Click here to switch to the map view.

The map label for this gene is yigM [C]

Identifier: 77457660

GI number: 77457660

Start: 1608006

End: 1608887

Strand: Direct

Name: yigM [C]

Synonym: Pfl01_1433

Alternate gene names: 77457660

Gene position: 1608006-1608887 (Clockwise)

Preceding gene: 77457659

Following gene: 77457662

Centisome position: 24.98

GC content: 62.81

Gene sequence:

>882_bases
ATGGGCTATCTACTTTTTGTCACGCTGATCCAGGCGTTTTCCTTCAGTCTGATCGGCGAATACCTGGCCGGTCATGTCGA
CAGCTACTTCGCGGTGCTGGTGCGGGTGGTGCTGGCCGGGCTGGTGTTTATCCCGCTGACCCGCTGGCGCTCGGTGGAGC
CGGCGTTCATGCGCGGCATGTTGCTGATCGGCGCGTTGCAGTTCGGCGTGACCTACGTCTGCCTGTATCTGAGCTTCCGC
GTGCTGACGGTGCCGGAGGTGCTGCTGTTCACCATCCTCACGCCGCTGCACGTGACGCTGATCGAAGACGCGCTCAACCG
ACGCTTCAACCCGTGGGCGCTGATCGCCGCACTGGTGGCCGTGTGCGGTGCTGCAGTGATTCGCTACGACCGGATCAACC
CGGACTTCTTCATGGGCTTTCTGCTGCTGCAACTGGCCAACTTCACCTACGCCGCCGGGCAGGTGCTGTACAAACATCTG
GTGGCGAAGCACCCGAGCGATCTGCCGCACTACCGGCGCTTCGGTTTCTTCTACCTCGGTGCACTGGCGGTGGCGCTGCC
GGCGTTCCTGCTGTTCGGCAAATCCAACTTCCTGCCGGAAGCGCCGCTGCAATGGGGCGTGCTGGTGTTCCTCGGCCTGG
TCTCGACCGCACTCGGTCTGTACTGGTGGAACAAGGGTGCGTGCCTGGTCAACGGCGGCACCCTGGCGGTGATGAACAAC
CTGCACGTGCCGGTGGGGCTGCTGCTGAATCTGCTGATCTGGAATCAGCACGAGGAGCTCGGGCGGTTGTTCCTCGGTGG
CAGCGTGATTCTGGCGGCGGTGTGGATCAGCCGGTTGGGGATTCGCCAGTCGGCGCCAATTGCTCCACCAGAAACGCGAT
AA

Upstream 100 bases:

>100_bases
CGATTGAACGCTTTAGCGAGATCGGGCTTTTTTTTGCCCGGGATTTAGCGATGGCCGGCAAAAAACGCTATCGTCGCCGC
CATTCGAAATCGAGGCGAGC

Downstream 100 bases:

>100_bases
ACGCCCGAGTCTTCTGCGGCACTCGTCGCGCTGACGAGTACACCGCGTTGATGGTGATCGCCGGCGCCTGCCATTCGCAC
AGCACCGGCACCAGTCGCCC

Product: carboxylate/amino acid/amine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MGYLLFVTLIQAFSFSLIGEYLAGHVDSYFAVLVRVVLAGLVFIPLTRWRSVEPAFMRGMLLIGALQFGVTYVCLYLSFR
VLTVPEVLLFTILTPLHVTLIEDALNRRFNPWALIAALVAVCGAAVIRYDRINPDFFMGFLLLQLANFTYAAGQVLYKHL
VAKHPSDLPHYRRFGFFYLGALAVALPAFLLFGKSNFLPEAPLQWGVLVFLGLVSTALGLYWWNKGACLVNGGTLAVMNN
LHVPVGLLLNLLIWNQHEELGRLFLGGSVILAAVWISRLGIRQSAPIAPPETR

Sequences:

>Translated_293_residues
MGYLLFVTLIQAFSFSLIGEYLAGHVDSYFAVLVRVVLAGLVFIPLTRWRSVEPAFMRGMLLIGALQFGVTYVCLYLSFR
VLTVPEVLLFTILTPLHVTLIEDALNRRFNPWALIAALVAVCGAAVIRYDRINPDFFMGFLLLQLANFTYAAGQVLYKHL
VAKHPSDLPHYRRFGFFYLGALAVALPAFLLFGKSNFLPEAPLQWGVLVFLGLVSTALGLYWWNKGACLVNGGTLAVMNN
LHVPVGLLLNLLIWNQHEELGRLFLGGSVILAAVWISRLGIRQSAPIAPPETR
>Mature_292_residues
GYLLFVTLIQAFSFSLIGEYLAGHVDSYFAVLVRVVLAGLVFIPLTRWRSVEPAFMRGMLLIGALQFGVTYVCLYLSFRV
LTVPEVLLFTILTPLHVTLIEDALNRRFNPWALIAALVAVCGAAVIRYDRINPDFFMGFLLLQLANFTYAAGQVLYKHLV
AKHPSDLPHYRRFGFFYLGALAVALPAFLLFGKSNFLPEAPLQWGVLVFLGLVSTALGLYWWNKGACLVNGGTLAVMNNL
HVPVGLLLNLLIWNQHEELGRLFLGGSVILAAVWISRLGIRQSAPIAPPETR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790261, Length=294, Percent_Identity=46.9387755102041, Blast_Score=260, Evalue=7e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32536; Mature: 32405

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYLLFVTLIQAFSFSLIGEYLAGHVDSYFAVLVRVVLAGLVFIPLTRWRSVEPAFMRGM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LLIGALQFGVTYVCLYLSFRVLTVPEVLLFTILTPLHVTLIEDALNRRFNPWALIAALVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VCGAAVIRYDRINPDFFMGFLLLQLANFTYAAGQVLYKHLVAKHPSDLPHYRRFGFFYLG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ALAVALPAFLLFGKSNFLPEAPLQWGVLVFLGLVSTALGLYWWNKGACLVNGGTLAVMNN
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECC
LHVPVGLLLNLLIWNQHEELGRLFLGGSVILAAVWISRLGIRQSAPIAPPETR
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GYLLFVTLIQAFSFSLIGEYLAGHVDSYFAVLVRVVLAGLVFIPLTRWRSVEPAFMRGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LLIGALQFGVTYVCLYLSFRVLTVPEVLLFTILTPLHVTLIEDALNRRFNPWALIAALVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VCGAAVIRYDRINPDFFMGFLLLQLANFTYAAGQVLYKHLVAKHPSDLPHYRRFGFFYLG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ALAVALPAFLLFGKSNFLPEAPLQWGVLVFLGLVSTALGLYWWNKGACLVNGGTLAVMNN
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECC
LHVPVGLLLNLLIWNQHEELGRLFLGGSVILAAVWISRLGIRQSAPIAPPETR
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]