| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yxlA [H]
Identifier: 77457682
GI number: 77457682
Start: 1626498
End: 1628009
Strand: Reverse
Name: yxlA [H]
Synonym: Pfl01_1455
Alternate gene names: 77457682
Gene position: 1628009-1626498 (Counterclockwise)
Preceding gene: 77457683
Following gene: 77457681
Centisome position: 25.29
GC content: 64.02
Gene sequence:
>1512_bases ATGAATAACAACAACAAAGACCAAAGCCTTACGCAGATTGAAACCCACGGGGTCGAACAGATCCCGGACAACGAACGCAC CGCCGGTCCCGTGGACTTGTTCCGCATGATCTTTGGCGGCGCGAATACCTTTGCCACCGCCGTGCTCGGCAGTTTCCCGG TGCTGTTCGGCCTGTCCTTTCAGGCGGGCGTCTGGGCGATTGTCTCGGGCGTGCTGCTCGGCTCGCTGATCCTTGCACCG ATGGGCCTGTTCGGCCCGCTCAACGGCACCAACAATGCCGTGTCGTCCGGTGCACATTTCGGCGTGCACGGGCGGATCGT CGGTTCGTTCCTGTCGCTGCTGACCGCCATCGCCTTCTTCTCGCTCTCGGTGTGGAGTTCGGGGGATGCGTTGATCGGTG GTGCGAAACGCCTGATCGGCCTGCCGGAAACCGACCTGACCCTGGGCCTGGCCTACGGTCTGTTCGCGATTCTGGTGCTG ACCGTGTGCATCTACGGCTTCCGCTTCCTGCTGTGGGTGAACAAGGTCGCGGTGTGGAGCGCGAGCCTGTTGTTCCTGCT GGGTATCTTCGCCTTCGCCGGCCCTTTCGATTCGCACTACGCCGGTACCGTCAGCCTCGGCCAGCCGGGCTTCTGGGCCG CGTTCATCGGCGCCGCGCTGGTGGCCATGAGCAACCCGATTTCCTTCGGCGCGTTCCTCGGCGACTGGGCCCGTTACATC CCGCGTGAAACCTCGCGTCAGCGGATCATGGCGGCGGTGATTTTCTCGCAGATCGCTACCTTCATCCCGTTCCTGTTCGG CCTGACCACCGCGACCATCGTCGCGATCCAGGCACCGGACTACATTGCGGCCAACAACTACGTCGGCGGTCTGCTGGCGG TGTCGCCGAGCTGGTTCTTCCTGCCGGTGTGCCTGATTGCGGTGATCGGCGGCATGTCCACCGGCACCACGTCGCTGTAT GGCACCGGGCTGGACATGTCGAGCGTGTTCCCGCGTCTGCTGTCACGGGTCAAGGCAACGTTGCTGATCGGCGTGCTGTC GATTGCCTTCATCTTCATCGGGCGCTTTGCGGCGAATCTGGTGCAGAGCGTGTCGACCTTCGCGGTGCTGATCATCACCT GCACCACCCCGTGGATGGTGATCATGATCATCGGCCTGGTGGTGCGTCGCGGCTTCTACTGCCCGGACGACCTGCAAGTG TTCACGCGCGGCGAGCAAGGCGGACGCTACTGGTTCAGCCACGGCTGGAACTGGCGCGGTCTGGGCGCGTGGATCCCGAG CGCGGCGGTCGGCCTGTGCTTCGTCAACCTGCCGGGGCAGTTCGTAGGTCCACTCGGTGAACTGGCCGGCGGCATCGACA TCAGCCTGCTGGTGACCCTCGGTCTGGCGTCGGTGATGTACCTGATGTTGCTGAGCCTGTTTCCGGAACCGGCGCTGGTC TACGGCCCGAAGGATCCCCGGAGCAAAGGCGCGCATGCGCCGGCTGAAGCGGCGCTGCGTCAGGCTGCCTGA
Upstream 100 bases:
>100_bases CACGAACATTTGTCCGCAATGCCGGAAGGGCTGCCATCCCCTTAGCCAAGACAGGTGACGCTCACGCACGATGAGCGCGC CTTTATGATCGGAGCAGATC
Downstream 100 bases:
>100_bases TAAACGAATCGCCTGTGGGGGTCAGCCTTCTCCCACAGTGTTCCACCCCATAAAAAAGACAATCGGAGACACGCCATCAT GGCTTTGGATTTATTCGTCG
Product: cytosine/purines, uracil, thiamine, allantoin permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MNNNNKDQSLTQIETHGVEQIPDNERTAGPVDLFRMIFGGANTFATAVLGSFPVLFGLSFQAGVWAIVSGVLLGSLILAP MGLFGPLNGTNNAVSSGAHFGVHGRIVGSFLSLLTAIAFFSLSVWSSGDALIGGAKRLIGLPETDLTLGLAYGLFAILVL TVCIYGFRFLLWVNKVAVWSASLLFLLGIFAFAGPFDSHYAGTVSLGQPGFWAAFIGAALVAMSNPISFGAFLGDWARYI PRETSRQRIMAAVIFSQIATFIPFLFGLTTATIVAIQAPDYIAANNYVGGLLAVSPSWFFLPVCLIAVIGGMSTGTTSLY GTGLDMSSVFPRLLSRVKATLLIGVLSIAFIFIGRFAANLVQSVSTFAVLIITCTTPWMVIMIIGLVVRRGFYCPDDLQV FTRGEQGGRYWFSHGWNWRGLGAWIPSAAVGLCFVNLPGQFVGPLGELAGGIDISLLVTLGLASVMYLMLLSLFPEPALV YGPKDPRSKGAHAPAEAALRQAA
Sequences:
>Translated_503_residues MNNNNKDQSLTQIETHGVEQIPDNERTAGPVDLFRMIFGGANTFATAVLGSFPVLFGLSFQAGVWAIVSGVLLGSLILAP MGLFGPLNGTNNAVSSGAHFGVHGRIVGSFLSLLTAIAFFSLSVWSSGDALIGGAKRLIGLPETDLTLGLAYGLFAILVL TVCIYGFRFLLWVNKVAVWSASLLFLLGIFAFAGPFDSHYAGTVSLGQPGFWAAFIGAALVAMSNPISFGAFLGDWARYI PRETSRQRIMAAVIFSQIATFIPFLFGLTTATIVAIQAPDYIAANNYVGGLLAVSPSWFFLPVCLIAVIGGMSTGTTSLY GTGLDMSSVFPRLLSRVKATLLIGVLSIAFIFIGRFAANLVQSVSTFAVLIITCTTPWMVIMIIGLVVRRGFYCPDDLQV FTRGEQGGRYWFSHGWNWRGLGAWIPSAAVGLCFVNLPGQFVGPLGELAGGIDISLLVTLGLASVMYLMLLSLFPEPALV YGPKDPRSKGAHAPAEAALRQAA >Mature_503_residues MNNNNKDQSLTQIETHGVEQIPDNERTAGPVDLFRMIFGGANTFATAVLGSFPVLFGLSFQAGVWAIVSGVLLGSLILAP MGLFGPLNGTNNAVSSGAHFGVHGRIVGSFLSLLTAIAFFSLSVWSSGDALIGGAKRLIGLPETDLTLGLAYGLFAILVL TVCIYGFRFLLWVNKVAVWSASLLFLLGIFAFAGPFDSHYAGTVSLGQPGFWAAFIGAALVAMSNPISFGAFLGDWARYI PRETSRQRIMAAVIFSQIATFIPFLFGLTTATIVAIQAPDYIAANNYVGGLLAVSPSWFFLPVCLIAVIGGMSTGTTSLY GTGLDMSSVFPRLLSRVKATLLIGVLSIAFIFIGRFAANLVQSVSTFAVLIITCTTPWMVIMIIGLVVRRGFYCPDDLQV FTRGEQGGRYWFSHGWNWRGLGAWIPSAAVGLCFVNLPGQFVGPLGELAGGIDISLLVTLGLASVMYLMLLSLFPEPALV YGPKDPRSKGAHAPAEAALRQAA
Specific function: Unknown
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 53448; Mature: 53448
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNNKDQSLTQIETHGVEQIPDNERTAGPVDLFRMIFGGANTFATAVLGSFPVLFGLSF CCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH QAGVWAIVSGVLLGSLILAPMGLFGPLNGTNNAVSSGAHFGVHGRIVGSFLSLLTAIAFF HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHH SLSVWSSGDALIGGAKRLIGLPETDLTLGLAYGLFAILVLTVCIYGFRFLLWVNKVAVWS HHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASLLFLLGIFAFAGPFDSHYAGTVSLGQPGFWAAFIGAALVAMSNPISFGAFLGDWARYI HHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC PRETSRQRIMAAVIFSQIATFIPFLFGLTTATIVAIQAPDYIAANNYVGGLLAVSPSWFF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEECCCCCCCEEEECCCHHH LPVCLIAVIGGMSTGTTSLYGTGLDMSSVFPRLLSRVKATLLIGVLSIAFIFIGRFAANL HHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQSVSTFAVLIITCTTPWMVIMIIGLVVRRGFYCPDDLQVFTRGEQGGRYWFSHGWNWRG HHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEECCCCCCCC LGAWIPSAAVGLCFVNLPGQFVGPLGELAGGIDISLLVTLGLASVMYLMLLSLFPEPALV HHHHHHHHHHHHEEECCCCHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE YGPKDPRSKGAHAPAEAALRQAA ECCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MNNNNKDQSLTQIETHGVEQIPDNERTAGPVDLFRMIFGGANTFATAVLGSFPVLFGLSF CCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH QAGVWAIVSGVLLGSLILAPMGLFGPLNGTNNAVSSGAHFGVHGRIVGSFLSLLTAIAFF HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHH SLSVWSSGDALIGGAKRLIGLPETDLTLGLAYGLFAILVLTVCIYGFRFLLWVNKVAVWS HHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASLLFLLGIFAFAGPFDSHYAGTVSLGQPGFWAAFIGAALVAMSNPISFGAFLGDWARYI HHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC PRETSRQRIMAAVIFSQIATFIPFLFGLTTATIVAIQAPDYIAANNYVGGLLAVSPSWFF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEECCCCCCCEEEECCCHHH LPVCLIAVIGGMSTGTTSLYGTGLDMSSVFPRLLSRVKATLLIGVLSIAFIFIGRFAANL HHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQSVSTFAVLIITCTTPWMVIMIIGLVVRRGFYCPDDLQVFTRGEQGGRYWFSHGWNWRG HHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEECCCCCCCC LGAWIPSAAVGLCFVNLPGQFVGPLGELAGGIDISLLVTLGLASVMYLMLLSLFPEPALV HHHHHHHHHHHHEEECCCCHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE YGPKDPRSKGAHAPAEAALRQAA ECCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]