| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457552
Identifier: 77457552
GI number: 77457552
Start: 1499172
End: 1499582
Strand: Reverse
Name: 77457552
Synonym: Pfl01_1325
Alternate gene names: NA
Gene position: 1499582-1499172 (Counterclockwise)
Preceding gene: 77457555
Following gene: 77457544
Centisome position: 23.29
GC content: 55.96
Gene sequence:
>411_bases ATGAAATTCGCAAAGATCTCCCAGACGCTGGCGCTCTGGGCCGGCAGTCCCAAGACGTTTATGGGGGCGTTGATTCTGAT CGGGCTCTGGGGGTTGAGCGGGCCGATTTTCGATTACAACGACACCTGGCAACTGATCATCAACACCTCGACCACGATTA TCACGTTCCTGATGGTGTTCCTGATCCAGAACACCCAGAACCGCGACACCGACATCCTGCATTTGAAACTTGATGAGTTG CTGCGGGTGAACAAGGAGGCGCAGAACGCGATGCTCGGGCTGGAGTCGCTGGATCTCAAGCAGCTGGAAGCGTTGCGTCG ACATTACCGGGCGATGGGCGAGAACGAGGTGTTTGACCTGGAAGGTCTGGGGGACAAGAGCAAGCCGAAGCAGGACCTGA ATGAATGCTGA
Upstream 100 bases:
>100_bases TGGAACAATCAAGTTTCAAAGACAGCAAGTCTCTGTAAGTAGAATTTTCCGCCCCCCTCCGATGTCTGAATTTCAAGCTC CCCCCACAAGGAAAACGGCC
Downstream 100 bases:
>100_bases CAGGCAAAAAAAAACGGCGCTAAAAAAGCGCCGTTTTCATTGCTGCGGATTCAGCGACTGGCCTGAAGGGCTCGGGCCAT TTCCAGATGACTCTGCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MKFAKISQTLALWAGSPKTFMGALILIGLWGLSGPIFDYNDTWQLIINTSTTIITFLMVFLIQNTQNRDTDILHLKLDEL LRVNKEAQNAMLGLESLDLKQLEALRRHYRAMGENEVFDLEGLGDKSKPKQDLNEC
Sequences:
>Translated_136_residues MKFAKISQTLALWAGSPKTFMGALILIGLWGLSGPIFDYNDTWQLIINTSTTIITFLMVFLIQNTQNRDTDILHLKLDEL LRVNKEAQNAMLGLESLDLKQLEALRRHYRAMGENEVFDLEGLGDKSKPKQDLNEC >Mature_136_residues MKFAKISQTLALWAGSPKTFMGALILIGLWGLSGPIFDYNDTWQLIINTSTTIITFLMVFLIQNTQNRDTDILHLKLDEL LRVNKEAQNAMLGLESLDLKQLEALRRHYRAMGENEVFDLEGLGDKSKPKQDLNEC
Specific function: Unknown
COG id: COG5478
COG function: function code S; Predicted small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15470; Mature: 15470
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFAKISQTLALWAGSPKTFMGALILIGLWGLSGPIFDYNDTWQLIINTSTTIITFLMVF CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHH LIQNTQNRDTDILHLKLDELLRVNKEAQNAMLGLESLDLKQLEALRRHYRAMGENEVFDL HHHCCCCCCCEEEEEEHHHHHHHCHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCCCEEEC EGLGDKSKPKQDLNEC CCCCCCCCCHHHHCCC >Mature Secondary Structure MKFAKISQTLALWAGSPKTFMGALILIGLWGLSGPIFDYNDTWQLIINTSTTIITFLMVF CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHH LIQNTQNRDTDILHLKLDELLRVNKEAQNAMLGLESLDLKQLEALRRHYRAMGENEVFDL HHHCCCCCCCEEEEEEHHHHHHHCHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCCCEEEC EGLGDKSKPKQDLNEC CCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA