1456
Alternate gene names: NA
Gene position: 1628487-1628065 (Counterclockwise)
Preceding gene: 77457684
Following gene: 77457682
Centisome position: 25.29
GC content: 60.52
Gene sequence:
>423_bases ATGAACGAACGTGATCAGGTTCTGAAAGCGGCCGCCGATCTGGTGTCCGCCTTCGCCCGCAACGATCGCGAAGCCTACTT CGGCGCGTTCAGCGCCGATGCGAGCTTCGTGTTCTACACCCTCGAACAGCCCCTGCTGTCGCGCGATGCCTATCAGGCGT TGTGGGACAGCTGGCGCGCCGAGGATGGCTTCGAGGTGCTGTCCTGCACCTCGAGCAACGCCTTCGTCAGCCTGCAGGGT GACGTGGCGATTTTCATCCATGACGTGGCCACCGAGCTGCGCATGCAAGGGGAGCAACACTTCAGCCAGGAGCGCGAGAC GATTGTTTTCAAGAAACAAGCGTCGAGCCTAGAACAACAAGGCCATTGGCTGGCCTGCCACGAACATTTGTCCGCAATGC CGGAAGGGCTGCCATCCCCTTAG
Upstream 100 bases:
>100_bases GCTTATGACACCACCGGCAACACCTCGCTGCTGGCCGCCAACCTGCTGTACGAAATGCTCTGCGTACTGCCGGGCGTGGT CCACCGCTGAGGGTCGGGTC
Downstream 100 bases:
>100_bases CCAAGACAGGTGACGCTCACGCACGATGAGCGCGCCTTTATGATCGGAGCAGATCATGAATAACAACAACAAAGACCAAA GCCTTACGCAGATTGAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MNERDQVLKAAADLVSAFARNDREAYFGAFSADASFVFYTLEQPLLSRDAYQALWDSWRAEDGFEVLSCTSSNAFVSLQG DVAIFIHDVATELRMQGEQHFSQERETIVFKKQASSLEQQGHWLACHEHLSAMPEGLPSP
Sequences:
>Translated_140_residues MNERDQVLKAAADLVSAFARNDREAYFGAFSADASFVFYTLEQPLLSRDAYQALWDSWRAEDGFEVLSCTSSNAFVSLQG DVAIFIHDVATELRMQGEQHFSQERETIVFKKQASSLEQQGHWLACHEHLSAMPEGLPSP >Mature_140_residues MNERDQVLKAAADLVSAFARNDREAYFGAFSADASFVFYTLEQPLLSRDAYQALWDSWRAEDGFEVLSCTSSNAFVSLQG DVAIFIHDVATELRMQGEQHFSQERETIVFKKQASSLEQQGHWLACHEHLSAMPEGLPSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15748; Mature: 15748
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERDQVLKAAADLVSAFARNDREAYFGAFSADASFVFYTLEQPLLSRDAYQALWDSWRA CCHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCC EDGFEVLSCTSSNAFVSLQGDVAIFIHDVATELRMQGEQHFSQERETIVFKKQASSLEQQ CCCCEEEEECCCCCEEEECCCEEEEHHHHHHHHHHCCHHHHHHHHHHEEHHHHHHHHHHC GHWLACHEHLSAMPEGLPSP CCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNERDQVLKAAADLVSAFARNDREAYFGAFSADASFVFYTLEQPLLSRDAYQALWDSWRA CCHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCC EDGFEVLSCTSSNAFVSLQGDVAIFIHDVATELRMQGEQHFSQERETIVFKKQASSLEQQ CCCCEEEEECCCCCEEEECCCEEEEHHHHHHHHHHCCHHHHHHHHHHEEHHHHHHHHHHC GHWLACHEHLSAMPEGLPSP CCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA