| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457544
Identifier: 77457544
GI number: 77457544
Start: 1492729
End: 1493217
Strand: Reverse
Name: 77457544
Synonym: Pfl01_1317
Alternate gene names: NA
Gene position: 1493217-1492729 (Counterclockwise)
Preceding gene: 77457552
Following gene: 77457539
Centisome position: 23.19
GC content: 64.42
Gene sequence:
>489_bases ATGGGAACGATGCAGTGGGTCGGATGGCTGCTGTTGGCGGTATTCGCCGGGGCGGTGGTGCCGTTTCAGAGTGCGATCAA CATCAATCTGGCGCGGGGGTTGGGGCATCCGCTGTGGGCGACGTTCACCTCGCTGGTGGTGAGCGTGCTGGTGCTTTTGC CGGTGATTGTCGCCCTGCGCCTGCCGTTGCCGTCGCTGGCCCTCGCCAGCAAGCTCCCGTTGTGGATGTGGACCGGCGGC GCGTTCGGGGTGTGCTTCGTCGCATTGGCGGTGGTGTTGCTGCCGAAGCTGGGGGCTTCGGGATTTCTGGCGCTGGCTTT GGCCGGGCAAATGATCACGTCAATCGTGCTGGATCATTTCGGCCTGTTCGGGCTGGTGGAGAAACATCTGACGTTGCCAC GCCTGTTCGGCGCGCTGTCGTTGATGGCGGGAGTGGTGCTGATCCAGTTTGGTGACTCGGCCGCCAGGTCCCTGGCACCG GCGGGCTGA
Upstream 100 bases:
>100_bases CAAATCATTCATTCGATGCATGTTCCGGATACCAAAACAGAATTTAAATCTGCTCGACGAATACCCTAGAGTCCAGCAAA ACCTTTGCCGGAGAACGATC
Downstream 100 bases:
>100_bases TCGTTCGCGTGATCGGAACGACCAGCCCGCAACCTCAGTACTTGTCGAGTGTGCGCAATTTCTGCGGCAGCCCCCACAGC AGCAACGCCGCCGCGATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MGTMQWVGWLLLAVFAGAVVPFQSAININLARGLGHPLWATFTSLVVSVLVLLPVIVALRLPLPSLALASKLPLWMWTGG AFGVCFVALAVVLLPKLGASGFLALALAGQMITSIVLDHFGLFGLVEKHLTLPRLFGALSLMAGVVLIQFGDSAARSLAP AG
Sequences:
>Translated_162_residues MGTMQWVGWLLLAVFAGAVVPFQSAININLARGLGHPLWATFTSLVVSVLVLLPVIVALRLPLPSLALASKLPLWMWTGG AFGVCFVALAVVLLPKLGASGFLALALAGQMITSIVLDHFGLFGLVEKHLTLPRLFGALSLMAGVVLIQFGDSAARSLAP AG >Mature_161_residues GTMQWVGWLLLAVFAGAVVPFQSAININLARGLGHPLWATFTSLVVSVLVLLPVIVALRLPLPSLALASKLPLWMWTGGA FGVCFVALAVVLLPKLGASGFLALALAGQMITSIVLDHFGLFGLVEKHLTLPRLFGALSLMAGVVLIQFGDSAARSLAPA G
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16897; Mature: 16766
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTMQWVGWLLLAVFAGAVVPFQSAININLARGLGHPLWATFTSLVVSVLVLLPVIVALR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LPLPSLALASKLPLWMWTGGAFGVCFVALAVVLLPKLGASGFLALALAGQMITSIVLDHF CCCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GLFGLVEKHLTLPRLFGALSLMAGVVLIQFGDSAARSLAPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC >Mature Secondary Structure GTMQWVGWLLLAVFAGAVVPFQSAININLARGLGHPLWATFTSLVVSVLVLLPVIVALR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LPLPSLALASKLPLWMWTGGAFGVCFVALAVVLLPKLGASGFLALALAGQMITSIVLDHF CCCCHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GLFGLVEKHLTLPRLFGALSLMAGVVLIQFGDSAARSLAPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA